Oncorhynchus nerka (sockeye salmon): 115134451
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Entry
115134451 CDS
T07952
Symbol
cacna2d4
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04260
Cardiac muscle contraction
one04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115134451 (cacna2d4)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115134451 (cacna2d4)
04261 Adrenergic signaling in cardiomyocytes
115134451 (cacna2d4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115134451 (cacna2d4)
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115134451 (cacna2d4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
dCache_1
VWA_3
VWA
VWA_2
CobT_C
dCache_2
Zn_ribbon_5
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
115134451
NCBI-ProteinID:
XP_029524291
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Position
LG9a:complement(32441300..32511277)
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AA seq
1208 aa
AA seq
DB search
MSSSGDTVGPYRMGLLPRADTVGPGRMGLGPRADTVGPGRMGQGPRADTVGPGRMGLGPK
PDTVDPGRMKLGPRADTVGPGRMGLGPRADTVDPYRMGLGPRAEPGGVTNRLGPRGTPAG
LRLGLWILCFSWFCFTAHAQMKIPPETVQDWANVLSVQLREATTRYSGANILQKKFRDVE
SIIKIVDIDGRAQVRDFSEDIERMLGSKMKSVKRLAESAEDADLYHEFNKTLRFDYYNSM
LVNTMDDDGNFIELGGEFPLEENEHFNNIPVNTMQSDIQVPTNVYNKDPYILNGIYMSEA
LNDVFANNFKKDPTLTWQYFGSSSGFFRIYPGIKWTPDSNGVAAFDCRNRNWYIQAATSP
KDIIIVVDISGSMKGLKMTIAKHTINTILDTLGENDFVNVIAYTDYVRYVEPCFQGTLVQ
ADLDNREHFKVLVDDLHVKGEGKVAKAMKESFKILNEAATKGQGSLCNQAIMLITDGAME
DFKEVFEEFNWPDRRVRLFTYLIGREMTFADNTKWIACNNKGYYTHISTLADVQENVMEY
LHVLSRPMVINHNHDIIWTEAYMDSVLFATKAQSLLLMTSVAMPVFSKKKETLSHGILLG
VVGSDIPLLEVMKLAPRYRLGPHGYAFLITNNGYILAHPDLRPLYKDGKKLKPKPNYNSV
DLAEVEWEDIDETLRTAMVKGETGTLSLNVRASVDKAKRPMFLTNDYFYTTINDTPFSFG
MVLTRGHGQLMFMGTVSVEEGLHDLTSPDLSIAAEWTYCETDIDPHHRKYSQLQAVIRYL
QGKEPDLECDEVLLQQTLFDAVVTAPLEAYWQAIMLNASGMEAGVETAFLGTRSGIIRLT
RYTGMETRVAKKFLTPADKDNLFTMDHFPLWYRLAMENPPGRFLYYMPVEDNDKTGASKY
VIAVTAVTVSSGGKTAMAGAIGVQMSLEMLEKRLWAITFQPNDTDCTEVEGVCPLTCQSI
DVNCFLVDSNGFIIVSKERSEVGRFFGEVDGSVMTALITSGMFKQVSLYDYQGMCRSGHS
HSSSARPLLSPFYGLAAVIKWFFSHMLMFLMEFNFCGLWHSDYIVDAKAGYHTSHKAKKV
DALQPCDTEYPGFVYDSSIRETNSLIKCGRCQKMFVVQAVPESNLVLMVVQADCDCSRQY
SSITLEPKEVKYNASVKCNRMKSQKVRRRPNSCHAYHPKENAKDCGGASEISLSVAVFLT
SLATSLAL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcaggcgacacagtgggcccttacaggatgggactactacccagggctgac
acagtgggcccaggcaggatgggactaggacccagggctgacacagtgggcccaggcagg
atgggacaaggacccagggctgacacagtgggcccaggcaggatgggactaggacccaag
cctgacacagtggacccaggcaggatgaaactaggacccagggctgacacagtgggccca
ggcaggatgggactaggacccagggctgacacagtggacccttacaggatgggactagga
cccagggccgagccaggtggagtaacgaacaggctgggacccagagggactccagcgggg
ctgaggctgggcctgtggatcctgtgtttcagctggttctgcttcactgctcacgctcag
atgaagataccacctgagacggtccaagattgggcaaatgtcctttcagtgcaactacgc
gaggctaccacaagatattcgggagctaacattctgcaaaagaaattcagagatgtagag
tccattatcaagatagtggacatcgatgggagagcccaagtgagggacttttcagaggac
atagagagaatgctggggtccaagatgaagtccgttaagcggttggctgagtctgcggag
gatgcagatttgtaccacgagttcaacaaaactctacggtttgactactataactccatg
