Oncorhynchus nerka (sockeye salmon): 115134535
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Entry
115134535 CDS
T07952
Symbol
gart
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3 isoform X1
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00230
Purine metabolism
one00670
One carbon pool by folate
one01100
Metabolic pathways
Module
one_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
115134535 (gart)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
115134535 (gart)
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
115134535 (gart)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
115134535 (gart)
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
115134535 (gart)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
RimK
Dala_Dala_lig_C
Motif
Other DBs
NCBI-GeneID:
115134535
NCBI-ProteinID:
XP_029524492
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All DBs
Position
LG2:complement(11440525..11464656)
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AA seq
1021 aa
AA seq
DB search
MAVRLLVIGSGGREHTLAWKLAQSPHIQQVLVAPGNAGTANCGKISNSEVSVSNHSILAQ
FCKEHSVGLVVVGPEVPLAAGMVDDLQAAGVPCFGPSAKAAQLEASKSFSKAFMDRHSIP
TANWCSFTDPQEACSYIRTASFPALVVKASGLAAGKGVIVAKDQEEACQAVLDIMKDKTF
GSAGETVVVEELLEGEEVSCLCFSDGCSVSPMPPAQDHKRLQDGDLGPNTGGMGAYCPTP
QVSQELLQQIRETVLQKTVDGMKEEGTPYVGVLYAGLMLTKQGLKVLEFNCRFGDPECQV
LMPLLKSDLYEVLQSTLEGKLASSPPEWHQDRSAVTVVMASPGYPGSYKKGVAITGLSQV
EETGVQVFHAGTSLKEGGVVSSGGRVLTVTAVRPSLEMALHAANRGVAAVGFPGAVYRRD
IGHRGIAHLTQHSRGLTYKDSGVDIAAGNRLVDMIKPFAKATSRSGCNAELGGFAGLFDL
KAAGFIDPILVSGTDGVGTKLTIAQACQQHSTLGQDLVAMCVNDVLAQGAEPLFFLDYFS
CGRLDVGVASAVIRGVAEACGLAGCALLGGETAEMPGVYGPGEYDLAGFCVGAVERGALL
PRLGDICEGDLLIGVASSGVHSNGFSLVRKVLERAGVTYSSPAPFGKPGQTVGEVLLTPT
KIYSRLLLPILRSGAIKAYAHITGGGLLENIPRVLPQELSVDLDASRWIIPPVFSWLQEE
GGLCEEEMGRTFNCGLGAVLVVAFPDAQSVLRKLQAHEDAWIVGSLAHKQPGAEPVVIRN
LKHSLRLGPSPCVVDLGPMQNGASQGDSSSTVPRKRTRVGVLISGTGTNLQALMEQTKRT
SSSAEIVVVISNQPGVLGLKRASLAGIQTRVVDHKLYGSRAEFDGTIDHVLEEFDVEVVC
LAGFMRILTGSFVRKWNGKLLNIHPSLLPSFKGVNAQKQALQAGARVSGCTVHFVAEEVD
AGAIIAQEAVPVLMNDTEESLSDRIREAEHRAFPAALELVAGGGVRLGDDGRIIWNPNAQ
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcggttgctggtgattggcagtggtgggcgggaacacaccttggcatggaag
ctggcacagtcaccacacatccagcaggtcctggtggcaccagggaacgctggcaccgcc
aactgtggaaagatctccaactctgaggtgtctgtgagtaatcactccatcctggctcag
ttctgtaaggagcatagcgtggggctggtggtggtagggcccgaggtgcctctcgcagca
ggcatggtagatgacttgcaagcggcaggggtcccgtgtttcggcccctcggcaaaggct
gcccagctggaggccagtaagagtttctccaaggcctttatggaccgtcacagcatcccc
acagccaactggtgctccttcaccgacccccaggaggcctgcagctacatccgcactgcc
agttttcctgctctggtggtgaaggccagcggcctggctgcagggaagggtgtcattgtg
gccaaggaccaggaggaggcctgccaggctgtgctggacataatgaaggacaaaacgttc
