Oncorhynchus nerka (sockeye salmon): 115134467
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Entry
115134467 CDS
T07952
Symbol
ptprz1
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115134467 (ptprz1)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
one00535
]
115134467 (ptprz1)
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115134467 (ptprz1)
Protein phosphatases and associated proteins [BR:
one01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115134467 (ptprz1)
Proteoglycans [BR:
one00535
]
Cell surface proteoglycans
Others
115134467 (ptprz1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
DSPc
PTPlike_phytase
PTP-NADK
Y_phosphatase3
GUN4_N
Motif
Other DBs
NCBI-GeneID:
115134467
NCBI-ProteinID:
XP_029524326
LinkDB
All DBs
Position
LG9a:33169103..33238739
Genome browser
AA seq
1821 aa
AA seq
DB search
METAVSRGLLLAQLLIVCQLAELVQGYGYRAQRKFSEDIDWSYAGTLNQNNWAKKYPSCN
NARQSPINIEEELTQVKVQFQKLKFEGWEEAMSDGTTIKNDGKTVAVNPEGDFYVSGGGL
RGRFKVGRITFHWGRCNASSEGSEHSLNGVKYPLEMQIYCYEAHRFESLDYAIKDGGRIT
ALSVLFETSIEDNDNYIAIIDGINSVSRFGKSGRVSPFSLRGLLPNSTEKYFIYNGSLTT
PPCTETVEWIVFKNTVAISDTQLEMFCEVMTMQQAGYVMLMDYLQNNYREQQQQFMGQAF
SSYTGTEEVLTPICSSEPENVQADPHNLTSLLVMWERPRAVYDAGIEKYSVTYKLAQGED
PPAFEYLTDGDQDVGAILQDLMANTSYVVQVLAVCTNGLYGRVSEQLTVDMPIADPEETP
DPDSTGFAEEEDYGPRVEPGEDQDNDMDWTTPSSTTTRPKTTTGLPSLHLPGIRTTTPSV
QRRTTTPGSPFKTTQPNRSHTSTEPSVRYRTTTRAPAEGAVSPGSRGSGSTQKYATTATM
PLSRTDDVTTSSTRKEKGRGVAHPVTVPSGKGSGVPMAIPLPESWTVATSSPSLFQGVPP
QPTSPSMPLFSSTASSFGSVLSQTTQPVFNGEILPSTLPVCDTSTPGYPGSAPSNAPTAC
LHAPPSSRPVSSVTPPARDSPHAATALLSSGDSFLAPSSLSSPTLPLLPDPSHPLSGWET
VVSRGVGDEGDDDSGDGDVLSGSSSMASGDPALFSDTPPLQTLPDSPVERDLSELASRPL
PAASLSLQPSLLLSSDFSLSGATPGITDYVYGRLGDSSYATGGVIESSLSWVVDGGGGFT
VASNGVESLCSCSLDGTSSSSWLHASPHLPLPTSDWGAASLALYSSGSDLDHLIHSSLAG
STNPSVGQPLFSSSSSPPVPHPPLSGSHGDLHVSVTATPPRSKDRWVSALRTSAPSSSSS
RTASPVTPTLTPDLQTVDSNASGSTLSGEAQEELDEEWDRIQSSASASASGEGMLPYIPT
APPSFTSEVAASPDSDNDERSSAFYFESESGSAVATETATVSAITAAVPWPLGGEEQSGS
GQGESPYDNEMSSDFSIPERTERDSEEEEPIAEASNSSHESRVGLARDKERRAVVPLAVV
STLTFVGLIILVGILIYWRTCFQTAHFYLEDNTSPRVISVPPTPLLTATDEHEALAVKQF
VKHVTELHHTNAFSREFEILKECYEDVQVCTVDLGITADGSNHPDNKNKNRYINILAYDH
SRVRLSTQADKDGKSGDYINANYVDGFNKSRAYIAAQGPLKSSTEDFWRMVWEQNVGVII
MITNLMEKGRRKCDQYWPLESQDEYGGFLVTVKSSKVLAHYTERTFTLRNTKVQKGSLKG
RINERTVTQYHYTQWPDMGVPEYTLPVLTFVQKSSKARTDDMGPVVVHCSAGVGRTGTYI
VLDSMLKQIKEEGTVNIMGFLKHIRTQRNHLVQTEEQYVFIHDALVEAILGKETEVSSSL
IHSYVNDLLTPGPSGRTQLEKQFKLVSQSNAKQCDYSAALKECNREKNRNSSLIPVERSR
VCLSTVVGETTSDYINASYITGYRQSTEFIVTQNPLAGTVTDFWRMIWDHNSQVIVTLPG
TPATLGTPSLAEGEEPYVYWPRKEQTISCEAFTVTLRSENHVCLANEEMLVVQDYVLEAT
QDDYVLEVRHYRAPRWPNPDSPISSTFELLSLVREESSSKEGPMVVHDEVGGVTAGTFCA
LSTLVCQLELESSVDVYQVAKMINLMRPGTFNDVEQYQFLYKAMLSLVGTQEDERTLQSS
DNNGTVPGGPVSTAESLESLV
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggctgtttcaagaggcttattgctcgctcagctcttgatcgtctgtcaatta