ctggtgaacacaatggatgacgatggtaacttcatagagctgggtggggagtttcctctg
gaggagaatgagcatttcaacaacatcccagtcaacacaatgcagagtgacatacaggtc
cccaccaatgtctacaacaaagatccctacatcctcaatggaatctacatgtcggaagct
ttgaatgacgtgttcgccaataacttcaagaaagaccccaccctcacctggcagtacttt
ggcagctcctcgggtttcttcagaatctaccctggtatcaaatggactccagattcaaat
ggtgtggctgcttttgactgcagaaaccgtaactggtatattcaggctgccacctcacca
aaggacattatcattgtggtggacatcagtggcagtatgaaaggcttgaagatgaccatt
gccaaacacaccatcaacaccatcctggacacgctgggggagaacgactttgtcaacgtc
attgcttacactgactacgtgcgctacgtagagccctgcttccaaggcactctggtgcag
gctgatttggacaaccgtgagcattttaaggtgctggtggacgacctgcatgtgaaggga
gagggtaaagttgcgaaggccatgaaggaatcgttcaaaatcttgaacgaggcagcgacc
aagggccaaggcagcctgtgcaaccaggccatcatgctgatcacagatggagccatggag
gacttcaaggaagtgtttgaagagttcaactggcctgatcgcagggtgcggctcttcact
taccttataggcagagagatgacctttgcagacaacaccaagtggatagcctgcaacaat
aagggttactacacacacatctccactctggctgacgtacaggagaatgtcatggaatac
cttcatgtcttgagtcgaccaatggtcatcaatcacaatcatgacatcatctggacggag
gcctacatggactctgtgctctttgccacaaaggctcaaagtttacttctcatgacctcc
gtggcaatgcctgtcttcagcaagaagaaagagacgctgtctcatgggattctgctgggt
gtggtgggttctgacatccctctgctggaggtcatgaagctggctcccagatataggctg
ggtccacatggttacgccttcctcatcaccaacaacggttacatcctggcacaccctgac
ctgcgacctctttataaagatggtaagaagctgaagcccaagcccaactacaacagtgtg
gacctggctgaggtggagtgggaggacatagatgagacactaaggacagccatggtgaaa
ggggagacaggcactctgtccttaaatgtgagagcatcagtggacaaagcgaaaaggcct
atgttcttaacaaatgactatttctacacaaccatcaacgacaccccattcagttttggt
atggtgctgaccaggggtcacggacagctgatgttcatggggacggtctctgtggaagag
ggcctgcatgacctgacgtcccctgatctatccatagccgctgagtggacatactgtgag
acagacattgaccctcaccaccgcaaatactctcagctccaggctgtcattcgctacctg
caggggaaggagcctgacctggagtgtgacgaggtgctgctgcagcagaccctgtttgat
gctgtggtgacagcccccttagaagcctactggcaggcaataatgctcaatgcatctggg
atggaggcgggtgtggagacagccttcctgggaactcgctctggcatcatccggctgacc
agatacaccggcatggagaccagggtcgccaagaagttcctgactccagcggataaggac
aacctgttcaccatggaccacttccccctgtggtaccgtctggccatggagaaccctccc
ggaagattcctctactacatgccggtggaggacaacgacaagacaggggcgtcgaagtat
gtcatagctgtcacagctgtgactgtgtcatcgggaggcaagacagccatggctggagcc
atcggggtgcagatgtccttggaaatgctggagaagaggctatgggccattacctttcag
cccaatgacacagactgtactgaagtggaaggtgtctgccctctcacctgtcaaagcatt
gatgtcaactgtttccttgtggacagcaacggtttcatcatagtctcgaaagagaggtca
gaggtcggacgtttctttggggaagtggatgggtctgtgatgacagcattgatcacgtca
ggcatgttcaagcaggtgtcgctgtatgactaccagggtatgtgtagatcaggacacagt
cattccagtagtgctcggcctctgctcagtcctttctacggccttgcggcagtgatcaaa
tggttcttttctcacatgttgatgttcttaatggagttcaacttctgtgggttgtggcac
tcggattacattgtagacgccaaggctggctaccatacatcccataaagccaagaaggtt
gacgcactgcagccgtgtgacacagagtatcctggcttcgtgtacgattcctccatcaga
gaaaccaacagcctcatcaaatgtggccgttgtcagaagatgtttgtggtgcaggcggtt
cctgaaagtaacctggtgttgatggtggtccaggcggactgtgactgctcccgccagtac
tcctccatcaccctggagcccaaggaggtcaaatacaacgcatcagtcaagtgtaacagg
atgaaatctcagaaagtccgccggcgcccaaactcctgtcacgcctatcatcctaaggaa
aatgccaaggactgtggaggagcttcagagatcagcctatcggtggccgtcttcttgact
tctctggccacttcattggccctctga
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