Oncorhynchus nerka (sockeye salmon): 115135134
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Entry
115135134 CDS
T07952
Name
(RefSeq) elongation factor 1-alpha, somatic form
KO
K03231
elongation factor 1-alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115135134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115135134
03016 Transfer RNA biogenesis [BR:
one03016
]
115135134
03012 Translation factors [BR:
one03012
]
115135134
04131 Membrane trafficking [BR:
one04131
]
115135134
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115135134
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115135134
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115135134
Translation factors [BR:
one03012
]
Eukaryotic type
Elongation factors
115135134
Membrane trafficking [BR:
one04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
115135134
Exosome [BR:
one04147
]
Exosomal proteins
Proteins found in most exosomes
115135134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
115135134
NCBI-ProteinID:
XP_029525312
LinkDB
All DBs
Position
LG10:12781730..12791761
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSSSGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAAVFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKAVEKKAPSTGKVTKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggagaagctccacatcaacattgtggtgatcggccacgtggactctggcaag
tccaccaccactggccacctgatttacaagtgcggtggcattgacaagaggaccatcgaa
aagtttgagaaggaggctgctgagatggggaagggctcctttaagtatgcctgggtgctg
gacaagctgaaggcagagagggagcgtggcatcaccattgacatctcactgtggaagttt
gagaccagcaagtactacgtcaccattatcgacgcccccggacacagggacttcatcaag
aacatgatcactggaacctcccaggcagactgtgccgtgctgattgtggcagccggtgtg
ggtgaattcgaggctggcatctcaaagaacgggcagacccgcgagcatgccctcctggcc
tacaccctgggggtcaagcagctgatcgtgggcatcaacaagatggattccactgagccc
aactacagccagaagcgttatgaggagattgtgaaggaagtcagcacctacatcaagaag
attggctacaacccggatacggtagcctttgttcccatctctggctggaacggagacaac
atgctggaggccagtcctaatatgacctggtttaagggatggaagatcaccaggaaggat
ggcagttcgtccgggaccaccctgctggaagctctagatgctattcagcccccgtcccgc
cccaccgacaagcccctccgcctacccctgcaggatgtctacaagattggaggtattggc
acagtgcctgtgggccgtgtggagacgggcatgatcaagccaggcatggtggtgaccttt
gcccctgttaatgtgaccactgaggtgaagtctgttgagatgcaccacgaggccctgacc
gaagcaatgcccggtgacaacgtgggcttcaacgtcaagaatgtgtccgtcaaggacatt
cgccgtggcaatgtggccggagacagcaagaacgaccccccaatggaggcagcagtcttc
actgctcaggtgatcatcctgaaccacccaggtcagatcagtgctggctatgccccagtg
ctggactgccacactgcccacatcgcctgcaagtttgctgagctcaaggagaagattgac
cgtcgctcaggcaagaagctggaggacaacccaaaggctctgaagtctggagacgccgcc
attgtggacatggtcccgggaaagcccatgtgtgtggagagcttctcagagtaccctcca
ctgggtcgttttgcagtgcgtgacatgcgccagactgtggcagtcggggtgatcaaggct
gttgagaagaaagccccctccactggtaaggtcaccaagtctgcccaaaaggcccagaag
accaaatga
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