Oncorhynchus nerka (sockeye salmon): 115134694
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Entry
115134694 CDS
T07952
Name
(RefSeq) sal-like protein 1
KO
K19871
sal-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115134694
03036 Chromosome and associated proteins [BR:
one03036
]
115134694
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115134694
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
115134694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_2
zf-C2H2_15
zf-C2HE
zf-C2HC_2
Rad50_zn_hook
zf-H2C2_5
zf-Di19
Motif
Other DBs
NCBI-GeneID:
115134694
NCBI-ProteinID:
XP_029524746
LinkDB
All DBs
Position
LG9a:4769411..4773523
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AA seq
1190 aa
AA seq
DB search
MEEYGDLSEEKSEVKEESMNVSRTNNSHCRLDSPSSISSSRKSSTDSKTDIVSCTSVLPI
SLPQPGSDLLEHQGTFSWFNSNVIIENLESTKVAVAQFPQQSRSDTGSSGSGKMAVSSLM
EQLLALQLHQIHQLQLIDQIRHQVLLFASQRSEVSETLTQTPISCPQVSLASTQASQLTT
LSSHLSQQLAAAAGLAQSLASQSASIGHFKRLTTKVQLPQSPFGRSIVHSSTEPLQSIRK
HIASAVSKPHSRKKYTHASGLYPQLNFSAQTIRNSPALGTGSLLNRSNTPHLPQPPPSNQ
TLSSAGPSIGTIVQDLNALKALAGQRKGKPSNVTSFEPKSSSKEAFFKHKCRFCAKVFGS
DSALQIHLRSHTGERPYKCNICGNRFSTRGNLKVHFQRHKERFPHTQMNPYPVPEHLDNI
PTSTGIPYGMSIPPEKTVTCWQDTKPSLATLTTSVGLLLQTGSPNFPFLIKKEEQPVSIT
AYSSPVVRDSSSAVKSVDLIEAGKVPKFHTMNLKTDNVIPPLTFSSKMSSTTERSADYVS
VNVTSISTNPIKLEQFKTKHPFRGGVLDPMQTSETLKLQQLVENIDKKVTDPNECVICNR
KLSCQSALKMHYRTHTGERPFRCKVCGRAFSTKGNLKTHHAVHRTTPPLRVHHSCPICQR
KFTNAVVLQQHIRMHMGCQIPNTPLSEQNYPMSMESDGGSIDEKKLEKLENPSDDLDFND
REIAGMSRFNNSSSGSMSSSPSDSTGAGSSDPERTTNYHKPVEEKQVNWFKTKVYDSSSL
GGDRSGGSLAVSENTVDKQSLSQSKGVPVCSSPTSFEEMYQKALSQAHINPNLLQFTGTG
PLVSLDHLKSLNPLKDPTNMVYTFREQLGIFKNTECDICGKTFACQSALDIHYRSHTRER
PFICTACNRGFSTKGNLKQHMLTHQMRDLPSKLFEPTTPSIASCPDNSVHPLSTQMIKTE
VNRFLGSSRYGVPRDLLGSLRLRTSSASSSPALPTPPPRRTPKQHYCHTCGKTFSSSSAL
RIHERTHTGEKPFACTVCGRAFTTKGNLKVHMGTHMWCSTPTRRGRRLSVDGPLMFMGTH
HVKLPEPPQRPDIRSSNGDSFFIWNHCTNSFSKNLAMRTNDISVGGGPHLSGPMGHGASS
PIGGVNVGRDKFHHTEHNAALALPGKDDTKRATHFCFTRLIEEKKEIITN
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtacggcgatctgtcggaggagaagtcagaagtgaaggaagaatccatgaat
gtttcaagaactaacaatagccattgccggctagatagccccagtagcatcagtagcagc
cggaaaagcagtactgacagcaagactgacattgtttcatgtacctcagttctcccaatt
tcactacctcaacctggcagcgatctgttggaacatcaggggacattctcatggttcaac
agcaatgtcatcattgaaaacctagaaagcactaaagtggcagtggcccagtttccccag
cagagccgatcggacactggaagcagtggcagcggtaagatggctgtctcttctctgatg
gaacaactcctggccttgcagctgcatcagattcaccagctgcagctgattgatcagatt
cgtcaccaggtcttactatttgcttcccagaggtctgaggtatcagagacactgacacaa
acacccatcagctgccctcaggttagtctagcatcaacgcaggccagccagttgacaacc
ctcagttcccatctctcccagcagctagcggcagctgctgggttagcccagagtctcgcc
agccagtctgccagcatcggacactttaaacgattaacaacaaaagtacaattaccacag
agcccctttggaaggagtattgtacactctagcactgaacccttgcaaagtatacgtaaa
cacatagcttcagcagttagcaagccccactctagaaagaagtacactcatgctagcggt
ctgtaccctcaactcaatttttcagcccaaaccataaggaactcaccggcacttggcaca
