Oncorhynchus nerka (sockeye salmon): 115134415
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Entry
115134415 CDS
T07952
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115134415 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115134415 (tubgcp6)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
115134415 (tubgcp6)
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
115134415 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
115134415
NCBI-ProteinID:
XP_029524209
LinkDB
All DBs
Position
LG9a:complement(30106528..30140452)
Genome browser
AA seq
1974 aa
AA seq
DB search
MYSSPDVCLKSGSHNSSSNSNSITELLGSLCDSSLTGVSWKRRALGGVSREGVRRTLRKR
AYGALLSKLFQEGSPKGFLSVPSATSTTPPRNKLLMISFDLRVAGCQDEAERLEEQLGRL
SEGPASGLKELDSVLELLVQLTGSAPPPPASFSRDYMRRERPVLRRPPLGGYQSEELQRL
EARAWALMCGEEWGSLKGLCGTLGLMDAPPGTGLLALRRRSDVEERFEKETRMSLFGALQ
HSRTSDLDIRLNLPPVPSNADVTGLAIRVPPCLDQLEDEGFQSASNLTPDSQSEPSPSPE
LDVWDALRTFEPGRRRCWESVGCPPGKREFPYLTEGGREAFDQLYRLWEGEMRVVCSASP
SPLLPLPLDCQTQLVSDLLNVLIGVASTTFPLNQVCVNFDVRPGVCVSGASPESVSRLLG
ELAQYGTHYLRLSRFVLQSAQKRGLVFQAFTGGLRKYLHYYRACVLSTPPTLSLLTIGFL
FRKVGRQLRYLSELCCVDGASGVGQATFPVGVTLLSYLYNEAQSNCSNENYPVLLSLLKS
SCEPYTRFVSDWVYSGVFRDVYGEFMIQVNEDYLSFRDKHFWAQGYTLISRDVEDCVPVF
LRHIANDVYVCGKTINLLKICCPQHYICWSELPVPRIAVTFSLQEVEEIERDCAVYRGRM
ERIAKHSATSREEQALRTEQARQELINQVRQSAAKTLESIRGRQVSQRLAEEAKKRERFE
ELRQHLEQEQEWHSLARRKEQEDEFSFARELRDREKRLQALEEQLEIRARKELIAQYSHL
SEEAAKREWRAMWRVQRMRLDDSRAQFLQQDQQETEAILEKYPVGGQRPPLEILQPAPAQ
TTQPLTQESLSPEPCEQQSEEPTQAPLHHQSTPPALPTTKLDLTLVTEHIDANDLPKPAD
SLQVDQALQEIGSDLPEALAPHKPVDYDFSAPYSPLEGVTAPALARPRWGPVVQPDVAHP
HIPTGPPGSTLGMGCVVSGTLALPSPLPGSTYGHSSDSTMGVGCVVSGAEVLPRPSPHGQ
ASQSSIPLGQYFTDVPLALHTANVHGHPSQTTVQLVDGSESKQMDSRQENTEDPSPPGCI
VKEAEGTVEASCLVEMKPAEMEKLDCVGAEEQMAGSLREASASSTPEQGHDSGYHPGQAS
PSLSGPSSVYELPTANSQGHASDAHIKVGEHVSDVEVPLPSQNVHGHSSDANIKVGEFVS
EVTAPLPTANVHGHSSDANIKVGEFVSEVTAPLPTANVHGHSSDANIKVGEFVSEVTAPL
PTANVHGHASDAHIKVGDHVSEVVASLFTQNIHGHASDSHIKVGEHMSEEVASIHTQNIH
GHSSNTHFKAGEFVLDAEPSRPRWSKHGHASDCTLQVGCVMSGTEPVLSPLPGSTYGHSS
ESTLGIGCVVSGVEPLHAPLPGSDFGHATDSTLGGGCVVSGTVTLPSPIPGSDYGHSSDS
AMGGGCVISGIEPVRPPLPGSNFGQSSDSTLGTGCVVSGVSPLPSPIPGSIYGHSSDSAL
GGGCKVSGVNPLPSPIPGSIYGHSSDSALGGGCKVKETGNEYDARTLEQQRLAEGISSWA
AGLALSPGESSEREYLRSLAAQYQVEQYEDCYGLMTLAPECHPLHQVTRGPWGLPVDPSL
RRATDTTVVQLSGMVSLPVLMKHSVTTPLITHVSLVNKAVVDYYFVELGVERHFEALRHF
LLMEDGEFAQSLSDLIFEKMGSGQTPGELLTPLVLNSILSKALQYSLHGDSSLAPNFTFA
LRFLPETFHPHAPDALNCLELRYKVDWPLNIIITDSCMNKYNRLFSFLLQLKHMVWSLRD
VWFHLKRTALVKGAGRSVQFRQLQLYRHEMQHFVKVIQGYIANQILQVSWLEFTTKLASA
SDLDAIHRTHADYLNRAIFRGLLTEKAAPVMNIIHSIFSLILKFRAQLIAQPWDSQQGEA
VHPSFIAMQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYKDS
NT seq
5925 nt
NT seq
+upstream
nt +downstream
nt
atgtactccagtccagatgtctgccttaaatctggcagtcacaacagtagcagtaacagc
aacagcatcactgaactcctgggctccctgtgtgacagcagcctcactggggtgtcatgg
aaacgtcgtgctctaggaggggtgtctcgagagggggtccgccgcactctcagaaagcgt
gcctatggggccctgctgtccaaactgttccaggagggctccccgaaagggttcttgtca