ggctctgccggggagactgtggtggtggaggaactactggagggagaagaagtgtcttgt
ctgtgtttcagtgatggctgcagtgtgtcccccatgcccccggcccaggaccacaaacgc
ctgcaggacggggacctgggccccaacacgggcggcatgggggcctactgccccaccccc
caggtgtctcaggagcttttgcagcagatcagagagactgtcctccagaagactgtggat
ggcatgaaggaggagggaaccccctatgtgggtgtgctgtatgctgggctgatgttgacc
aagcaggggctgaaggtcctggagtttaactgtcgcttcggcgacccagagtgtcaggtg
ctgatgcccttgctgaagagtgacctgtatgaggttctccagagcaccctggaggggaag
ttggcatccagtccacctgagtggcaccaggacaggtctgcagttactgtggtcatggcc
agccctggctatcccggctcctataagaaaggtgtcgcaatcactggtctgtctcaggtg
gaggagacaggggtgcaggtgttccacgccggcacgtcgctgaaggaagggggtgttgtc
tccagcggggggcgtgtcctcactgtcacagctgttaggccgtctctggagatggccctg
cacgcagccaatcggggtgtggccgccgtggggttcccgggagccgtgtaccgacgtgac
atcggtcaccgaggcatcgcccacctcacccagcacagcagaggcctaacttataaggac
agcggagtggacatcgccgcgggaaatcgactggtagacatgatcaagccatttgccaag
gccacctctcgctcagggtgtaacgctgagctggggggcttcgccgggctctttgatctc
aaagctgcaggcttcatcgaccccatcctggtgtctgggacagacggagtagggaccaag
ctcacgattgctcaggcatgccagcagcacagcaccctgggacaggacctggtggccatg
tgtgtcaacgacgtgctggcccagggggcggagcctctcttcttcctggactacttctcc
tgtggccgtctggatgtgggcgtggcctccgctgtgatcaggggcgtggctgaggcctgc
gggttggcgggctgtgctctgctgggcggggagactgcggagatgcctggcgtgtacggc
cctggcgagtacgacctggcagggttctgtgttggggcggtggagaggggcgccctgcta
cccaggctgggggacatctgcgagggggacctactcattggggtggcctcctcgggggtg
cacagcaatggattcagcctggttcggaaggtcctggagagggcaggagtcacctacagc
tcccctgcacctttcgggaaacctggacaaaccgtgggcgaggttctcctgacgcctact
aagatctacagccgcctgctcctgccgatcttgcgcagcggcgccatcaaggcctatgcc
cacatcactgggggcggcctattggagaacatcccccgagtgctgcctcaggaactgtct
gttgacctggacgcctcccgttggatcatccctcctgtgttctcatggctccaggaggag
gggggcttgtgcgaggaggagatggggcgcaccttcaactgtggccttggggccgtgctg
gtggtggcctttccggatgcccagagtgttctgaggaagctccaagcccacgaggatgcg
tggattgtgggctcgctggcccacaagcagcctggggccgagccagtggtgatcaggaac
ctgaagcacagcctgcgtttaggcccctctccctgtgtagtagacctggggcccatgcag
aacggagcatctcaaggggacagcagtagcaccgtcccccgcaagaggaccagggtgggc
gtcctcatctcaggcacaggcaccaacctgcaggcgctgatggagcagaccaagagaaca
tccagctcagcagagatcgtggtggtgatctctaaccagccgggtgtcttgggcctcaaa
agggcctctctggctggcattcagacacgggtggttgaccataagctgtacggtagccgg
gcagagtttgacggcaccattgaccacgtgctggaggaatttgatgtggaggtggtgtgt
ctcgccggcttcatgaggatcctcacagggtccttcgtcaggaagtggaacggaaaactg
ctgaacatccatccatccctgctgccctcattcaagggggtgaatgcccagaagcaggct
ctgcaggcgggggcacgggtctctggctgcaccgtccactttgtggctgaagaggttgat
gctggggccatcattgctcaggaagcagtgccggtgttgatgaatgatactgaggagagt
ctatcagatcgcatccgagaggcagagcaccgggccttccctgccgccctggagctggtg
gccgggggcggcgtgaggctgggggatgacggacgcatcatctggaaccccaacgcacag
ggctaa
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