Oncorhynchus nerka (sockeye salmon): 115134487
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Entry
115134487 CDS
T07952
Symbol
abcc8
Name
(RefSeq) ATP-binding cassette sub-family C member 8
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115134487 (abcc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115134487 (abcc8)
Transporters [BR:
one02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
115134487 (abcc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_29
nSTAND1
Motif
Other DBs
NCBI-GeneID:
115134487
NCBI-ProteinID:
XP_029524370
EnsemblRapid:
ENSONEG00000036505
LinkDB
All DBs
Position
LG9a:complement(35713191..35836469)
Genome browser
AA seq
1583 aa
AA seq
DB search
MSLAFCGNENNSLAYNVDSGVLNNGCFLDALNVVPHIFLLFITFPILFIGWGSQSSKVHI
HHSTWLHFPGHNLRWLLTFVLLFVLVCEIAEGVVSDGFTQSLHLHLYMPAGLAFMAGITS
IIYYHNIETSNFPKLLLALLFYWVLAFLMKTIKFAKYTEHGIGLRQLRYGITGLLALIYG
LLLAVEINVILGRRYLCFTEATEVKPPEDLQDLGVRFLQPFVNLLSKATYWWMNTFITAA
HRRPIDLKVIGKLPIAMRALTNYLKLRKAFESQRRPLGSMPQDPKWIWRALCQAFGRPLI
ISITFRFLADLLGFAGPLCISGIVHHISKENRTIQPPIKLLGVYFISSQEFLANAYVLAV
LLFFALILQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMSMGELTVGQICNL
VAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISALIGATVIAVLAPVQYFVATK
LSQAQKSTLEYSSERLKKTNELLRGIKLLKLYAWEHIFCHSVEETRGKELTSLQAFALYT
SISIFMNAAIPIAAVLTTFVVHVHISEEADLSPAVAFASLSLFHILVTPLFLLSSVVRST
VKALVSAQKLSEFFSSDEIGDEQEPNATMPAGPSNHNSKYQAVPLKVVNRKRPPREDCWN
NYSQKGGDPPPQERDQDLCFRITSGYFTWTDGPPTLSNVDIKVPFGQLTMIVGQVGCGKS
SLLLAALGEMQKVSGTVTWNSLPNLDSEGDESPTSDKDAAGDGDIQKRGSVAYASQKPWL
LNATLVENITFEMPMIKPRYKAVIEACSLQPDIDILPQGDQTEIGERGIVLSGGQRQRIG
VARALYQQANVVFLDDPFSALDIHLSDHLMQEGILKLLREEKRTVVLVTHKLQYLPHADW
IVAMKNGTTQTEGTLKDIQNSEPELFEQWKTLMHRQDGEFEKETVPESMTVLERKNLRRA
MYSKEAAKTEEEDKGESSNDEDDNLSQAMRHRTTIPWHSCGVYLSSAGLLLLLLLLLSQL
FKHSLMVAIDYWLAHWTSRVINAKMEATGRNCTVAQECGFSHSWYLSVFSVLCCLGIVLC
LITSVAVEWTGLRVAKELHHNLLSKIILAPMRLFETTPLGSILNRFSSDTNTIDQHIPAT
LECLSRSTLLCVSALGVISYVTPVFLIALVPLAIACYFIQKYFRVASRDLQQLEDSTQLP
LLSHFSETVEGLTTIRAFKYEPKFRQRLLEFTDANNIASLFLTAANRWLEVRMEYIGACV
VLIAAVASISNSLYNHLSTGLVGLGLTYALMVSNYLNWMVRNLADMEVQLGSVKRINGLL
QTEPENYEGLLTASQVPDGWPQQGEIQIENLSVRYDTTLKPVLKQVNAHISPGQKVGICG
RTGSGKSSFSLAFFRMVDMFEGRIIIDDIDIAKLPLQTLRSRFSIILQDPILFSGTIRFN
LDPEMKATDDMLWEALDIAQLKPVVKTLPGGLDATVTEGGENFSQGQRQLFCLARAFVRK
SSILIMDEATASIDMATESILQKVVMTAFADRTVVTIAHRVHTILKADLVIVMKRGLILE
YDRPQALLEKEDSVFASFVKADK
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggcgttctgtgggaacgagaacaactcgttggcgtacaacgtggacagcggc
