Oncorhynchus nerka (sockeye salmon): 115135222
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Entry
115135222 CDS
T07952
Symbol
tjap1
Name
(RefSeq) tight junction-associated protein 1
KO
K06105
tight junction protein 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115135222 (tjap1)
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Gene cluster
GFIT
Motif
Pfam:
Pilt
ATG17_like
7TMR-HDED
DUF4200
TPR
Exonuc_VII_L
HIP1_clath_bdg
OmpH
betaPIX_CC
Med9
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
115135222
NCBI-ProteinID:
XP_029525543
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Position
LG10:16615828..16693749
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AA seq
697 aa
AA seq
DB search
MTSATPARKPYRKAPPQHRESRNNLPSFLEDLSGSTPPALANTAGPNPPDPCQDSLSDAD
RIKILQQQNEELRRRLSHTTHKMEAMETEFETSRHYMQGEMGRTRDDLEKMRDKFRRLQN
SYTASQRANQDLEEKLHSLLRKVERDKKTTDQEIVELTNKLLDAKNTIDKLEELNERYRQ
DCNLAVQLLKCNKSHFRNHKFADLPYELQDMVNKHMKASLPDKSSQGAQGQDSDTMSLTP
ADVVPTSVIARVLEKPEPLVLNSAQSSSSAGRPQAEDVFVHVDMTGPQAEAGRGGRENGG
PRHSSRVSAQSNQAQELLQQNGMCRSQSSLSADGQPGEEGGGAFEKLNPYPAPPPPHPLY
PGRKVIEFSSDDKVKIPKNSPLPNCTYATRQAISLSLVQNDEENERQRTVPNSPAVSDGG
WRSGASSSSGGGGQRDPCRTPTQLETADPISSQSSPFSSPPQPPSAFASSGSSEEDLLAN
WQRMFVEKMAPSSEGTLVNRTSFSSETVKDLERTRTCKPGGEGSHRGALLGAYSDGEEGS
STRSWTASRESSLDTDTSSMADLRNRRGHYGADFSTEENEQLLRALDNDQDDASGDTVST
AITVETSLAEAKRNEFVEETGSVGSSAEERDILPQDLPVIVPRVLAGLEDYTENTPPLPG
NSSTSGRPLKSPKRMGVHHLHRKDSLTRAQEHGNLLD
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgctaccccggccaggaagccgtaccgcaaggctccgcctcagcaccgcgag
tcgcgcaacaacttgccctcgttcctagaggaccttagtgggagcacgccgcctgcgctt
gccaacaccgctggtcccaaccctcctgacccctgccaggactccttatcagatgcagac
aggatcaagatcctgcagcagcagaatgaagagcttcgccggcggctctcccacaccacc
cacaagatggaggccatggagacggagtttgagaccagccgccactacatgcagggggag
atgggtcgcacgcgcgacgacctggagaagatgagagacaagttccgcagactgcagaac
agctacaccgcctcccagagggccaaccaggacctggaggagaagcttcattccctgctc
cgtaaggtggagagagacaagaagaccacggaccaggagatagtggagctcaccaacaaa
ctcctggacgccaagaacaccatcgacaagctggaggagttgaacgagcgctatcggcaa
gattgcaatttggccgtgcagcttttgaagtgcaataagtcccatttcaggaaccacaag
tttgcagatctgccctatgagctgcaggacatggtgaacaagcacatgaaggccagtctg
ccggataagagttcccagggggcccagggccaggactccgacaccatgagcctgacgcct
gccgacgtggtgcccacctccgtcatcgcccgtgtactggagaagcctgagcctctggtg
ctcaactctgcccagtccagcagcagcgcaggccgaccccaggcagaggacgtgtttgtg
catgtggacatgacggggccccaggccgaggcaggaagagggggtcgagagaatgggggt
ccccgccacagcagcagagtctcagcccaaagcaaccaggcacaagagctcctccagcag
aacggaatgtgtcggagccagagcagcctgtcagcagacggccagccaggagaggagggt
ggtggggcctttgagaagctcaacccctacccagccccccctccgccccatcccctctac
cccggccgcaaggtgatcgagttctcctcggacgacaaggtgaagatccccaagaacagc
cccctgcccaactgcacctacgcaacgcgccaggccatctccctcagcctggtgcaaaat
gacgaggagaacgagcgccagcgcactgtgcccaacagccccgctgtgtcggacgggggc
tggcgctctggggcttcctcctcctcagggggaggggggcagcgtgacccctgccgcaca
cctactcagctggaaacagcagaccccatttccagtcagtccagccccttcagcagcccc
cctcagccccccagcgccttcgccagctcaggcagctctgaggaggacctgctggccaac
tggcagcgcatgtttgtggagaagatggcaccatcctctgagggcaccctggtcaaccgc
acctccttcagcagcgagacagtcaaggacctggagaggacccggacctgcaagccaggg
ggcgagggatcccacaggggggcactactgggagcctactcggacggggaggaggggtcc
tccactcgcagctggacagctagccgagagtccagcctggacactgacaccagcagcatg
gctgacctccgcaacaggaggggacattacggagcagacttctccacagaggagaacgag
cagctgctgagggccctggacaacgaccaagacgacgccagtggcgacaccgtgtcaacg
gccatcactgtggagaccagcctggcggaggccaagaggaatgagtttgtggaggagacg
gggtctgtaggcagctctgcagaggagagagacatcctgccccaggacttacctgtcatc
gtacccagggtcctggcagggctagaggactacacagagaacacccctcccctccccggc
aactcctccacttccggccgacccctgaagagcccaaagaggatgggagtacaccacttg
caccgcaaagacagcctgactcgggcacaggagcatggtaacctgctggactga
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