Oncorhynchus nerka (sockeye salmon): 115135091
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Entry
115135091 CDS
T07952
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115135091
Membrane trafficking [BR:
one04131
]
Endocytosis
Others
Others
115135091
Endosome - Lysosome transport
115135091
Endosome - Golgi transport
115135091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
115135091
NCBI-ProteinID:
XP_029525219
LinkDB
All DBs
Position
LG10:complement(9642441..9694139)
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AA seq
1247 aa
AA seq
DB search
MVVSGSVWCWALLTCILISFYNTLTAYAEISWPASSTTTNVWFNRMDKLPLELRANLKSA
WVKVPKYIDKESTFSRDFRMETIDGKAVVPKGEEKLPKDLDGVIGKVPPDAVSTVRDKKA
PNRSKHFTADSKKSDSSFEVKDGTFDSSNRTRTKRSTSFGEYSDRGQIGGPGDAFSAEKL
VEPLQGVYSSRTEYRRTGEDARTSPRQSEPLLVTSTFPLSGDSAHNQAMGHWVGENSSVI
LTLTKQYDFNLGAFTESSLWRSVDYGSTYIKLNKKVGSTLACLYVCPTNKRKIMMLSDPE
LEQSVLISSDEGASFEKYPINFYMDGLLFHPTQENWLLASSPDNKVYSTMDFGRKWQLVS
ENVTPGRFFWAQTGLDREADVVHMETHIAKGRAQYVKCRAQRCTESNRQYLFPGYIDKNS
LVVQDNYVFVQVTKSGQASYFVSYMRESFKRIQLPKYCLPKDMHIISTNEKQVFSAVQEW
NQNDTYSLYISDSPGVYFTLSLENLRTRREPGGNVLVDLYKVEGINGIFLANKLVGHEVK
TFITYNKGQTWALLQAPNTDVAGNSLHCILPFCSLHLHLDTPVNPYLPGRIFSMDSAPGI
IVATGNIGTELSSANLGMFITSDAGNSWRQIFEEELGVWFLDNGGALVAVSLVATVPIRH
VWVSLDEGKKWDRHSFSLAPLFLDGVLMQPENHIITFTGHLSRVSEWQLIKIDYKAIFSR
RCMDGDYQTWHLHNKGEPCVMGEKQTFMKRRPGNRCMLAQDYSRVISSEPCICRTYDFEC
DYGYERQADGKCTAAFWFNPSTVTRSCSTSHNYLNSTGYRKVLSNNCKEGGKDVYSPRKQ
HCSPRPPRGLRLTTSQGELTATVGSNVTFLVYLDDGNSLWTHIQLDFGDGITFMYNLSRR
GDGIKHSYREDGIFRVTAHAENSQGYAISSLFLHITSPVERVYLSAPIVAIRKKEANLTA
VVWPVHHRTLTFFWWFENSSEPLITLDGSISYTFWKEGMNRIMVQVSSGCNILQDTKVII
VKDFFKSLLLSFSPALDEHNPDIPEWREDVGRVVRTAVSQVSGFPEERLLVSLFPGVPTT
AELFILPETQLPEHGKQNKEDLVSISNLVINSLNHGLVQFELKADTQIIVYITQLTLAPL
VYSNPIHSSSVMLMLLSVVFVGLAAFFIFKLKRKIPWIHVQAEENQEKEPEMIGTVGQNN
TMSKMKLSEFPTEKELMEKELKTRSRGEYGRNGERVITREFPTCTNV
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtctcggggtcagtttggtgttgggctcttttgacttgcattttaatctctttt
tacaatacgttgacggcatacgctgaaataagttggccagcgagttccacgacgacgaac
gtttggtttaaccgtatggataaattgcctctggagctgcgcgcaaacctaaaatccgca
tgggtcaaagtcccaaagtatatcgacaaggaatccacattttccagagattttagaatg
gaaacaattgatggaaaagccgtagttccaaaaggtgaggagaaattgccaaaggacttg
gacggagttattgggaaagtgccaccagacgctgtatctactgtcagagataaaaaggcg
ccaaaccgttccaagcattttactgctgacagcaaaaagtctgacagttcctttgaagtt
aaagacggtacatttgattcaagtaaccgtacgaggacaaagcgaagcacatcatttggc
gaatattcggacaggggtcaaattggaggtcctggtgacgcattttcagccgagaagctt
gtggagcctttacaaggcgtttacagttcgaggacagaataccgacgaactggggaggac
gcaagaactagcccgaggcaaagtgagccgcttctggttacctccactttccctctgtcc
ggagactctgcgcacaaccaggcaatggggcactgggttggagaaaacagcagcgtgatc
ctgaccttgacgaagcagtatgactttaacttgggtgctttcactgagagttctctgtgg
agatcagtggactatgggagcacttatataaaactgaataaaaaggttgggtcaaccttg
gcttgcctatacgtctgcccaaccaacaagagaaagataatgatgcttagcgacccagag
ctggagcaaagtgtactcatcagctcagatgaaggtgccagcttcgagaagtatcccatt