gtacctagtgccacgtccaccaccccgcccagaaacaagctacttatgatatcctttgac
ctgcgagtggcggggtgccaggacgaggccgagaggctggaggagcagctggggaggcta
agtgaggggcccgcctcgggtctgaaggagctggactctgtgctggagctcttggtgcag
ctgactggctctgcacccccacccccggcctcattcagcagggactacatgcgcagggag
aggcccgtgttgaggaggcctccactggggggctaccagagcgaggagctgcagaggttg
gaggcccgagcctgggccctgatgtgtggggaggagtggggatccctgaagggtctgtgt
gggactctgggtctgatggatgctcctccgggcacaggcctgctggcactgaggaggagg
tccgacgtagaggagaggtttgagaaggagaccaggatgtctctgtttggagccctgcaa
cactcccgtacctcagacctggacatcaggctcaatctgcctcctgttcccagcaatgct
gatgtcactgggctagccatacgggtgccaccttgtttggaccagttagaagatgagggc
ttccagtcagcctccaacctaaccccagactcccagtcagagcccagtcccagcccagaa
cttgatgtctgggacgccctgaggacttttgagcctgggagacgccgctgctgggagtct
gttggctgcccaccagggaagagggaattcccctacctgacggagggaggcagggaggct
tttgatcagctctacaggctgtgggagggggagatgagggtggtatgctctgcctccccc
tcgcccctcctgcccctgcctctggactgtcagacccagctggtcagtgacctacttaat
gtattgatcggggtggcgtctactaccttccccctcaaccaggtgtgtgtcaattttgac
gttcgacccggagtgtgtgtgtcgggagcgtcaccggagagtgtgtctcgtttgcttggc
gagctggctcagtatggcacccattacctgaggctcagtcgcttcgttctgcagagtgcc
caaaagagaggcctggtcttccaggcgtttacaggtggactgcgtaagtacctgcattac
taccgggcctgtgtcctcagcacccctcccacccttagcctgctcaccatcggcttcctg
ttccgcaaggtgggccggcagctcaggtatttgtcagagttgtgctgtgtggatggggca
tctggtgtgggccaggctaccttccctgtgggtgtgacgctgctctcctacctgtacaac
gaggcccagagcaactgcagcaatgagaactaccccgtgctgctgtccctactgaagagc
agctgtgagccttacacacggtttgtgtcagactgggtgtacagtggagtgttccgggac
gtgtacggagagttcatgatccaggtcaacgaagactacctcagcttcagagacaagcac
ttctgggcgcagggctacacactgatctcccgtgatgtggaggactgcgtgcctgtcttc
ctccgacacatagccaacgatgtgtacgtctgcgggaagaccatcaacctgctcaagatc
tgctgtccccagcattacatctgctggtcggagctgcccgtgcctcgcatcgctgtcacg
ttctccctgcaggaggtagaggagatagagagggactgtgccgtgtaccgaggacgcatg
gagaggatcgccaagcacagcgccaccagcagggaggaacaggccctgcgcacagagcag
gcacgccaggaactgatcaatcaggtcaggcagtcggccgccaagaccctggagagcatc
cgcgggcgccaggtgtcgcagcgtctggctgaagaggcaaagaagagggaacgctttgaa
gagctgagacagcacttggagcaggaacaagagtggcacagtttagccaggaggaaggag
caggaggatgaattcagctttgccagggagctgagagaccgagagaagcgactacaggcc
ctggaggagcagctggagatccgagccaggaaggaactgattgcccagtacagccaccta
tcagaggaggcggccaagagggagtggcgggccatgtggcgggttcagcgaatgagactg
gacgattcccgggcccagttcctacagcaagaccaacaggagactgaggctattctggag
aagtatcctgtcggagggcagagaccccctctggaaatactacagccagctccagctcag
accactcaaccattaacacaggagtccctatccccggagccctgtgagcagcagtctgag
gagccaacccaggccccccttcaccaccaatccactcccccagcactccccaccacgaaa
ctcgacctcaccctcgtcacagagcacatcgacgccaatgacttgcccaagccggccgac
agcctgcaagtggaccaggccctacaggaaattgggtcggacctcccggaggctcttgcg
cctcataaacccgtagactatgactttagcgccccctacagtccccttgagggagtgacg
gccccggccctggctagacctcgctggggtcctgtggtacagccagacgtggctcaccct
cacatcccaaccggtccccctgggtccactctaggcatggggtgtgtggtgtccgggact
ttagctctcccgtctccgctacccggaagtacctacggccattcttcagactccactatg
ggtgtagggtgtgtggtgtcaggagctgaggtcctccccaggcccagtcctcacggccag
gcctcccaatctagcatccccctgggccagtacttcactgatgtgcccctggctctccac
