Oncorhynchus nerka (sockeye salmon): 115134520
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Entry
115134520 CDS
T07952
Name
(RefSeq) sorting and assembly machinery component 50 homolog A-like
KO
K07277
outer membrane protein insertion porin family
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115134520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
one03029
]
115134520
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115134520
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
115134520
Transporters [BR:
one02000
]
Other transporters
Pores ion channels [TC:
1
]
115134520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
Motif
Other DBs
NCBI-GeneID:
115134520
NCBI-ProteinID:
XP_029524441
LinkDB
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Position
LG9a:37073682..37086799
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AA seq
490 aa
AA seq
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MSLHFLKLTPAFEVRYILDVIMETVHARSLDPLPMQGPELGFHADDIERPDMEQESKQEV
LENKDVIVQRVHIDGLGRTKEDCLTYEIADVFRAKNLIDVMRRAHEARQKLLRLGIFRQV
DVVIDTSQGVDALPNGLDVTFDVTELRRMTGSYNTMVGNNEGCMVLGLKLPNVFGSAEKL
TFQVSYGTKETSYGLSFFKPQPGHFERSFAVNLYKVAGQFPWSSLRETDRGVSTEFSFPL
WKTNHTLKWEGVWRELGCLERTASFAVREESGHSLKSSLSHSMVIDTRNSAILPRRGALL
KINQELSGYTGGDASFLKEDFEIQFNRRLFWDSVLSASLWGGCLLPIGDKPTCIADRFYL
GGPTSVRGFSMYSIGPQSEGDYLGGEVYWAGAVHLYTPLSFHPGKGGFGDLFRIHFFLNA
GNLCNLNYGDGPQAHLRKLAECIRWSYGAGIVLRLGNIARLELNYCIPTGVQSGDRICNG
FQFGAGVRFL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatttcttaaaattaacaccagcatttgaagtacggtacattctagacgta
atcatggaaaccgtccacgcgaggagtcttgatcctctaccaatgcagggacctgagctg
gggtttcatgcagatgacattgagaggccagatatggagcaggagtcaaaacaagaggtc
cttgaaaacaaagatgtcatagtccagcgtgtacacatagatggtctcggaagaaccaag
gaggattgcttaacatacgagattgctgatgtcttccgtgccaagaacttgattgatgtc
atgaggagagcccacgaagccagacagaagctcctgcgtctcggtatcttcagacaagtg
gatgttgtcatcgatacctcgcaaggggtggatgctctgcctaatggactagatgtgacg
tttgatgtgactgagctgagacgcatgactggtagctataacaccatggttggaaataac
gaaggctgcatggttcttggtctcaagctgcccaatgtcttcggttctgcagaaaagctc
accttccaggtctcctacggcaccaaagagacttcctacgggctgtcgttcttcaagccc
caacctggccactttgagcgcagtttcgctgtcaacttgtacaaagttgcaggccaattt
ccatggagctcgctgagagagactgatcgcggtgtctccacagagttcagtttccctctc
tggaagaccaaccacaccctgaagtgggagggggtgtggcgagagctgggctgtctggag
cgtaccgcgtcgtttgcagtccgggaggagagcggccactccctcaagtcatcactctcg
cactccatggtcatcgacaccagaaactctgcaatccttcccaggaggggggccttgctg
aagatcaaccaggagttgtcaggatacactggaggagatgccagcttcctgaaggaggac
tttgagatccagtttaacagacgtctcttctgggactcggtcctgtctgcatctctctgg
gggggatgcctcctgcccattggagataagccaacttgcattgctgacaggttctatctc
ggtggtcctactagcgtcaggggcttcagtatgtacagcatcggccctcagagtgaaggt
gactacctgggaggtgaggtgtattgggctggagccgtccacctgtatactccgctgtcc
ttccatccaggcaaagggggattcggagacctcttcaggatccacttcttcctcaatgcc
gggaacctgtgtaacctcaactatggtgacgggcctcaagcacacctgaggaaactggca
gagtgtatccgctggtcttacggagcgggaattgtgctgcgactcggaaacatcgcccgg
ctggagctcaactattgcattcccacgggcgtccagagtggagacaggatatgcaacggg
tttcagtttggagctggagtccgattcctgtga
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