Oncorhynchus nerka (sockeye salmon): 115134660 Help Entry 115134660         CDS       T07952                                  Symbol acan Name (RefSeq) aggrecan core protein   KO K06792   aggrecan 1 Organism one  Oncorhynchus nerka (sockeye salmon) Brite KEGG Orthology (KO) [BR:one00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:one00535]     115134660 (acan)    00536 Glycosaminoglycan binding proteins [BR:one00536]     115134660 (acan)    04091 Lectins [BR:one04091]     115134660 (acan) Proteoglycans [BR:one00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    115134660 (acan) Glycosaminoglycan binding proteins [BR:one00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    115134660 (acan) Lectins [BR:one04091]  C-Type lectins   Lecticans    115134660 (acan) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF_TEN EGF I-set EGF_2 Motif Other DBs NCBI-GeneID:  115134660 NCBI-ProteinID:  XP_029524714 LinkDB All DBs Position LG9a:complement(37490992..37508606) Genome browser AA seq 1390 aa AA seqDB search MDLGLESSGLDAISAYYLNSTLSVSIPMDVPLRPLMGTKVVVPCYFHDNPINHPGTPTVD PLSHRIKWTYITKGKATLILVASEGKVHVETEYLDRVTMANYPLVPTDITMEITELRSKD SGTYRCEVMHGIEENHDSVDIQVQGVVFHYRAISTRYTLNFERAKAACIQNSATIATPAQ LQAAFDDGFHQCDAGWLSDQTVRYPIHEPREGCFGDKDEFPGVRTYGVREVNETYDVYCF AQKMSGRVFYSMSVEKFTFYQAMDQCAKLGAKLATTGQLHLAWKAGMDVCNAGWLADRSV RYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSRYDAICYQEEDGEVKTTLFPEVATI TAGPMVYLGRTTALEAEAQGEVLTQAPLDTTSMELPLPILPSVNDTYAKVTPVVGEEIIS RVTAKPNVASEFPRDNDTAMSPTGVVFHYRAGSSRYALSFVEAQLACQSVGAVIASSQQL QAAYEAGLHHCDAGWLRDQSVRYPILSPRDKCSGNLEHLPGVRSYGLRPATERYDVYCYV DRLKGELFYTSDYDSFSYEEAVAHCQKLNTTLATTGQLYAAWRQGFDKCRPGWLQDRSIR YPIHNPRPHCGGGKAGVHTIYAFPNQTGHPDQHSRYDAYCFRAEPTIIHTETRLNVTVVV EEEMINMTTRTDQFTPVSPIVPPVSVDVSGSGLAEHSTSGSGSGTPGSGDTSGGASGEGS GSGFQVTFEGSGHILSGQGSSSGGLQEAVEGSTTVTYTGSGNSGSGVGVGEFSGGLPSGV LPHSGSGSGVSGDLSGSGDSVIIMLDGEMVDISKQQPTGQEFGQGGLDVSGSSGVSGSGG FFSGDVTSTSGSELPDISFEHSGLIDLTENPSGEQEVSGYQPFASSFPSGFPSGYPLDVS GSSGVSGSGGFFSGDVTSTSGSGLPDISFEHSGLIDLTENPSGEQEVSGYQPFATGFPSG FPSGYPSGFHSGSGFPSSGDGSHSGHEVIFLTEDGMMEVTTRRRPEQGRGYVEVSGDGSS QHEGSTSASGLSLGESTVAEGVVLPPGSTMTYPEHITYLGNTGRGDDLDLVEEDQELEGH EQKGQEQEGLEGPMETINVTAPAAFFSSPTTATAVSMVTPVVVEEPAVVDATRDLCEPNQ CGTGTCSVQDGIALCQCPHGFTGEDCNTYESLQGCAEGWVEFMGSCYMHFLERDTWPDAE QRCQELNSHLVSITSQQEQEFVNSNAQDYQWIGLNDKDVQNKFRWTDGSPLGFENWRPNQ PDNYFNSGEDCVVMIWHENGQWNDVPCNYHLPFTCKSEPVVCHSPPEVDNARPMGSRRDR YPVNSIILYQCDAGFTRRHPPVARCLPDGRWEEPQVECIGPGATPSNRLHKRSIRRRSKA TNSRSWRELL NT seq 4173 nt NT seq  +upstreamnt  +downstreamnt atggatctgggccttgagagttctggtcttgacgccatctctgcctactatctcaacagt accttgagtgtcagcatccccatggacgtgccactgcgccctctgatgggcaccaaggtg gtggtgccctgctacttccacgacaacccaatcaaccacccgggcacacccactgtcgac cccctgtcccaccgcatcaagtggacatacatcaccaagggcaaggccaccctcatcctg gtggcatcggagggcaaagttcacgtggagacggagtacctagaccgggtcaccatggcc aactacccgctggtgcccaccgacatcaccatggagattacggagctgcgctccaaggac tcaggcacctatcgctgtgaggtcatgcacggcatcgaggaaaaccatgactcggtggac atccaggttcaaggtgttgtgttccactaccgagccatctctacacgctacactctgaac tttgagagagccaaggctgcctgtatccagaacagtgccaccatcgccaccccggcccaa ctacaggctgcctttgacgatggcttccaccaatgtgacgccggttggctatctgaccaa acagtcaggtaccccatccatgagcctcgtgagggttgctttggagacaaggatgagttc ccgggcgtgcgaacctacggcgtgagagaggtcaacgagacctatgacgtgtactgcttc gcacagaagatgtcaggcagagtgttctactccatgtccgtggagaagttcaccttttat caggcaatggaccagtgtgccaaactaggggccaagctggccaccacagggcagctgcac ctggcctggaaggctggcatggacgtgtgcaacgcgggctggctggcagatagaagcgtc