gctgaactggtgcaaggatacggataccgggcccagcgcaaattctcagaagacatcgac
tggtcctatgcagggactctcaaccaaaacaactgggccaagaagtacccatcatgtaac
aatgccagacagtcgcccatcaacatcgaggaggagctgacacaggtcaaagttcagttc
caaaagctgaagttcgagggctgggaggaagcgatgtctgatgggaccaccatcaagaat
gacggcaagacagtggcggtgaacccagagggggacttctatgtgagtggaggggggctg
aggggcaggtttaaggtgggaagaatcaccttccactggggacgctgcaacgcctcctca
gagggctccgaacacagcctcaacggggtgaagtacccccttgagatgcagatctactgt
tatgaagcgcatcgctttgagtccttagactacgccatcaaggacgggggcaggatcaca
gctctctctgtgctgtttgagactagcatcgaagacaatgacaactacatagccattatc
gatggaatcaacagtgtcagccgattcggtaagagtgggagggtgagtcccttctctctc
cggggcctcctgcccaactctacagagaagtacttcatctacaacggctccctcaccacc
ccaccctgcactgagaccgtggagtggatcgtcttcaagaacactgtggccatctccgac
acgcagctggagatgttctgtgaggtgatgaccatgcagcaggcgggctacgtgatgctg
atggactacctgcagaacaactacagggagcagcagcagcagttcatgggccaggccttc
tcctcctacactggcacagaggaggtcctcactcccatctgcagttcagagccagagaac
gtgcaggcagacccccataacctgaccagcctgctggtgatgtgggagcggccacgggcg
gtgtacgacgccgggatagagaagtactcagttacctacaagctggcccagggagaggac
cctccggcctttgagtacctgaccgacggagaccaggatgtgggggccatattgcaagac
ctgatggccaacaccagctacgtggttcaggtcttggcggtctgcaccaacggtctgtac
ggccgcgtgagcgagcagctgactgtcgacatgccgatcgccgaccccgaggagacccct
gatccagattctactggatttgcagaggaagaggactatggaccccgggttgaaccgggt
gaagaccaggacaatgacatggactggaccaccccaagctctacgacgaccaggcccaaa
acaaccactggcctaccaagcctccacttgcctggtatcagaacaaccaccccttctgtc
cagaggagaacaaccactccagggtctcctttcaagaccactcagcccaaccgatcccat
acgtccacggagccgagtgtaaggtaccgcaccacgaccagagctccagcagagggggcc
gtctcaccaggcagcagagggagcgggagtacccagaagtatgccacaacagcgaccatg
ccgctgtctcgcactgatgacgtcaccacttcctcaaccagaaaggagaagggcagaggg
gtggcgcaccccgtgaccgtcccaagcggcaaaggcagcggtgttcccatggccatccct
ctcccggaaagctggaccgtggccacttcttccccctccctttttcagggggtaccacca
cagcctacaagtcccagcatgcccttgttttcgtccactgcctcctccttcggcagcgtt
ctctcgcagaccacgcagccggtgttcaacggtgagatcctcccctccacccttcctgtg
tgtgacacgtcgacccctggttaccccggctccgcccctagcaatgcccccaccgcctgc
ctgcatgcccctccttcgtctagacctgtgtcgtctgtgacccctcctgctcgggactcc
ccgcatgctgctacagcactgttgtctagtggtgactcattcctcgctccctcctccctc
tcctcccccaccctgcctctcctccctgacccctcacaccccctgtctggttgggagacc
gtagtctctcgtggtgttggcgatgaaggcgatgatgatagtggtgatggcgatgtgttg
tctggttcttcatccatggcctcaggtgaccccgcactatttagtgacactccccccctt
caaactctccctgactcgcccgtcgagcgggacctgtctgagctagcctctagaccgctc
cctgcagcctctctctccctgcagccttctcttctcctctctagtgacttctctctgtcc
ggggccaccccgggaatcactgactatgtctatggcaggctgggggactctagttatgct
acgggcggtgtaatagagtcttctctgtcgtgggttgttgatggtggtggagggttcacg
gtagctagcaatggtgtggagtcgttgtgtagctgctctctggatggcacctcgtcctct
tcctggttgcatgcctctcctcacctccccctgcccacgtctgactggggggcggctagc
ctagcgctctactcctccggtagcgacttagaccatctcatccattcatctctggcgggc
tccaccaacccgtctgtaggtcagcctctcttctcttcctcctcctctcctcctgttcct
catcctcctctctccggttcccatggtgacctgcacgtttctgttacagccacaccgccc
