Oncorhynchus nerka (sockeye salmon): 115134868
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Entry
115134868 CDS
T07952
Name
(RefSeq) zinc finger homeobox protein 3-like
KO
K09378
zinc finger homeobox protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115134868
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
115134868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
zf-C2H2_ZFHX3
zf-C2H2
zf-C2H2_4
Homeobox_KN
zf-H2C2_5
zf-C2H2_ZNF462
zf-C2H2_16
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
115134868
NCBI-ProteinID:
XP_029524897
LinkDB
All DBs
Position
LG9a:18403636..18417940
Genome browser
AA seq
2122 aa
AA seq
DB search
MDIGEGGRGRDGGREGGEPDISTKPLSHPLLTPEVVPSKGSPSRTSAPAPAKEPSNLTQT
EQGGAEGTAGREETPEGERGIYSQNNGVTLKEEQEKEEKLNEKKEKERLLLVDDREETGR
KNLAPALSSKDRGEEEKEKEEEREEAISNQSQTKSKCSILPRQSQHSSASSTVMASGTLN
SNIHITASNSPKHSTSPSTCPKLTLSPSNSPKHSTSPFTSPKRSSFFPSSPYPQNETEVR
DTGEVQGNSPCFPLSFKPQQSALSKSTSPPAKDDGRADATHTSLIANGDTAKVPKPNNNP
EVRDGDREMEIERDDDEGNGEKEREGDENIETVSKYLHSSPSSSSSPSSPVSLNSHMALM
HSRNSCKTLKCPKCNWHYKSQQTLQVHLREKHPESGGSCVCGGLGENCVCGGSRGVCLYC
STGKAHPRLSRGESYVCGYKPYRCGVCDYATSSKGNLSIHMQSDKHLSNVQTAGQTQHAH
STHTHSTHSAGSTVRDTTGGQVYGHTHPEVTQPPENTPPYPSHPSSQGKRWRCEVCDYET
SIARNLRIHTTSEKHTQNVLRLKHTHNVLQLQRSYYLAHCRSLPPHLTLLHSTGGEQSLD
IHQLTAEEPVAPDSTLTPSPSPPPSSSPSPSPSPSPPSPLSLSPSPPPPLSLSSSSPLYR
GVFRCLVCFSFSSDSLESLGSHLSAPRSLPQSEWRCLVAGGCYCRLCGYSTPLTANFTLH
CQTDRHRARYQLAAHLWERGEKGEAVDWEEVGKLVATGNLVQLKCNVCDFQTTSLEKLRI
HSVNSQHQASLRVYMFLEQYDNAVAGGSWSFHCVLCNYSSRSKLHLLRHTHSTGHHKREE
LHSLQLVKRRSLNKGEDLAAIFSIRKCTSPEIDESSEEGERRDSLSPAKRSFSWLEETQS
PLSPKCPRTDKHTTDQHTTAKCPLCQDTLVHTHLRRHLTLIHSVAQDCVEKLMSTVAVDL
PEILQKETLQRDSHSSDSNTNEYQTNDSSTIDFYAKESLRNESQSNDCHINEEEVIPAKD
VPALPTRPCEDQHLAEDNTSHLPESPSPPPSLPTPPSPSLSHLPSSALPPSPPSDAPPSS
DRHCYRFRCGRCSLAFRTQEKLKLHWQYHAMRAATECHLCPRRCRSQEALQRHLLNTHLQ
DLHLQGTHPDQIGAHIQRPTSLEGEEEEGESMSEEDEEEGNEGEEDEKDDPDEEERPSPG
VSNSDKGSGQQEEEAGSEPSPLIKGSNPTLERFLDPARPYKCSVCCESFTQRTILLVHYN
SVSHLHRAKARRALHDSRPSHADTPQGLEPSPYRCSLAPDPRPYRCRMCGVAYSQSSTLD
IHLRSVLHQTRARAARTQLPLNPHTHQTPASTQAPHTPGPSLVQTQTPASSPSPGGGEAS
TRGNPPADTRPAPAPPSPCSSLSEAQLSVGVSGQVKGQQAKRRRVEDLTTSAGQQDLMLL
QQQLAQAQILQQQQELTQAQIQQHTALLQPQLFSPTLLPHLPLLQQNLLKQHLPSAAEIL
QHGNLFPPLPLSPDSLFSLQQQLLLSFYLSGGLHLNPNTTLMNQTTSAVSPQTTSAVSPQ
TTSAVSPQTTSAVSPQTTSAVSPQTTSLSSPLQTTALHLLSPPQTTSAVSPQTTSAVSPQ
TTSAVSPQTTSAISPQTTSAISPQTTSDQHPQIERLEPPSPQPETNGIQFPAHAPKCETQ