cgctaccctatcaacattgccaggccgcagtgcggtggaggactacttggagtgaggacc gtgtacctgttccctaaccagacaggctacccctacccagactcccgctacgacgctatc tgctaccaagaagaagacggcgaagtcaagacgaccctgttcccagaggtggccaccatc acagctggccccatggtttacctggggcgtaccaccgctcttgaggctgaggcacaaggg gaggttctgacccaagcccccctggacaccaccagcatggaactgcccttacccatcctc cccagtgtgaatgacacgtatgccaaggtcaccccggtcgtgggagaagagatcatcagc agggtgacagctaaacctaatgtggcctccgagttccctcgtgacaatgacactgccatg tctcctacaggtgtagtgttccactaccgtgctggctccagtcgctatgccctgtccttc gtggaggcccagttggcctgtcagagtgtgggtgcggtcatcgccagctctcagcagctc caggcagcctatgaggcagggctccaccactgtgatgcaggctggctcagggaccagagc gtcaggtaccccatcctgtctcccagagataagtgctcagggaatctggagcatctccca ggggtgaggtcctacggcctgagacccgctaccgagcgatacgatgtctactgctatgtg gaccgcctcaagggggagctgttctacaccagcgactatgacagcttctcctacgaggag gccgtggcccactgtcagaagctcaacaccacgctagccaccacagggcagctctatgcc gcctggagacagggctttgacaagtgccgtccaggctggctgcaggaccggagcatccgc taccccatccacaaccccaggccccactgtggaggaggcaaggctggggtacacaccatc tacgccttccccaaccagacgggacaccctgaccagcactccagatacgacgcatactgc ttcagagctgaacctacgattattcacactgaaaccagactcaacgttactgtagttgtc gaggaggaaatgatcaacatgacaaccagaacggaccaatttactccggtgagccccatc gtaccacctgtatctgtggatgtgtccggttcaggcttagctgagcattctaccagtggt agtggcagtggaacccctggtagcggagatacatctggtggggccagtggcgagggctcc gggtctggcttccaagtcacattcgagggcagtgggcacatcttgtcaggacagggctct agctctggaggtctacaggaggcagtagaggggagcaccactgtcacttacaccgggtct gggaatagtggctccggggtgggggtgggagagttcagcggtgggctaccgtctggtgtc cttccccactccggtagtggcagtggggtatctggggacctgagcggtagcggggactct gtcataatcatgttggatggagagatggtggacatctccaagcagcagcccaccggacag gagtttggacaaggaggtttggatgtcagtggctccagtggagtgtccggatcgggtggc ttcttcagcggggatgtgaccagcacttctggctccgaacttcccgacatatctttcgaa cattcaggtctcattgacctgaccgagaatccctcgggagagcaggaggtctctggctac cagcctttcgcctccagttttccaagcggtttcccctccggttatcctttggatgtcagt ggctccagtggagtgtccggatcgggtggcttcttcagcggggatgtgaccagcacttct ggctccggacttcccgacatatctttcgagcattcaggtctcattgacctgaccgagaat ccctcgggagagcaggaggtctctggctaccagcctttcgccaccggttttccaagcggt ttcccctccggttatccttccggttttcacagcggctctggattcccatccagtggtgac ggatcccactcaggccatgaggtcatctttctgacagaagacgggatgatggaggtgaca acacggcggcgtccggagcagggtcggggatacgtagaggtcagtggagatggcagtagc cagcatgaggggagcacctcagccagtgggctctccctgggggagtcaacggtcgcagaa ggcgtggtgctgccccctgggtctaccatgacttacccagagcatatcacctatctggga aacacgggaagaggggatgacctggacctggtggaggaagaccaggagctggagggccat gagcagaaagggcaggagcaagaaggactggaagggcccatggagacaatcaatgtcacg gcaccagctgcattcttctctagcccaacaacagcaaccgccgtctcaatggtgacccct gttgtggtggaggagcctgctgtagttgacgctactcgtgacctttgtgagcctaatcag tgtggcacaggcacctgttctgtgcaggatggcattgctttgtgccaatgcccacatgga ttcactggagaggactgcaacacatatgagtcactgcagggctgtgccgaaggctgggtg gagttcatggggagctgctacatgcactttctagagagagacacctggcccgacgccgag cagcgctgccaagagctcaactcccacctggtcagcatcacctcccaacaggagcaggag tttgtcaactctaacgctcaggactatcagtggattggacttaatgacaaggacgtgcag aataagttccgctggacagatgggagtccattgggatttgagaactggaggcccaaccag ccggataactactttaactctggagaggactgtgtagtgatgatctggcatgagaacggc cagtggaacgatgttccctgcaactaccacctgcccttcacctgcaagagtgaacctgtc gtgtgccactcccctcctgaggtggacaacgccaggccgatgggcagcagaagagaccgc taccccgtcaactctatcatcctctaccagtgtgatgcaggcttcacacggcgccacccg cctgttgcacgctgccttcccgacgggcggtgggaggagccacaagtggagtgtatagga cctggtgccacccccagcaaccgactacataagaggtccatcaggagacggtctaaagca accaacagtcggtcatggcgggagcttctctaa

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