cgctccaaggaccgctgggtctcggccctccgaacctccgccccctcctcctcttcctcc
cgcacggcctcccccgtcacccccaccctcacccctgacctgcagacggtagacagtaat
gcgtctggctcgaccctgtcgggagaagctcaggaggagctagatgaagagtgggacagg
attcagagttcagcctcggcctcagcctcaggggagggaatgctcccttacatccccacc
gcccccccctcattcacctctgaggttgccgcctctcccgattccgacaatgatgaacgc
tcctctgcgttttactttgagagtgagagtggcagtgccgtcgccacggagacagcaaca
gtatctgcgataactgcggcggtgccctggccgctaggtggggaggagcagagtggctcg
ggacagggcgagagcccatacgacaacgagatgtcctcagacttcagtatccccgagcgc
acagagagagactctgaggaggaggagccaatcgcagaggccagtaacagcagccatgag
tccagggtgggtctggccagggataaggagaggagggccgtggtccctctggcggtggtc
tccaccctcaccttcgtgggactcatcatcctggtgggcatcctcatctactggagaacg
tgtttccagactgcccatttctacttagaggacaacacatcgcccagagtcatatctgtt
ccacccacaccattgcttacagctacagatgaacatgaagcccttgcggtgaagcagttt
gtcaagcacgtgacagagctccaccacaccaacgcattctcccgggagtttgagatattg
aaagagtgttacgaggatgtgcaggtgtgcacagtggacctgggtatcaccgcagacggc
tccaaccatccagacaacaagaacaagaaccgatacatcaatatcctggcctatgaccac
agccgagtaagactctcaacccaggctgacaaagacgggaagagtggagattacattaac
gcaaactacgttgacggtttcaacaagtccagggcctacatcgcggcccagggccctctc
aagtccagcaccgaggacttctggaggatggtgtgggagcagaacgtgggcgtcatcatc
atgattaccaacctgatggagaagggacggaggaagtgtgaccagtactggcccctggag
agccaggatgagtacggtggtttcctggtgacggtgaagagcagcaaggttctggcccac
tacaccgagagaactttcaccctcaggaacaccaaggtccaaaagggttcactgaagggg
cggattaacgagcggaccgtgacacagtaccactacacccagtggccagacatgggcgtg
cctgagtacacactccccgtgctcaccttcgtccagaagtcctccaaagccaggacagat
gacatggggcctgtcgtagtgcactgcagtgcgggcgtaggcaggactggcacctacata
gtgttggatagcatgctgaagcagatcaaagaagagggcacggtcaacatcatgggtttc
ctcaaacacatccgcacacagaggaaccacctggtacagacagaggagcagtatgtgttt
atccacgacgccctggtggaggccatcttgggcaaggagacggaggtttcctccagcctc
atccacagctacgtcaatgacctcctgaccccagggccctccggcaggacgcagctggag
aaacagtttaagctggtatcccagtccaatgccaaacagtgtgactactcggcagccctg
aaagagtgcaacagagagaagaacagaaactcctctttaatacccgttgaaaggtcaagg
gtgtgtctgtccacggtggtgggagaaactacatcagattacatcaacgcctcatacatt
acggggtaccggcagagcactgagttcatcgtgacccagaacccactggccggcacggtg
acagacttctggaggatgatctgggatcacaactctcaggtcatcgtcacactgccggga
acaccagcaacactgggaacaccaagcctggcagagggggaggagccgtacgtgtactgg
ccccgcaaggagcagacaatcagctgtgaggcgttcacagtgaccctgcggagcgagaac
catgtgtgtctggccaacgaggagatgctggtggtgcaggactatgtcctggaggctaca
caggatgactatgttctggaggtgaggcactaccgggcgcctcgctggcccaacccagac
agccccatcagcagcaccttcgagctgctcagcctggtgagggaggagagctcctccaag
gagggccccatggttgtccatgacgaggttggcggtgtgactgcgggaaccttctgtgcc
ctgtctactctggtgtgccaactagagttggagagctctgtggacgtgtaccaggtggcc
aagatgatcaacctcatgaggcccgggaccttcaatgatgttgagcagtaccagttcctg
tacaaagccatgctgagcctggttggcacacaggaggacgagaggacgctccagtcctct
gacaacaacggaacggtcccagggggccctgtcagcacagctgagagccttgagtccctg
gtgtaa
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integrated database retrieval system
