KEGG   Oncorhynchus nerka (sockeye salmon): 115134552
Entry
115134552         CDS       T07952                                 
Symbol
itga11
Name
(RefSeq) integrin alpha-11 isoform X1
  KO
K06587  integrin alpha 11
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04510  Focal adhesion
one04512  ECM-receptor interaction
one04810  Regulation of actin cytoskeleton
one04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115134552 (itga11)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115134552 (itga11)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115134552 (itga11)
   04810 Regulation of actin cytoskeleton
    115134552 (itga11)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:one04515]
    115134552 (itga11)
Cell adhesion molecules [BR:one04515]
 Integrins
  Integrin alpha subunits
   115134552 (itga11)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_1 VWA_2 Integrin_A_Ig_2 FG-GAP_3 FG-GAP_2 ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 115134552
NCBI-ProteinID: XP_029524512
LinkDB
Position
LG9a:complement(38997354..39085636)
AA seq 1189 aa
MEYYCSLLLWTCALLPGLRHCFNFDTKNYKIIEGSKEAQFGYTVQQHEAGGRKWLLVGAP
FETSGQHQTGDIYKCPMDTSPSTNCTRLNLGKVSLNNVSERKDKMRLGMTLTSNPKDNSF
VTCGPLWSYECGSSYYSTGICSRVNESFKFSKTISPAFQRCETYMDIMIVLDGSNSIYPW
YEVQDFLINILQKFYIGPGQIQVGVVQYGSRVVHEFTLNDFRSVEEVVEAAKTIDQRGGE
ETRTALGINVARTEGFKRGGRKGAKKVMLVITDGESHDSPDLQKAMEDTEADNITMYAIA
VLGYYNRRGINPEAFLKEIKYIASDPDDKHFFNVTDESALKDIVDALGERIFSLEGVNPN
GTGFGLQMSQAGFSSHIVEDGILVGAVGAYDWNGAVLKETRHGKVVPPKSSYLEEFPEEL
KNHGAYLGYTVNSVVSAKGRQLYVAGAPRFNHTGKVIIFTLRNNGNLTILHSLKGQQIGS
YYGSELAPLDIDGDGVTDFLLVAAPMFFSKGWERGKVYIYRVTQQNHFLLEGTLEVSDQS
QNSRFGGAMAPIPDMNGDSYSEVVVGAPLEDDHQGAIYLFYGQLSGIQHKYRQRIGAAGF
SAGLQYFGRSVHGMMDVNEDGLVDLAVGALGAAVLIWSRSVVRIQGKITFEPEKINTFNK
DCRRGGKDVTCMSAIVCISLDARTRMQSHGVGVWYRVLIDERRHPPRASLDDNDRQQQSR
NLTLQRGEESCEHVHFYVQETADYGHPIVFVVKVGLQSPDQGPVLDHGWPTTFRTEIPFW
NGCEGDDSCVPDLILHSRTDLLDRRQFCRPRERAAWALCHHQGASVGSERVVEASRRRLV
VEARLENQGENAYGTTLNISHSHNLLFSSLIVKDHSDIQIECRAEDRERNDRTCNVSSPF
MRSLTQVSFRLEFELSHSVFLDHVRVVLQAASDGEEMSPEDNINNIFHPLKYEADLLFTR
DSKPPRFEINSDHYRNKPGSSGPMFNLTYHIQNLGFFPVTDLLFAVDVFAVTKSGNHLFQ
IANIDTDQAVSSNCVLPHHMTPNHVFPEDLSHVPQLNHSNSMTLPMQCRLNVPAYREVRV
TVRGRLHLQALFAVKFKTLELVTAASIELSPSSPVFLHEERPTRHIILEMRKEEDYKIPI
WIIVGSTLGGLLLLSLLILALWKLGFFNRQKQREEEEEQVANGKMPEER
NT seq 3570 nt   +upstreamnt  +downstreamnt
atggaatactactgcagcctgctgctgtggacctgtgccctcctgccaggccttcggcac
tgcttcaattttgacacaaagaattacaagatcattgaaggctccaaagaggcccagttt
gggtacacagtgcagcagcatgaggcaggaggacggaagtggctactagttggagctccc
tttgaaaccagtggccaacaccagacaggcgatatatacaaatgcccgatggacaccagt
cccagcaccaactgcactagactcaacctaggaaaggtatccctgaacaatgtgtcagag
cgcaaggacaaaatgaggctgggcatgacactgacctccaaccccaaggacaacagcttt
gtgacctgtggtcctctgtggtcgtacgaatgtggaagctcctactacagcacaggcatc
tgctccagggttaacgaaagcttcaagttctccaaaaccatctcgccagcctttcagagg
tgcgagacctacatggacataatgattgtcctggacgggtccaactccatctacccctgg
tatgaggtgcaggacttcctcatcaacattctgcagaagttctacattgggccaggtcag
atccaggttggagtggtgcagtatgggtcgagggtggtccatgagttcaccctgaatgac
