Oncorhynchus nerka (sockeye salmon): 115135269
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Entry
115135269 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi-like isoform X1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
one04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115135269
04082 Neuroactive ligand signaling
115135269
04519 Cadherin signaling
115135269
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115135269
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115135269
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
BBL5
Motif
Other DBs
NCBI-GeneID:
115135269
NCBI-ProteinID:
XP_029525621
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All DBs
Position
LG10:19494401..19563484
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AA seq
462 aa
AA seq
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MMAVLRSGVRVFIMLLISRMLENSLLSAEVKEGEILPPTIQKLMKGYNKYLRPFFDNGPV
TVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTF
IVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESW
GYNINDVMFYWTRGNESVSGLDTLRLAQYTVEDHYTSASEAIYETGHYPKLIFHFELKRS
ILYFILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANC
FIKAIDVYLGICFSFIFGALIEYAVAHFCTLNHPDANIVMYGHQMGGFDEEMNGMVTTIA
AENNRAKRRKEKAAADEAALAPTAELELYPSSPTGSEPKPEAPEEPPNRCLIVLVLLRKV
LRRAANCCHVENPHLIDNYSRMTFPLSFVFVNLLYWTYYLYL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgtgctccgctctggagtgagagtgttcatcatgctcctcattagcaggatg
ttagagaactcgctgctcagcgctgaagtgaaagagggagagattctgcctcccaccatt
cagaagctgatgaaaggatacaacaagtacctcaggcctttttttgacaatgggccagtg
actgtgggcatgagtttggacattgccagcattgacaccatatcagagatcaacatggac
tacacggccactatcttcctgcgtcagcgatggacagacgagcgcctggtgtttgagggt
aacaagagcctgagtctggacggcaggctggtggagctgctctgggtaccagacaccttc
atcgtagactccaaaaagtccttcctccatgacatcactgtggagaacaggctgatcagg
atcttccccaatggaacggtgctctacgccctgaggataaccaccactgtggcctgcaac
atggacctgaccaagtaccccatggacaagcagacctgcactctgcaactggagagctgg
ggctacaacatcaatgatgtgatgttctactggaccagagggaatgagtcggtcagtggt
ttggacacgctgcgtctggctcagtacacagtagaggaccactacacatctgcgtctgag
gccatctatgaaacaggccactaccccaagctgatcttccactttgagctgaagagaagc
atcctgtacttcatcctggagacgtacgttccctccagcctgctggtggtcctctcctgg
gtctctttctggatcagccagtcttccgtccccgcaaggatctgtatcggagtgaccacg
gttctgaccatgaccacgttgatgatgggtgccaggacgtccctgcccaacgccaactgt
ttcatcaaagccatcgacgtgtacctgggcatctgcttcagcttcatcttcggagccctg
atcgagtacgccgtggcccacttctgcacccttaaccatcccgacgccaacattgtcatg
tacggtcaccagatgggaggctttgacgaggagatgaacggcatggtcaccaccatcgcc
gctgaaaacaaccgggccaagaggcgtaaggagaaagctgctgcagatgaggcggcctta
gcgcccacagctgagctggaactttacccctccagccccactggcagtgagcccaagcct
gaggcccctgaggagccccccaaccgctgcctcattgtcctggtcctcctccgcaaggtc
ctgcgcagagctgcaaactgttgccatgtggagaatccccacttaatagacaattactcc
aggatgaccttccccctgtcctttgtattcgtcaaccttctctattggacatactacctg
tacttgtaa
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