Oncorhynchus nerka (sockeye salmon): 115135098
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Entry
115135098 CDS
T07952
Name
(RefSeq) tumor necrosis factor receptor superfamily member 6-like isoform X1
KO
K04390
tumor necrosis factor receptor superfamily member 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04060
Cytokine-cytokine receptor interaction
one04115
p53 signaling pathway
one04210
Apoptosis
one04217
Necroptosis
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115135098
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115135098
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115135098
04217 Necroptosis
115135098
04115 p53 signaling pathway
115135098
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115135098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
one04050
]
115135098
04090 CD molecules [BR:
one04090
]
115135098
Cytokine receptors [BR:
one04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
115135098
CD molecules [BR:
one04090
]
Proteins
115135098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
115135098
NCBI-ProteinID:
XP_029525235
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Position
LG10:complement(10081553..10088232)
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AA seq
333 aa
AA seq
DB search
MNKYTFLCVLCILCIVRSATTSKAEQSSQDITINLRTKRQSCQDGNYQYENKTCCLCAAG
HHLDNHCSMNTDDGTCILCELGRTYNSYPNFLDSCEPCTSCNPKANLEVEDKCTIIRDTV
CRCRQGHYCDKGKVHCRACYPCTICGDEGTKVACTTTNNTICHDYQKQGGGRTHAAVLGS
VMVIAVFLIFCCLRRTNKCCFGKKLGQNDGLTEMPNQNLEVAEEMQPLRGIDLWPHLPDI
AKTLGWKDMKQVAERSGMTIATIESHQLNYPNDSEEQCSSLLRAWVEKKGMTTASETLIH
SLRRMNKNAKANNIMAIISNKENTVSNSGLEQV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatatacgtttctatgtgtcctgtgcattttgtgtatagttcgttcagctaca
acttccaaagcagagcagagttcccaagacataaccatcaacttgcgcaccaaaaggcag
agttgtcaagatggcaattaccaatatgaaaacaagacatgctgtctctgtgctgctggc
catcatctggacaaccactgtagtatgaacacagacgatgggacctgtattctctgtgag
ctaggcagaacctacaacagttacccgaacttcctggactcttgtgagccctgcacatct
tgcaaccctaaagccaatctggaggtggaggacaaatgtaccatcatcagggacacagtg
tgtcgatgccgacagggccactactgtgacaaggggaaggtgcactgcagggcctgctac
ccatgtaccatatgtggggatgaaggtaccaaggttgcctgtaccaccaccaacaacacc
atatgccatgactaccaaaaacaaggaggaggaagaactcatgcagcagtacttggctca
gttatggttattgcagtttttcttattttttgctgtctgaggcgaacaaataaatgttgt
tttgggaaaaagctggggcaaaatgatggtttgaccgaaatgcccaaccagaatttagag
gtagctgaggaaatgcagccactgaggggtattgacctctggccacatctcccagatatc
gctaagaccttggggtggaaggacatgaaacaggtggccgagcgcagtgggatgactatt
gccaccatagaatcccaccagctaaactatcccaatgactccgaggagcagtgctccagc
ctacttagggcctgggtggagaagaaggggatgaccacagcctctgagacactgatccat
agtctacgccgcatgaataaaaatgccaaggcaaataatatcatggctatcatcagcaac
aaggaaaacacagtttcgaactccgggctagaacaagtgtag
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