gttctcaacaacggctgcttcctggacgcgctcaacgtggtgccgcacatcttcctgctc
ttcatcaccttccccatcctcttcatcggctggggcagccagagctccaaggtgcacatc
caccacagcacctggctgcacttccctggtcacaacctgcgctggctcctcaccttcgtc
ctcctcttcgtcctggtctgtgagatcgcagagggcgtcgtctccgatgggttcacccag
tccctccacctgcacctgtacatgcctgcaggcctggccttcatggcggggatcacctcc
atcatctactaccacaacattgagacctccaacttccccaagctactgctagccctactg
ttctactgggtcttggcctttctgatgaaaaccatcaagtttgccaagtacactgagcac
ggcatcggcctgagacagctccgctacggcatcacaggactcctggccctgatctacgga
ctactactggctgtggaaatcaacgtcatactgggcaggcgctacctgtgtttcactgaa
gctacggaggtgaaacccccagaggacctgcaggatctgggggtgaggttcctgcagccc
ttcgtcaacctgctgtccaaggccacttactggtggatgaacaccttcatcacagcagcc
caccgccgccccatcgacctcaaggtcatcggcaagctgcccatcgccatgcgagccctc
accaactatctgaagctccgcaaggctttcgagagtcagaggaggcctctgggctccatg
ccacaggatcctaagtggatctggagggccctatgccaggcgtttggacgtcccctcatc
atcagcatcacctttcgcttcctggctgacctgctgggcttcgctgggcctctctgtatc
tctggcatcgtccaccatatcagcaaggagaatcgcaccatacagcccccgataaagctg
ctgggggtctactttatctcctctcaagagttcttggcgaatgcatacgtgctggctgtg
ctgctgttctttgccctgatcctgcagagaaccttcctccaggcctcgtattatgtggcc
atcgagacgggcatcaacttaagaggggctatacagactaagatctacaacaagatcatg
cggctgtgcacctccaacatgtccatgggagaactgacagtgggacagatctgcaacctg
gtagccatagataccaaccagctcatgtggttcttcttcctctgtcccaacctgtgggcc
atgccagtccagatcattgtgggggttattctgctctactacctcctggggatcagtgct
ttgattggggccacagtcattgctgtactggcccctgtccagtactttgtggccaccaag
ctgtcccaagcacagaagagcaccctggagtactccagtgagcggttaaagaagactaat
gagctgctgcggggcatcaagctgctgaaactgtacgcctgggaacacatcttctgtcac
agtgtggaggagaccaggggcaaggagctcaccagcctgcaggccttcgccctgtacaca
tccatatctatattcatgaatgcagccatccctatcgctgctgtcctgactacgtttgtg
gtccatgtgcacatctctgaggaggctgacctgtcacctgctgtggccttcgcgtcctta
tccctgtttcacatcctggtcactcctctcttcctgctctccagcgtggtgcgatccaca
gtcaaggccctggtcagtgcccagaagctgagtgagttcttcagtagtgatgagattgga
gacgagcaggagcccaacgctaccatgcccgctggccccagcaaccacaacagcaagtac
caggctgtgcccctgaaggtggtgaacaggaaaaggccccccagggaagactgctggaac
aactacagccagaagggaggcgacccgcccccccaggagagggaccaagacctctgcttc
aggataaccagcggatatttcacctggacagacggacctcccaccctgtctaacgtagac
atcaaggttcccttcggtcagctgactatgatcgtgggccaggtgggttgtgggaagtcg
tccctgctgcttgcagctctgggagagatgcagaaagtctctgggactgtcacctggaac
agtttgcccaacctggactctgaaggcgatgagagccccacatcagacaaggatgcagct
ggtgatggggatatccagaagagaggctctgtggcttatgcttcccagaagccctggctg
ctcaacgcgacactggtggagaacatcacctttgagatgcccatgatcaagcccaggtac