tttcgctctgtggaggaggtggtagaagcagccaagaccatcgaccaacggggaggggag
gagacacgcacggccctgggcatcaatgtggcacggacggagggatttaaacggggaggt
cggaaaggggctaagaaagtgatgctcgtgatcacggatggtgaatcccacgacagccct
gacctgcagaaggccatggaggacactgaggcggacaacatcaccatgtatgccatcgct
gtattgggctactacaatcggcgcgggataaacccagaggccttcttgaaagagatcaaa
tatatcgccagcgatcctgacgacaaacacttcttcaatgtgactgatgagtcggcgcta
aaggacatagtggacgccctgggagagaggatcttcagtctcgagggagtgaaccctaac
gggacggggttcggtctgcagatgtctcaggcaggcttctcatcacacatagtggaggat
ggcatattggtgggggccgtgggggcctatgactggaacggggctgttctgaaagagaca
cgtcatgggaaggtagtcccacccaagtcctcctatctagaagagttcccagaagaactg
aagaaccatggggcctacttgggttacacagtaaattcagtggtgtcggccaaaggcagg
cagctctatgttgctggagcccctcgcttcaaccacacaggcaaagtcatcatctttacc
ctgagaaacaatggcaacctcaccatcctacactcactcaaaggccagcagattgggtca
tactacgggagtgagctagctcctctggacatcgatggggacggtgtgacagacttcctc
ctggtggcagcgcccatgttcttcagtaagggctgggagaggggcaaggtctacatctac
agggtgactcagcagaaccatttccttttggaagggacacttgaggtctccgaccagtcc
cagaactctcgttttggtggagcgatggcccctatccctgatatgaatggtgactcgtac
agtgaggtagtggtgggagctcctctagaggacgatcaccagggggccatctacctgttc
tacggccagctcagtggcatacaacacaaatacagacagagaattggagcagcaggcttc
tctgctggtctgcagtattttggccgcagtgttcatgggatgatggatgtcaatgaagac
gggttggtggacttggcagtgggcgcattaggtgcagcagtactgatctggtctcgcagt
gtggtgcgcatccaaggaaaaatcacttttgaaccggaaaagatcaacaccttcaacaag
gactgtcgcaggggaggcaaggacgtcacctgcatgtctgccatcgtgtgtatcagtctg
gatgccaggactcggatgcagagccatggagtgggtgtgtggtacagggtgctgatagac
gagaggaggcaccctcccagagcatcgctggacgacaatgacagacaacagcagtcaagg
aatctgacactacaacgcggggaggagtcctgtgaacatgtccacttctatgttcaggaa
actgcagactacggccatcccatagtgtttgtggtgaaggtaggtctgcagagtccagac
caaggcccggtgctggaccacggctggcccactacctttaggactgagatccccttctgg
aatggctgcgagggggatgacagctgtgtccctgacctcatcctgcacagtcggacagac
cttctagaccgcaggcagttctgtaggccaagggagcgggccgcatgggcgctgtgtcac
caccagggggcctcggtgggctcggagcgagtggtggaggcatcacgcaggaggctggtg
gtagaagctcgtctggagaaccaaggagagaacgcctatggcaccacgctcaacatctcc
cactcccacaacctgctcttctccagtctcatagtcaaggaccactcagacatccagatt
gaatgtcgtgctgaggacagggagaggaacgataggacctgcaatgtcagctcacccttt
atgaggtcactgacccaggtgtctttccggctggagtttgagttgagtcactctgtcttc
ctggaccatgtgagggttgtcctgcaggctgccagcgatggggaggagatgagcccagag
gacaacatcaacaacatatttcatcctctgaagtacgaggcagacctcctgttcacaagg
gactccaagcctcctcgttttgagatcaactcagaccactaccggaacaaacccggcagc
agtggtccaatgtttaaccttacttatcacatccagaatctgggcttcttcccagtgaca
gacttgctgttcgctgttgacgtgtttgctgttacaaagagtggtaaccatctcttccag
attgccaatatcgacactgaccaggcggttagctctaactgtgtcctcccacatcacatg
actccaaaccatgttttccctgaagatctctcacatgtcccacagctgaatcactccaac
agcatgacgttgccaatgcagtgcagactcaacgtgcctgcgtacagggaggtcagagtg
acagtcagggggcgtctgcacctccaagctctctttgctgtgaagtttaaaactctggag
ttggtgacagcagcctccatagaactgagtccttccagtcccgtgttcctgcatgaggag
aggccaacacgacacataatcctggagatgagaaaggaggaagattacaaaattcccatc
tggattatagtagggagcacgctgggtggtctgctgctgctatccttgctcatcctggct
ctatggaagctgggcttcttcaacaggcagaaacagagggaggaagaggaggagcaagta
gccaacgggaagatgccagaggagcggtaa

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