Oncorhynchus nerka (sockeye salmon): 115134871
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Entry
115134871 CDS
T07952
Name
(RefSeq) semaphorin-3D-like
KO
K06840
semaphorin 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_6
Ig_3
PSI
ig
DUF702
V-set
Motif
Other DBs
NCBI-GeneID:
115134871
NCBI-ProteinID:
XP_029524899
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Position
LG9a:complement(19008401..19050658)
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AA seq
767 aa
AA seq
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MKTGGANPDPWERSQGKRLSRSSAGSQERIRLSLAHPGLLLLGIVLLVVLPSGESVKQNV
PRVKLSYKVLIQGGSVSVFLSPTDGLHSHSVLLDEERGRLLLGAKDSVYLLDPDNLSRAP
RKISWPSSRDTVEMCKLAGKNAQLECANFVRVLHNFNHTHLYACGTGAFHPICAFIEISG
RRVEGVFKLLSGTVESGRLKCPYDPWQPFTSVLTDQFMYAGTASDFLGKDTTFTRSLGPP
PDQHYIRTDISEDYWINEARFVSAHPVSDTYNPDDDKIYFFFRESSRDGNDKSVLSRVAR
VCKNDVGGLRSLTNKWTTFLKARLVCSIPGPDGVDTHFDELQDIFLLPTRDEKNPVVYGV
FTTSSSVFRGSAVCVYSMADIRAVFNGPYAHKEGPDHRWVEYEGRIPYPRPGTCPSKTYD
PRIRTTKDFSDEVVSFIRFHPLMFRSVYPLTSRPVFTRVRVDYTLTQIVVDRVMAEDGQY
EMLGQVLKVVSITQENWSTEEVILEELSVFQAPTPILSMEISSKQQQLYVGSGAGLAQVS
LSRCHLYGQVCAECCLARDPYCAWDGHTCSQYVPASKRRARRQDIKHGDPSSQCWDTEDT
LHGGRVEERTMFGVENNSTFLECLPKSQQTTTRWFIHRPGAEHREEVRPDDRVVHTGQGL
LIRSLHPADAGMYVCMAQEHTHFTHTLLRLTLRLISYGHLDGRPKPSKVPSVEVRPGAES
RQRYKDYLRVMSSPIGSLEEYCDSLWLEKRPANRRGGRGQGVYFGIV
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaagactggaggagcaaatcctgatccttgggagaggagccagggcaagaggctgtcc
aggagctccgctggaagtcaggagaggattaggctgtctctagcccacccagggctgctg
cttctggggatagtactgctggtcgtcctgccctctggagaaagtgtcaaacagaatgta
cccagagtcaaactcagctacaaagtgctgatccagggtggtagtgtatcagtgttcctg
agtcctactgacggtctccattcccactctgtgttgttggatgaggagagaggcaggctg
ctgctgggagccaaagactcagtctacctactggaccctgacaacctcagcagagccccc
aggaagatcagctggccatcctccagagacacagtggagatgtgtaaactggcaggcaag
aatgctcaattggagtgtgccaactttgtgcgtgtgctccataactttaaccatacccat
ttgtatgcctgtgggacaggagccttccacccgatatgtgccttcattgagatctcagga
cgcagagtggagggtgtgttcaagttgttgtctggtacagtggagtccgggaggttgaaa
tgcccttacgacccctggcaacctttcacgtctgtcctcacagaccagttcatgtatgct
ggcacggcatcagacttccttggtaaagacacaacgttcacccgctccttgggcccaccc
cccgaccagcactacatacgtactgacatctcagaggactactggatcaacgaggccagg
tttgtatcagcccatcctgtgtcagacacctacaacccagacgatgacaagatctacttc
ttcttccgcgagtcatcacgtgacggcaacgataagagtgtcctgtcccgcgtggcacgc
gtctgcaagaatgacgtgggagggttgaggagtctgaccaataagtggacaacgttcctc
aaagccagactggtgtgttccatccctggacctgacggagtggacacgcactttgacgag
ctccaggacatattcctgctccccaccagagatgagaagaaccctgttgtgtatggagtc
ttcaccacctccagctctgtgtttcgtggctcggcggtgtgtgtgtatagcatggctgac
atacgagctgtgttcaacggaccctacgctcacaaggaaggacctgaccatcgctgggta
gaatacgaggggagaataccttaccctcgccctggaacgtgtcccagtaagacgtatgat
cccaggataaggaccactaaagacttctcagatgaggtggtcagtttcatccgcttccac
cccctcatgttccgctccgtctaccccctgaccagccgacccgtgttcacgcgtgtacgt
gtcgactacacactgacgcagatagtggtggaccgcgtcatggctgaggacggacagtat
gaaatgctgggtcaggttctaaaggtggtgagcattactcaggagaactggtctactgag
gaggtgattctggaggagctctcagtgttccaggctcccactcccatcctgagtatggag
atctcttctaaacagcaacagctgtatgtgggttcgggggctgggctagcccaggtgtcc
ctgagcaggtgtcacctgtatggtcaggtgtgtgcagagtgttgccttgccagagatcct
tactgcgcctgggacggacacacctgctcacaatacgtcccagcatccaagaggagagcc
agaagacaagacatcaaacatggagacccatccagccagtgttgggacacagaggacact
ctgcatggaggcagggtggaggagaggacaatgtttggggtggagaataactccaccttc
ctggagtgtctccccaaatcacaacagaccaccacacgctggttcatacatagacctgga
gctgaacacagagaggaggtgaggccagatgacagagtggtccatacaggccaaggtctc
ctcattcgctctctccatcctgccgatgctggcatgtacgtgtgtatggcacaggagcac
acacacttcacacacactctgctccgcctcacgctgcgcctcatttcgtacgggcatctt
gacgggcggccaaagcccagcaaggtccccagtgttgaggttcgccccggggcagagtct
cgtcagcgctataaggactacctgcgtgtgatgagttctcccattggctcgctggaggag
tactgtgattcgctttggctggagaagaggccggccaataggagaggtggaagagggcag
ggggtgtattttggtattgtctaa
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