Oncorhynchus nerka (sockeye salmon): 115135304
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Entry
115135304 CDS
T07952
Name
(RefSeq) PDZ and LIM domain protein 1-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115135304
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115135304
Domain-containing proteins not elsewhere classified [BR:
one04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115135304
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Ehrlichia_rpt
Arc_trans_TRASH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
115135304
NCBI-ProteinID:
XP_029525708
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All DBs
Position
LG10:21685918..21700040
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AA seq
310 aa
AA seq
DB search
MPLRVVVQGPGPWGFRLVGGKDFEQPLTISRITPGSKAAQASLSVGDQILAIDGEPTESM
THLQAQNKIKGCLEEMILSVDRSETKIWSPLSSEDGKTNPYKMNLASEPQEVKPIGSAHN
RSALPFAGFGPKVVTNQYNNPAGLYSSENIKDFNTAVDDVKTIATAANEPSNIPTVADSE
VYKMLQENQEADEPPRQSASFKVLQEILESDPDKPSGFRSVKAPAAKMVSTVGNANKLPI
CDKCGSGIVGMVVKLRDKFRHPECYTCSNCDVNLKQKGHFFVEDQIYCEKHARERVTPPE
GYDVVTVFPK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctctacgggttgtcgtgcaaggtcctggaccttggggattccgtctagttggtggg
aaggattttgaacaacccttgactatctcgcggatcactcctggcagtaaggctgcccaa
gccagtctgagtgtcggggatcagatcctggccatcgatggagagcccactgagagcatg
actcacctgcaggcacagaacaagatcaagggctgcttagaggaaatgatcctctccgtc
gacagatcagaaactaaaatctggtcaccgctctcttctgaggatggaaagaccaacccg
tacaagatgaatctcgcatctgagccacaggaggtgaaacccataggttccgcccacaac
aggagcgccctgccattcgccgggtttggccccaaggtggtaaccaatcagtacaacaac
cctgccggtctctactcctccgagaacatcaaggactttaacacggccgtggatgacgtg
aaaacaattgccactgccgctaacgagcccagcaacatcccaacagtggcagactctgag
gtctacaaaatgctgcaggaaaaccaagaggctgatgagcctcctcgacagtccgcttca
ttcaaggtgctgcaggagattctggagtcagatcctgataaaccctctgggtttaggagt
gtgaaggcccccgccgcaaaaatggtctcaacggtgggaaatgcaaacaagttaccaatc
tgtgacaaatgtggatcagggattgtagggatggttgtcaagttgcgggacaagtttcgt
caccccgagtgctacacctgctccaattgtgacgtcaacctgaaacagaagggacatttc
ttcgtggaggaccagatctactgcgagaaacacgcacgcgagcgagtgactccacccgaa
ggctatgacgtggtcacggtcttccccaagtag
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