aacttctacatggacggtctgctgtttcatccaactcaggaaaactggctgctggctagc
agtcctgacaacaaggtgtacagcacaatggattttggaagaaaatggcagttggttagt
gagaatgtaactcctggccggttcttctgggcacaaactgggctagacagagaggcagat
gtggtccacatggagacccacatcgccaaaggacgtgctcagtatgttaagtgcagagct
caacgatgcacagaatcaaacagacaatacctgttcccgggatacatagacaaaaattct
ctggttgttcaggacaactatgtgtttgttcaggttaccaagtcagggcaggcgagttac
tttgtgtcctatatgagggaatcatttaagcgaattcagctacccaaatactgtcttcct
aaggacatgcacatcatcagtacaaatgagaagcaggtgttttctgctgtacaggagtgg
aaccagaatgacacctacagcctgtatatctcagactctccaggggtctacttcactctg
tctctagagaacctccggaccagaagagagccaggcggaaatgtactggtcgacctgtat
aaggtggaaggaataaatggcatatttctagccaacaaattggtgggccatgaagtgaag
acattcatcacctataacaagggtcagacttgggcccttctgcaagcccccaacactgat
gtggctggaaacagtctgcactgcatcctgccattttgttctctgcatctgcacctggat
acgccagtgaacccttacctgcctggacgcatctttagcatggactcagcacctgggatc
attgtagctacaggcaacattggtacagagctgtcctccgctaaccttggaatgtttata
acatctgatgctggaaatagctggagacagatttttgaagaagaactcggtgtttggttt
cttgacaatggaggtgctttagttgcagtttctttagttgcaacagtacccatccggcac
gtatgggtaagtctggacgagggtaagaaatgggatcgccacagtttctctctggctcct
ttgtttctggatggagttctcatgcagccagagaatcacatcatcactttcactggacac
ttaagccgtgtttcagaatggcagctgataaagattgactacaaagccatctttagcagg
agatgcatggatggagattatcagacttggcacctacataacaagggagagccatgtgtg
atgggagagaagcagacctttatgaaacggaggccgggtaaccgctgtatgctggcccag
gactactcccgagtcatatcctcagaaccatgcatctgcaggacatatgattttgaatgt
gattatgggtatgaacgtcaagccgatggaaagtgtaccgctgctttttggttcaaccca
agcactgtgacaagaagctgtagcactagccataactacctcaacagcacagggtacaga
aaggttttgtccaataattgcaaagagggagggaaggatgtgtactcccccaggaaacag
cattgttcccccaggcctcccagaggcctcagactgactaccagccagggagagctcacc
gccaccgtgggcagtaatgtcaccttcctggtgtatctggacgatggaaactcgttgtgg
actcatatccagctagactttggggacggcatcactttcatgtacaacctgagccggaga
ggcgatggaatcaaacacagctatagagaagatgggatcttcagagtgacagcacatgca
gagaacagccagggttatgccattagctccctgttcctacacatcaccagcccagtggag
cgtgtgtatctctcagctcctattgttgccatccggaagaaagaagctaacctaacggct
gtggtctggcctgtccaccacagaacactcaccttcttctggtggtttgaaaacagctcc
gagcccttaataaccttggatggaagcatctcgtacacgttttggaaggagggcatgaac
aggatcatggtccaagtgtcttctgggtgcaacatactgcaggataccaaggtcatcatt
gtcaaagatttcttcaaatccctgctgttatcgttctctccggctttggacgagcacaac
cctgacatcccggagtggagagaggacgtgggccgcgtggtgaggacagctgtatcacag
gtttctgggtttccagaggaacggctgttggtatcgttgtttccaggtgttccaacaaca
gcagaactatttatcctgcctgagacacagttgcctgaacacgggaagcagaacaaagag
gacttagtgagtatatcaaaccttgttataaattccctgaaccacggattggtccagttt
gagttgaaagctgacactcaaataattgtttacatcacacagctaactttggcacctctg
gtttactccaaccctattcacagtagctcagtcatgctgatgttgctgtctgtggtgttt
gttggtttagctgcatttttcatcttcaagttgaaaaggaaaatcccttggatccatgtc
caggctgaggagaaccaggaaaaggagccggagatgattggcacggtcgggcagaacaat
accatgtccaagatgaagctcagtgagttccccacagagaaggaactcatggagaaagaa
ctgaagaccaggagcagaggagaatatggaagaaatggggagagagtgatcacaagagaa
tttcctacttgtactaatgtctaa
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