acagccaatgtccacggacacccctcccagaccacagtgcaactggtggatggaagtgag
tcaaagcagatggacagcaggcaggagaataccgaagacccatcacctccagggtgcatc
gtaaaagaggctgaagggactgtagaggcatcatgcctggtggagatgaagccagctgag
atggagaaactagattgtgttggagcagaggaacagatggctggttctctcagggaggct
tctgcctcctccaccccagagcagggccatgacagtgggtatcacccaggacaggcctcc
ccttccctctctggaccctccagtgtgtacgagcttcctactgccaacagccaaggccat
gcctcagatgctcatattaaagtcggagagcacgtttcagatgtggaagtccctctccct
tctcaaaacgttcacggtcactcatctgatgctaacataaaggtaggagagtttgtttcg
gaggtgactgctcctcttccgaccgccaacgttcacggtcactcatctgatgctaacata
aaggtaggagagtttgtttcggaggtgactgctcctcttccgaccgccaacgttcacggt
cactcatctgatgctaacataaaggtaggagagtttgtttcggaggtgactgctcctctt
ccgaccgccaacgttcacggtcacgcatctgacgctcatattaaagttggagaccatgtt
tcagaagtggtcgcctcccttttcacccagaacattcacggtcatgcctcggactctcac
atcaaggtcggggagcacatgtcagaagaggtcgcctccattcacacccaaaacatccac
ggtcactcatccaacactcacttcaaggcgggtgagtttgtgttggacgcagagccctcc
cgaccacgctggagcaagcatggtcacgcctcagactgcacacttcaagtaggctgtgtg
atgtccggcacagaaccagtactctcccctttacctggtagcacctacggccattcctcg
gagtccacactaggtatagggtgtgttgtctctggggttgaaccccttcatgctcctcta
cctggaagtgactttggacacgccacagactcaaccctgggtggagggtgtgtggtgtca
ggaacggtaacccttccttctccgatacccggaagtgactacggccattcgtcagattca
gcgatgggcggagggtgcgtgatatctgggattgaacccgttcgccctcctcttccaggc
agcaacttcggacagtcctcagactccacactgggcacagggtgtgtggtgtcgggtgta
agccctctgccctcccccatccctggcagtatctacggccacagctcagactctgccctg
ggagggggctgtaaggtgtcaggtgtaaaccctctgccctcacccatccctggcagtatc
tacggccacagctcagactctgccctgggagggggctgtaaggtgaaggagactggtaat
gaatacgacgccaggaccctggagcagcagcggctggcggagggcatctcgtcctgggca
gcaggcttagctctgtccccaggcgagagctcagagagggagtacctccgctccctggct
gctcagtaccaggtggagcagtacgaggactgctacggtctcatgacgttggccccagag
tgtcaccccctgcatcaggtgacgcggggcccctggggcctcccggtggacccatcgctc
cgcagggccacagacaccacggtggtgcagcttagtgggatggtctccctgcccgtcctc
atgaagcactctgtcaccaccccactcatcacacatgtgtccttggtgaacaaggcggtg
gtggactactacttcgtagagcttggagtggagaggcattttgaggccctcaggcacttc
ttgctcatggaggacggggagttcgcccagtctctcagtgacctgatctttgaaaagatg
ggcagtggtcagactcctggagagctgttgactcctctggtcctgaactccatcctgagt
aaggctcttcagtacagtcttcatggagacagttctctggcccctaacttcaccttcgcc
ctgcgcttcctcccggagaccttccatcctcacgcccccgacgcactcaactgcctggag
ctacggtacaaggtggactggccgttgaacatcataatcacagacagctgtatgaacaag
tacaaccgtctgttctccttcctgctgcagctcaaacacatggtgtggagcctcagagac
gtctggtttcacctcaagaggactgcgctggtgaaaggggcgggccgctcggtgcagttc
cgccagctgcagctgtacagacacgagatgcaacactttgtgaaggtgatccagggttac
atcgctaaccagatcctgcaggtgtcctggttagagttcaccaccaagctggccagtgcc
tcggacctggacgccatacaccgcacacacgccgactacctcaacagagctatcttcagg
ggtctgctgacagagaaggcagctccagtcatgaacatcatccacagtatcttcagcctg
atcctgaagttccgggcccagctgatcgcacagccctgggacagccagcagggggaggca
gtgcaccccagcttcattgccatgcagcagtcatacaacactttcaaatactactcccac
ttcctcttcaaagtggtgaccaagctggtgaaccgaggatatcagcctcacctggaggac
ttcctgctccgcatcaacttcaacaactactacaaagactcctga
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