ggtagcttgctaaaccgatcaaatacaccacatctacctcagccaccacccagcaatcaa
acactctctagcgctggaccaagcattggcacaattgtgcaggacctgaatgccttaaag
gcgctggccggacaaaggaaaggaaaaccatccaatgtgacttctttcgaacccaaaagc
tcttccaaagaggccttctttaaacataaatgcaggttttgcgctaaggtttttgggagt
gacagtgccttacagatccatttgcgatcccacactggggagaggccatacaagtgcaac
atctgcgggaatcgtttctccacccgtgggaacttgaaggtacacttccagcggcacaaa
gagaggttcccccatacccaaatgaacccttaccctgttccagaacacctggacaacatc
ccaaccagcacaggaatcccttatggcatgtctataccaccagaaaaaacagttacatgc
tggcaggatactaaaccatccctagccaccttgactacttctgtaggcctgttgctccaa
actggatcacccaactttccctttctcatcaagaaagaggagcagcctgtttcaataact
gcatattccagtccagttgtacgtgattcatctagtgcagtaaagagcgtagacttgata
gaggctggaaaagtcccaaagttccacaccatgaatctgaaaacagacaacgttatacct
cccttgacctttagctcaaagatgagctccacaacagaaagatcagctgactatgtatcc
gtcaatgtcacttccatcagcacaaatcccatcaagttggagcagttcaagaccaaacat
cccttcagaggaggagtccttgatcccatgcagacatcagagaccttgaaactccagcag
ctggttgagaacattgacaagaaggtgacagaccccaatgagtgtgtcatttgcaaccgc
aaactcagttgtcagagtgccctcaagatgcactaccgcacccacacaggagagcggccc
ttcagatgtaaagtgtgtggacgggcgttctccaccaaagggaacctgaagacgcaccat
gcggttcatcgcaccacaccgccactgagggtccaccactcctgccctatctgccagagg
aagttcactaacgctgttgtccttcagcagcacatccgtatgcatatgggttgccagatt
cccaacacccctctttctgaacagaactacccaatgtcaatggagtctgatggaggttca
atagatgagaagaaattagaaaagttggagaacccttctgatgatttagacttcaatgac
cgtgagatcgcaggcatgtctaggtttaataactcctcgtccggcagcatgtcttcctct
ccatctgatagtacaggagcaggctcctctgatcccgaaaggacaactaactatcataag
ccagtggaggagaagcaggtcaactggtttaagacgaaggtctatgactcgtcatctctt
ggaggtgatcgaagtggtgggagccttgctgtttctgagaataccgttgacaagcagtct
ctttcccaaagcaagggtgttccagtatgttctagccccacaagctttgaggaaatgtac
cagaaagctttatcccaggcacatatcaatccaaaccttttgcagttcactggcactggt
ccactcgtgtcccttgaccatctaaaatctttaaacccactgaaggatcccactaacatg
gtctacactttccgtgaacaactaggcatattcaagaacactgaatgtgatatttgtggt
aagacctttgcctgccaaagtgccttggacatccattatcgaagccataccagggagaga
ccatttatttgtacagcttgcaacagagggttttccaccaaggggaacctcaagcagcac
atgctaacacatcagatgagggacctgccatccaagttgtttgagcccaccactcccagc
attgcctcatgccccgacaactctgtacatcctctgagcacccaaatgatcaagacagaa
gtgaacagattcctgggtagttcccgctatggggtaccaagggatcttctaggcagtttg
cgtttgaggacgtcctctgcctcttcctccccagcgcttcccactccgccacctcgacgg
actcccaagcagcattactgccacacttgtgggaaaaccttctcttcttctagtgccctg
cgaatccacgagaggactcacactggggagaagccgtttgcctgcactgtctgtggtcgg
gcattcaccaccaaaggaaatctgaaggtccacatgggaactcacatgtggtgtagcacc
cccaccaggcgaggacgcagactgtctgtggacggaccattgatgtttatgggaactcat
catgtgaagctaccagagcctccccagaggccagacattaggtccagtaatggagactcc
ttttttatctggaaccactgtacaaactccttctctaagaacttggccatgaggaccaat
gatatctcagtcggaggtgggcctcacctctctggaccaatggggcatggggccagctca
cccatagggggcgtaaatgttggtcgggacaaatttcaccatacagaacacaatgctgct
cttgcgctgcctggtaaagatgataccaaaagagcgactcacttctgtttcactcgtttg
atagaagagaagaaggaaattattacaaattaa
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integrated database retrieval system