AETAGSDSPLHQTEKDLPPYTTTHSAPSPALPPYTTTHSAPSPALPPYTTTHSAPSPALT
PYTTTHSAPSPALPSLERRLEEGTEVRPMSDVMAGDGEEGGEREGEGDEQRRDRRQRTTI
SAEQLEVLYQRYSLNSNPTRSALEGITRDTGLKKRVVQVWFQNTRARQRKGQLQTLGRGG
LGVGLGGDNHRRCPFCRALFKAQSALDAHVRARHWSQTDRPAYGLSHQIGSADDFSFSHN
HGSYRDREGPPLSLQHSPSLSHHPSLPTSLHPSPNPFHPSPSPGVIPTERKYISGKTDLT
FDLNEPDMEEEEEEEGLSIKIFPSSDQAHEGNHSDLLSLGYKYGMASFNVQDCDQNSSPS
LSESVDRHGPRQQQQRQRTQMTPQQVAKLRACYREHPTPSPLQCEGLGRQLGLPRRVVQV
WFQNGRAKEKRARSLRVDPTTG
NT seq
6369 nt
NT seq
+upstream
nt +downstream
nt
atggacatcggtgagggagggagaggaagggatggagggagagagggaggagaacctgac
atcagcaccaagccattatctcatcctctcctgaccccggaagtggttccttctaagggg
tcgccctctcgtacctcagccccggcccctgccaaagagccctccaacctgacccagaca
gagcaagggggtgcagaggggaccgcaggcagagaggagaccccagaaggggagcggggt
atatactcacagaataatggtgtgacactgaaagaagagcaagagaaggaagagaagcta
aatgagaagaaggagaaagaaagattgttactggtggacgacagagaggaaacgggaaga
aaaaaccttgcaccagccctcagcagcaaagacagaggagaagaggaaaaagagaaggaa
gaggagagagaagaggccatctcaaaccaaagccaaaccaaatccaaatgtagtatatta
cctcgacagagccagcacagctctgcttccagcactgttatggccagtggcacattgaac
agcaacatccacatcactgcttccaattctccaaagcactctacctctccttctacctgt
ccaaagctcacattatcaccttccaattctccaaagcactctacctctcctttcacctct
ccaaagcgctccagctttttcccctcctctccttatcctcagaatgagacagaggtgaga
gacacaggagaagtgcagggcaatagtccttgttttcctctgagctttaaaccccagcag
tctgctctgtctaagtccaccagcccacccgctaaggatgatggtagggcagacgccact
cacacttcccttattgccaatggagacaccgccaaagttccaaaaccaaacaacaaccca
gaagtgagagatggagatagagagatggaaatagaaagagatgatgatgagggaaatgga
gagaaggaacgagagggagatgagaacatagagactgtatctaagtacctccactcctct
ccctcctcttcctcctcaccctcctctcccgtctcactgaacagtcacatggcattgatg
cactcccggaactcctgcaagacacttaaatgccccaaatgtaactggcattacaaatcc
cagcagacactgcaagtccacctcagagaaaaacacccagagtctgggggctcatgtgtg
tgtgggggcttgggggagaattgtgtttgtggagggtcaaggggtgtgtgtctgtactgt
agcacagggaaggcccatcctcgtctatcccgaggggagagttatgtctgtgggtacaag
ccctatcgttgtggtgtgtgtgattacgcaacgtcctctaaaggaaacctcagcatacac
atgcagtcagacaaacacctcagcaacgtacagacagcgggacaaacacaacatgcgcac
agcacacacacacactccacacacagcgcgggctccactgtcagagacacgacaggcggt
caggtgtacggacacacacaccccgaagtcacgcagccccctgaaaacacaccgccctac
cccagccatccctcctcccagggtaagaggtggcggtgtgaggtgtgtgattatgagacc
agcattgcgcggaacctgcgcatacacaccaccagcgagaaacacacacaaaatgtgctg
cgcctgaaacacacacacaacgtactgcagctgcagagaagctactacctggcccactgc
aggagtctgcctcctcatctcacactgctacacagcacaggtggggagcagtctttggat
