Oncorhynchus nerka (sockeye salmon): 115135089
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Entry
115135089 CDS
T07952
Name
(RefSeq) RNA-binding protein 12-like
KO
K24526
RNA-binding protein 12
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115135089
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115135089
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
115135089
NCBI-ProteinID:
XP_029525220
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Position
LG2:16575494..16593023
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AA seq
874 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGAIKGSKVSLLLSSKTEMQNMIELSRRRFETGNVEGAAGNGSRPGPTVRTGGRGSLPTT
LQGFSNTTPTTVTTAASAHETISNKNVSTFATTNMGNMPPSFSNNFSSPNLTMGSTMTTA
MSSLNSVPPPIPPLPTMPSLPPMPSIPPMPLPPPVSSMPPVPTVSPLTQGPPVLPMSHLS
HMGSMPPFNPGIPPPGGLASGLPLGTPNHMFLGHMNPLLNIQAHMKAAIGNSDELYVHLQ
GLPFSGTEMDIREFFRGLAVDSIRLVRDNMGRSSGRALAKFFSPQDTFEALKRSTGMLGQ
RYVDISPATERQWMSVSSGGIGVGGQAHSKFNNEPQDQHRRSNMSSASPSTRDRARSRSP
HNKEFCVYLKGLPYEAVNKQICEFFKNLDIVEDSIYIAYGPTGRATGEGFVEFKNEMDYK
VALGCHMQYMGSRFIQVHPISKNAMFEKIGSIRQRMQGGDKKNNSESVKSPRNCAHISNI
PYNVSKKDVRLFLDGISVFDESLKVLVDNSGNGLGQAIMQFRAEEDALNAERLHRQKLNG
RDAFVHLITFEQMKEIERNPPPQVKRGQKPQGNTQGQAHSHVQAQNPVQGHPFAGMTGDE
FNFLRNTVGNLGNGPFTPFTVPGNGLAGPPPPPLAASLGDVSLSIPPPMVAGHLPGAVLE
PPGFRPGSNNGPPGFGPEGLRGMPPFDNGPRKSRGLNHNNRGGGHGQSGGCPQSAFGPGS
DPLRGQSTGGPGNPRGPTIVKIQNMPFTVTVDEILDFFYGYQVLPGSVCLQFSEKGLPTG
EAMVAFESHKEATSAVMDLNDRPIGARKVKITLG
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcttgcagggtctcccgatagtggcgggcaccatggacatacgc
catttcttctctggattgactatcccggatggtggggtgcatattgtagggggtgaacat
ggtgaggcttttattgttttcgccacagatgaagatgccaggcttggcatgatgcgtaca
gggggagcaatcaaaggttctaaagtgtcacttttgctgagcagcaagacagagatgcag
aatatgatcgaacttagccgcaggcgttttgaaacaggcaatgtggagggagccgcagga
aacggtagcaggccaggccccacggttcgcacaggtgggaggggcagtttacccaccact
ttacaaggcttcagcaacaccacaccaaccacagtcaccacagctgcatctgcacatgaa
actataagcaacaaaaatgtgtccacgtttgccacaactaacatgggaaacatgcccccc
agtttcagcaacaacttcagcagcccaaatcttaccatgggatccactatgacaacagcc
atgtcctccctcaactctgtaccaccacctatcccccctttgccaaccatgccatccctt
ccacccatgccttccataccccccatgccacttccaccacctgtgtcctctatgcctcct
gttcccactgtgtcacctttaacccaaggcccccctgtccttcccatgagtcatctgtcc
cacatgggctcaatgccaccatttaacccaggcatcccaccccctggtggactggcctca
gggctgcctctaggaaccccaaaccacatgtttctgggccatatgaaccctctgttaaat
atccaggcacacatgaaggcagcaataggtaattcagacgagttatatgtccaccttcaa
ggcctgcccttctcaggtacagaaatggatattagggagtttttccgtgggttagcggtg
gactccatccgactggtcagggacaacatgggccggagtagcggcagggcgctggccaag
ttcttttcccctcaggacacttttgaggcactcaaaagaagcaccggaatgttagggcaa
aggtatgttgacatctctccggccacagagaggcagtggatgagtgtcagcagtggtggc
atcggggttggagggcaagcccactcaaaattcaataatgagccacaagaccagcaccgc
cgcagcaacatgagttcagcgtccccgtcaaccagagaccgtgcgaggtcccgctcccct
cacaacaaggagttctgtgtttacctgaaaggcctgccctacgaagcagtaaacaaacag
atctgtgagtttttcaaaaacttggatattgtggaagacagcatttacattgcttatgga
cccactggccgagctacaggcgagggctttgtcgagttcaaaaatgaaatggactacaaa
gttgcactcggctgtcacatgcagtatatgggtagccgattcatacaagttcaccccatc
agtaaaaatgctatgtttgaaaagattggttccattcgtcaaaggatgcagggtggtgat
aagaaaaacaactcagaatcagtcaagagccctagaaactgtgctcacatctcaaatatt
ccatataatgtgtcaaagaaagatgtccgtctgtttctagatggcatttcagtatttgac
gaaagtcttaaagttctggttgacaacagtggtaacggtctaggtcaggctattatgcag
ttcagggcagaggaggatgcactaaatgctgagagactacacaggcagaagttaaatggc
agagatgcctttgtacatttgatcacctttgagcagatgaaggaaattgagagaaaccca
ccaccgcaggttaaaagaggccagaaaccccaagggaacactcaaggccaggcacacagc
catgttcaggcacagaatccagttcaaggtcacccctttgccggtatgacaggagatgag
ttcaacttcctcagaaatactgtaggcaatttaggcaatggtccttttacgccgtttact
gtcccaggtaatggactagcaggcccccctccacccccacttgcagcaagtcttggggat
gtatcccttagcatacccccacccatggttgccggtcacttgcctggagcagttctggaa
cccccgggcttccgaccaggcagcaacaatggcccacctggctttgggccagagggattg
aggggcatgccaccttttgacaatggccctagaaagagcagaggcctcaaccacaacaac
cgaggaggtggccatgggcaatcaggagggtgtcctcagtctgcctttggccctggctct
gaccctctgagaggacaatcaaccggaggccctggtaaccctcgtggacctaccattgta
aagattcaaaacatgcctttcactgtaacagttgatgagattctcgatttcttttatggg
tatcaggtgctgcctggttcagtctgtctgcagttcagtgaaaagggcctgcccaccggt
gaggcaatggttgcctttgagtcacacaaggaggcaacatctgctgtcatggatttaaat
gataggcctattggggctaggaaagtgaagataaccctaggataa
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