Oncorhynchus nerka (sockeye salmon): 115134401
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Entry
115134401 CDS
T07952
Name
(RefSeq) synaptic vesicle glycoprotein 2B-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115134401
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115134401
Transporters [BR:
one02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
115134401
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LD_SV2
Sugar_tr
MFS_1
Pentapeptide_4
DUF6029
Motif
Other DBs
NCBI-GeneID:
115134401
NCBI-ProteinID:
XP_029524184
LinkDB
All DBs
Position
LG9a:29175212..29222450
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AA seq
688 aa
AA seq
DB search
MADPYQNNVYHQGGGDPYGTYGEGGDQGGYGYQGESYPQEEDAASDATEGHDDEDQMYEG
EYQGIPHPDEVKAAQRAARAKARQAQAGATELEELAEQYEDIMEDCGHGRFQWTLFIVLG
LALMADGVECFVVGFVLPSAEKDMCLSNGEKGMLGLIVFLGMMVGAFIWGGMADKLGRRK
CLIWALTVNCVFAFLSSFAQGYGFFLFFRLFSGIGIGGSVPIVYSYFSEFLQMDKRGEHL
SWLCMFWMVGGIYASFTAWGIIPRYGWGFSMGTEFQFHGWRVFVLVCALPAITSLVGLMF
MPESPRFLLENAKHDEAWMILKNVHDTNWRAKGQPEKVFQVTHIKAPKTNEDEFIEIQSA
TGTAIQRWAVRTLTLCKLMLRNVASLLGPELRLSTLFMAIIWFTMAFSYYGLGVWFPDMI
KYLQQEEYESKVKVFHRERVERFHFNFSLENQIHREGEYINDKFINIEMKSVKFEDSLFE
DCYFEDIKSTETMFENCTIRSTVFYNTDLYEEKFIDCKLENTTFLHNKKGCHLDIDEEND
VLIYLVSFLGSLAVLPGNIISALFMEKIGRVKIIGLSMLISAGCTFFLFLSFSQAAIIAW
QCLFCGVSVAAWNGIEVITVELYPASKRATAFGVLNALCKLAAILGSSIFASFVGVTKVV
PILLSCAALVCGGLVALKLPETREKILQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccttaccagaacaacgtgtaccaccaaggaggaggtgacccctacggcacc
tacggagagggaggagaccaggggggctacggttaccagggcgagtcctaccctcaggag
gaggacgcagccagcgatgccacagagggccatgatgacgaggaccagatgtacgagggg
gagtaccaggggatcccccaccctgacgaggtgaaggcggcccagagagcagcgagggcc
aaggccaggcaggctcaggcaggggccacggagctggaggagctggctgagcagtatgag
gacatcatggaggactgtgggcatggacggttccagtggaccctgtttatagtgctgggt
ctggccctcatggctgatggggtggagtgctttgtggtggggttcgtgctgcccagcgcg
gagaaggacatgtgcttatccaatggagagaaaggcatgctaggtttgatagtgttcctg
ggcatgatggttggggcgttcatctggggtggaatggcagacaaactgggccgccggaag
tgtctgatctgggccctcaccgtcaactgtgtcttcgccttcctctcctcctttgcccag
ggatacggcttcttcctcttctttaggctcttctctggcatcggcatcggaggctctgtc
cccatagtctactcctacttctcagagttcctgcagatggataagagaggggaacacctg
agctggctgtgtatgttctggatggtggggggcatctacgcctccttcactgcctggggc
atcatccctcgctacggctggggcttcagcatggggacagagttccagttccacggctgg
agggtgtttgtgctggtctgtgccctgcctgccatcacctccctggtggggctcatgttc
atgcctgagagccccaggttcctcctggaaaatgccaaacatgacgaggcctggatgatc
ttgaagaatgtccatgacaccaactggagggctaagggccagcctgagaaggtcttccag
gtgacccacatcaaagctcctaagaccaatgaggatgagttcattgagatccagagtgcc
acagggacggctatacagcgatgggccgttcgaaccctcactctgtgcaaactgatgctg
aggaacgttgcttctctcttgggacctgagctgagactgagtacgctgttcatggccatc
atctggttcaccatggccttcagttactatggactgggtgtgtggttccctgacatgatc
aaatacctgcagcaagaggagtatgagtccaaagtcaaggtgttccatagagagagagtt
gaacgcttccacttcaacttctccctggagaatcagatccacagagagggagaatacatc
aatgacaagttcatcaacatagagatgaagtctgtaaagtttgaggattcactgtttgaa
gattgttattttgaggacatcaagtccactgaaacaatgtttgagaactgcaccatcaga
tccaccgtcttctataacacagacctgtacgaggagaagttcatagactgtaagctggag
aacaccacgttcctccacaacaagaagggctgtcacctggacatcgacgaggagaacgac
gtgcttatctacctggtcagcttcctggggtccctggctgttctccccggcaacatcata
tcagctctgttcatggagaagataggcagggtcaaaatcataggcctctccatgctaatc
tcagctgggtgcaccttcttcctgttcctgagcttcagtcaggcggccatcatagcctgg
cagtgtctgttctgtggggtcagcgtggcagcatggaacggcatcgaggtcatcacagtg
gaactctacccagcctccaaaagagccacagcgtttggggtgttgaatgccctgtgtaaa
ctggctgctatcctgggtagctccatctttgcctcctttgtgggggtcaccaaagtcgtc
cccattctcctctcctgcgctgctctggtgtgcggaggcctggttgccctcaagctacct
gagaccagggagaagatcctccagtga
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