attcatcaactaacagcagaggagccagttgccccagattcaaccctgaccccctccccc
tctcctcctccctcctcctcaccatccccttctccatctccctctcccccttctcccctg
tctctctccccctctccccctcctcccctgtctctctcctcctcatctcccctctaccgt
ggtgtgttccggtgcctggtgtgtttcagtttctcctctgacagtctggagtctcttggg
tctcacctgagtgccccccgctccctgccccagtctgagtggcgttgtctggtggccgga
ggctgctattgcaggctgtgtggctacagcacccccctcacagctaacttcaccttgcac
tgccagacagacagacacagggcccgctaccagctggctgcccacctctgggagagaggg
gagaagggggaggctgtggactgggaggaagttgggaagttggttgctacaggcaacctg
gtccagctgaagtgtaacgtgtgtgacttccagaccaccagcttggagaaactgagaata
cacagcgtcaactcccaacaccaggccagcctcagagtctacatgttcttagagcagtat
gacaatgcagtagctggaggctcctggtcgttccactgtgtcttgtgtaattactcctcc
cgctctaaactccacctactgagacacacccactccacaggtcatcataagagggaggag
cttcacagcttgcagcttgtgaaaaggaggagcctgaataaaggagaggatctagctgcc
atcttcagcatcaggaagtgtaccagtcctgagatagatgaaagcagtgaggagggggag
aggagagattccttatccccagccaagcgatcattctcttggctggaggagacacagagc
cccctctctcccaaatgccccagaaccgacaagcacaccactgaccaacatactactgcc
aagtgcccactgtgccaggacacactggtacacacacacctgagacgtcacctcacactc
attcatagtgtggcccaggactgtgtggagaagctcatgagcactgtggcagtggatctg
ccagagattctacagaaagagacactgcagagggattcccattcaagcgactccaacaca
aacgaatatcaaacaaacgattccagcacaatcgacttttacgcaaaggagtccctcaga
aatgagtctcaatcaaacgactgccatataaatgaagaagaagtgataccagccaaagat
gtccctgctctgcccacccgtccttgtgaggatcagcatctagcagaggacaacacctct
cacctcccagagtcccccagcccccccccctccctccccactcctccctctccctccctc
agccacctcccttcatccgccttacctccctctcctcccagcgatgcccctccctcctct
gatcgtcattgttacaggttccgctgtggcaggtgcagtctagcattccggacacaggag
aagctgaaactgcactggcagtaccatgccatgagggcggcgacagagtgccacctctgc
cccagacgctgccgcagccaagaggccctgcagagacacctgctcaacacacacctacag
gacctacacctacagggtacacaccctgaccagattggagcacacatccaacgaccaacc
agcctggagggggaggaagaggagggggagagtatgagtgaagaagatgaggaggaggga
aatgaaggagaggaggatgaaaaggatgacccagatgaggaggagaggcccagtccaggg
gttagtaatagtgacaagggttcagggcagcaggaggaggaggcagggtcagaacccagc
cccctcatcaagggctcgaacccgactctggagcggttcctggacccggctcggccctac
aagtgttcagtctgctgtgagtccttcactcagagaaccatcctgctggtccactataac
tctgtgtcccacctccaccgagccaaagccagacgggccctgcatgactccaggcccagt
catgctgacaccccccagggcctggaaccaagcccctaccggtgcagcctggcccctgac
cccaggccctaccgctgcagaatgtgtggggtggcctacagccagagctccaccctggac
atccacctccgttctgtactgcaccagacacgagcccgtgcagctcggacccagctacca
ctgaacccccacacccaccaaactccagcctcaacccaggctccccacaccccaggccca
tccttggtccaaactcagacccctgcctccagcccttcgcctggaggaggagaggcatct
