Oncorhynchus nerka (sockeye salmon): 115135084
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Entry
115135084 CDS
T07952
Symbol
ppp2r2d
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03015
mRNA surveillance pathway
one04261
Adrenergic signaling in cardiomyocytes
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115135084 (ppp2r2d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115135084 (ppp2r2d)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115135084 (ppp2r2d)
03036 Chromosome and associated proteins [BR:
one03036
]
115135084 (ppp2r2d)
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115135084 (ppp2r2d)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115135084 (ppp2r2d)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115135084 (ppp2r2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
115135084
NCBI-ProteinID:
XP_029525210
LinkDB
All DBs
Position
LG10:9427213..9432067
Genome browser
AA seq
447 aa
AA seq
DB search
MAGVAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNHSGELLATGDKGGRVVIFQHEQE
YKNRPNLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNSAHFLLSTNDKTIK
LWKIGERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASPRRVFANAHTYHI
NSISVNSDHQTYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPNQCN
VFVYSSSKGTIRLCDMRTAALCDSHTKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYM
MTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTG
SYNNFFRMFDRNTRKDITLEASRESSKPRATLKPRKVSTGGKRKKDEISVDSLDFNKKIL
HTAWHPKENVIAVAATNNLYIFQDKIN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttgccggtggaaatgattttcagtggtgtttctcacaagtgaaaggggcg
atagatgaagatgttgcagaagctgatatcatctcaacggttgaattcaaccattctgga
gagttgctagcaactggagacaagggaggcagagttgtcatatttcaacatgaacaggag
tataaaaatcgaccaaacctgcgaggggaatacaatgtttatagcacttttcagagtcac
gaacctgaatttgactacttgaaaagtttagaaattgaggaaaaaattaacaaaataaga
tggttaccccaacaaaactcagctcactttctactctcaacaaatgataaaactatcaaa
ttgtggaaaatcggtgaacgagacaagcgggctgagggttacaacttgaaagacgaagac
ggacgtctcagggatccctttagaattacttccctacgggtaccagtgctgatgcccatg
gatctcatggtagaagcaagtcctcgtagggtgtttgccaacgctcacacatatcatatt
aattcaatttctgtaaatagcgatcatcaaacatacctctccgcggatgatctaagaatt
aatctatggcacttggaaatcacagaccgaagttttaacattgtagacatcaagcctgcc
aacatggaggaactgacagaggtgatcacagcggctgagtgccatccaaaccaatgcaat
gtatttgtgtacagcagtagcaaaggcaccatacgcctctgtgacatgcgaacagcagca
ctctgcgatagccacaccaagttctttgaggagcctgaggatccaagcagcaggtcattt
ttctctgagatcatctcgtccatctctgacgtgaagttcagtcacagcgggcgctacatg
atgacacgggactacctctccgtcaaggtgtgggacctcaacatggagaacaggccagtc
gagacatatcaggttcatgaataccttcgcagcaagctttgctcgttatatgaaaatgat
tgcatcttcgacaagtttgagtgctgctggaacggtagcgacagtgccatcatgaccggc
tcctacaacaactttttccgtatgttcgaccgcaacaccaggaaggacatcacactggag
gcctctagggagagcagcaaaccgcgggctacactcaaaccccgcaaagtctccaccggt
ggcaagaggaagaaagacgaaattagcgtggacagcctggacttcaacaagaagatcctg
cacaccgcctggcaccccaaagaaaacgtcatcgctgtggcggccaccaacaacctgtac
attttccaggacaagatcaactaa
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