aaggctgtcatcgaggcgtgttccctgcagccggatatcgacatcctgccacagggagac
cagacagagatcggagagaggggtatagttctatctggagggcagcgccagcgtataggt
gtggccagagccctgtaccaacaggccaacgtggtcttcctggatgacccgttctcagcg
ctggacattcacctgagtgaccacctgatgcaggagggcatcctcaaactgctgagagaa
gagaagaggaccgtggtgctggtcactcacaagctacagtacctaccccacgctgactgg
atcgtagcgatgaagaacgggaccactcaaaccgaggggactctgaaagacatccagaac
tctgaaccggagctgtttgaacagtggaagaccctgatgcaccggcaggacggagagttt
gagaaggagacagtgcctgagagtatgacggtgttggagcgcaagaacctgcggagagcc
atgtactccaaagaggccgccaagactgaggaggaggacaaaggtgagagctcaaatgac
gaggatgacaatctgtcccaggccatgcgtcaccgcaccaccatcccctggcactcctgt
ggggtctacctgtcctctgcagggctcctcctcctgttgctgctcctcctatcacagctc
tttaaacactccctcatggttgccatcgactactggctggcccactggacctcccgcgtc
atcaatgccaagatggaagccaccgggaggaactgcactgtcgctcaggagtgtgggttc
agccactcgtggtacctgtcggtgttcagtgtgttgtgctgtctgggcatcgttctgtgt
ctgatcacctctgtggccgttgagtggacaggcctgagagtggccaaagaactacaccac
aacctgctcagcaagatcatactggcccctatgaggctgtttgagaccactcccctgggc
agcatcctcaacaggttctcctctgacaccaacaccatagaccagcacatccctgccacc
ctggagtgtctgagtcgctccaccctgctgtgtgtgtcggccctgggggtcatctcctac
gtgacccctgtgttcctcattgctctggtgcctctggccatcgcctgctacttcatacag
aagtacttccgggtcgcttctagggacctccagcagttggaggatagtacccagctccct
ctcctgtcccacttctcagagacagtggagggcctcaccaccatccgggccttcaagtat
gagcccaagttcagacagaggttactggagttcactgatgcaaacaacatcgcctccctc
tttctcacagcagccaatcgctggctagaggtccgcatggagtacataggtgcctgtgtg
gtgctgatagcagctgtggcctccatctctaactctctgtataaccacctctccactggc
ctggtaggactaggactcacctatgcactcatggtgtccaactacctgaactggatggtt
cgtaacctggcagacatggaggttcagctgggttcagtcaagagaatcaatggtctgctg
cagactgagcctgagaactacgaaggactgctcactgcatctcaggtgccggatggctgg
ccacagcagggggagattcagattgagaacctgagtgtgcgttacgacaccaccctgaaa
cctgtcctcaaacaagtcaacgcacacatcagccctgggcagaaggtggggatctgtggc
aggacaggaagtgggaagtcttccttctccctggccttctttcgcatggtcgacatgttc
gaggggcgtatcatcatagatgacattgacatcgccaagctgcctctgcagaccctgagg
tctcgattctccatcatcctccaggaccccatcttattcagcggaaccatccggtttaac
ctggacccagagatgaaggctactgatgacatgctgtgggaggctctggacatcgctcag
ctaaaacctgtagtcaagaccctaccaggaggactggacgccacagtgacagagggaggg
gagaacttcagccagggccagagacagctcttctgtctggccagagccttcgtcaggaag
tctagcatcctcatcatggacgaagccacagcctctatagacatggccacggaaagcatc
ttacagaaggtggtgatgactgccttcgctgatagaacagtggttactatagcacatcgt
gtccacaccatcctgaaagcagacctggtgatcgtgatgaagcgagggctcattctagaa
tacgacagaccccaggcgctgctggagaaagaggacagtgtcttcgcctccttcgtcaag
gcggacaagtga
DBGET
integrated database retrieval system