accaggggaaaccccccagcagacaccagaccagcccctgcccccccaagtccctgttcc
tccctgagtgaagcccagctgagtgtgggtgtctctgggcaggttaagggtcaacaggct
aagaggaggagagtagaggacctgaccacttccgcaggacagcaggacctgatgttactc
caacagcaattagcccaggcccagatactacagcagcaacaggagttaacccaagcccag
atacagcaacacacagccctcctccagccccagctctttagtccaacactgctcccacac
ctccccttactgcaacagaacctcctaaagcagcacctcccttcagcagcagagattctc
caacacgggaacctcttccctcctctccccttatccccagacagcctattctctctacag
cagcagctgctcctgtccttctacctttctggagggttgcatctcaaccccaacacaacc
cttatgaaccagaccacctcagctgtctcccctcagaccacctcggctgtctcccctcag
accacctcagctgtctcccctcagaccacctcagctgtctcccctcagaccacctcagct
gtctcccctcagaccacctcgctgtcctcccccctacagaccaccgcgctacacctactg
tctccccctcagaccacctcggctgtctcccctcagaccacctcagctgtctcccctcag
accacctcagctgtctcccctcagaccacctcagctatctcccctcagaccacctcagct
atctcccctcagaccacctcggaccaacacccccagatagagaggcttgaacctccctct
ccacagccagagacgaatggaatccagtttccagcccatgccccgaaatgtgaaacccag
gctgagaccgctggcagtgactcccccctccaccagacagagaaagacctgcccccatac
actaccacccactctgctcctagcccagccctgcccccatacaccaccacccactctgct
cctagcccagccctgcccccatacactaccacccactctgctcctagcccagccctgacc
ccatacaccaccacccactctgctcctagcccagccctgccctctctggagcgtaggctg
gaggaagggacagaggttaggcctatgagtgatgtgatggccggtgatggagaggaaggg
ggagagagggagggagagggggatgagcagaggagggataggcgccagaggaccaccatc
agtgcagagcagctagaggttctataccagcgctacagtctgaactccaacccaacccgc
tctgcactggagggcatcaccagggacacagggctgaagaaacgtgtggtgcaggtatgg
ttccagaacaccagggctcgtcagaggaagggccagctccagaccctggggagaggaggt
ttaggtgtgggtctggggggtgacaaccacaggcgctgtccgttctgtagggctttgttc
aaggctcaaagtgccctggacgcccatgttagggcccgccactggtcccaaactgacaga
cctgcctatggcctgtctcatcagataggttccgctgatgacttcagcttttctcacaac
catggatcctacagagacagggagggtcccccactctccctccagcattctccctctctc
tcccaccatccttctctccctacctccctccatccctccccgaacccctttcatccctct
ccaagccccggagtcatccccactgagagaaaatacatttctgggaaaacagatttgacc
tttgacctgaacgaacccgacatggaagaggaggaagaggaagaaggtctgtcaataaaa
atattcccttcgtctgaccaggctcatgagggtaaccatagcgatctgttgtctctggga
tacaaatatgggatggcaagcttcaacgttcaagactgtgaccagaattccagtccaagt
ctgtctgagagtgtggataggcatggaccgagacagcagcagcagaggcagcgtacacag
atgaccccccagcaggtggccaagctcagagcctgttacagggagcaccccacccccagc
cccctgcagtgtgagggcctgggacggcagctggggctcccacgcagggtggtgcaggtg
tggtttcagaatggccgggccaaggagaagagggcaaggagcctcagagttgaccccacc
acaggatag
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integrated database retrieval system
