Oncorhynchus nerka (sockeye salmon): 115135290
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Entry
115135290 CDS
T07952
Name
(RefSeq) poly(rC)-binding protein 3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115135290
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115135290
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
115135290
NCBI-ProteinID:
XP_029525670
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Position
LG10:complement(21082011..21093032)
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AA seq
439 aa
AA seq
DB search
MSDKEGGASEGGLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPER
IVTITGPTEGIFKAFSMIAEKFEEDITAAMTNSTVTSHPPVTLRLVFPGSQCGSLIGKGG
SKIKEIRETTGAQVQVAGDMLPESTERAVTMSGTPQAITQCVRHICSVILESPPKGATIP
YRPKTMPGAGHPVFQQQHQQQQHASQAFTIQGQYAFPHQDLTKLHQLAMQHIPLPSLGQS
NPTFPGMDASVATSSQELAIPNDFIGSIIGRQGSKINEIRQVSGAHIKIASATDGSPMRQ
VTIIGSPTSISVAHYLINVSLEMAKYTMQAASSASSVDLNNMSFSQSAPTVSTPTSMAVM
AATTQVPGSINMHSPSTLQSIPTQHYAVPVSSLLGMKTLPMLAMHPAAASGLLQGLSPYT
TKIPTAGMKKPERQKFAPY
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaggaaggtggggcctcagagggggggctgaatgttaccctcacgttgcgg
cttctgatgcatgggaaggaagtgggcagcataattggaaagaaaggggaaaccgtcaaa
aagatgagagaggagagtggcgctcgcatcaacatttcagagggatcttctccagagagg
attgttaccatcacaggaccaacagagggcatcttcaaagctttctctatgatcgctgag
aagtttgaggaggacattacagctgcaatgacaaacagcacggtaacaagccatcctcca
gtgacactccgccttgtgttcccagggagtcagtgtggctccttgataggcaaaggaggc
tccaagatcaaggagatcagagagaccacaggtgctcaggtgcaggttgcaggggacatg
ctgccagaatccactgagagagctgtcactatgtcaggcactcctcaggccatcacacag
tgtgtcagacacatctgctctgtcattctggaatcaccgcccaaaggagcaactatccca
tatcgccccaagaccatgccaggagccggccatccagtatttcaacaacaacatcaacaa
caacaacatgcttcacaagccttcacaattcaaggacagtatgcgtttccacatcaagat
ttgaccaagcttcaccagttggctatgcagcatatccccctcccttcccttgggcaaagc
aaccctaccttccctggaatggatgcctctgtcgccacaagttctcaggagctggcgata
cccaacgactttattggcagcataattggcagacaaggcagcaagatcaatgagattcgc
caggtgtcgggagctcacatcaagatagccagtgccacggacggatcgcccatgcgccaa
gtcacaatcataggctctcctaccagcatcagtgtggcacactacctcatcaatgtcagc
ttagagatggctaaatacaccatgcaggctgcttcctctgcgtcatctgttgacctcaac
aatatgagcttctctcagtctgctcccactgtctccacacccacctctatggctgtcatg
gccgccaccacccaagtccctggcagcattaacatgcactccccctccaccttacagtcc
atccccacccagcactatgccgtccccgtttccagtctgcttggcatgaaaacgctccct
atgctggctatgcacccagcagctgcctcagggctcctgcaaggtctatccccttacacc
actaagattcctactgctggcatgaaaaaacctgagcgccagaagtttgccccatattga
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