Oncorhynchus nerka (sockeye salmon): 115135311
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Entry
115135311 CDS
T07952
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 2-like isoform X1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
one01100
Metabolic pathways
Module
one_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115135311
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115135311
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
115135311
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
115135311
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115135311
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
SPX
SlyX
DivIC
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
115135311
NCBI-ProteinID:
XP_029525726
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Position
LG10:21847219..21856624
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AA seq
538 aa
AA seq
DB search
MPRRSFPLQGRMRWLFLGLVLLLVLFLFAYLLECTPPADVSLVLPGLGGESYGKEYYRAL
LQEQEEHHLSRAASLKRQIAQLKQELQQMSEKLKDLQDWKEGLGVQGLAETKDQVPGDLL
EFLHSQIDKAEVNTGARLPSEYALVPFESFNSGKVYQLEMGLTRHPEEKPVRKDRRDELV
EVIEAALDVINNPDEEDGQEDVPMQRQAYTESHFTEGLYRTERDKGTLYELFFAKEDSDN
FHHVTLFRPFGPLMKVRSTSVETSGVVINIIVPLAGRTDAFSQFLHNFREVCIKHDREVH
LTVVYFGQEGLREVKSYLEKMSREETFTNYTLIPVDEEFSRGRGLDIGARAWKKGDVLMF
FCDVDIYFTRDYLNTCLLHTAPNKRVFYPVVFSLYNPAIVYGNLELAPPIESQLIHKKDA
GFWRDFGFGMTCQYRSDFLNIGGFDLDVKGWGVEDVHLYRKYLRSDLIVTRTPVSGLFHL
WHEKQCADELTPEQYRMCIQSKAMNEASHSHLGMLVFREEIENHLRKQAYKTQGKTED
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggcgaagctttccgctgcagggacggatgcgctggctgttcctggggctcgtc
ctgctgctggtcctcttcctctttgcttacttgctggagtgcactcccccagctgacgtc
agcctggtcctgcctggcttgggaggggagtcctatgggaaggagtactaccgtgccctg
ctgcaagagcaggaggagcaccacctcagccgtgccgccagcctcaagcggcagatcgcc
cagctcaagcaggagctccagcagatgagtgagaagctcaaggacctgcaggactggaag
gaaggccttggggtccagggactggctgagaccaaggaccaggtgcctggggatctcctc
gaattcctccactcccagatcgacaaagccgaggtgaacacgggagcacggctgcccagc
gagtacgccctggtcccctttgagagcttcaactctggtaaggtgtatcaactggagatg
gggttgaccaggcacccagaggagaagcctgtgcggaaggaccgcagggacgagctggtg
gaggtcattgaggcggccctggacgtcataaacaacccagacgaggaggatggccaggag
gatgtgcccatgcagaggcaggcgtacactgagagccactttactgaggggctgtacaga
acagaacgggacaaaggcacactctacgagcttttctttgcaaaagaggactccgacaat
ttccaccacgttactcttttccgtccattcggtcctttaatgaaagtcaggagcacatcc
gtagaaacgtccggagtcgtcatcaatatcattgtaccattggcgggcagaacagatgca
ttctcacagttcctacacaacttcagggaagtttgcataaaacatgatagggaagtgcat
cttacggtggtctactttggacaagagggcttacgagaggtgaagtcttatttggaaaaa
atgtccagggaggagacttttaccaactacaccctcatcccagtggacgaggagttttcc
aggggcaggggtctggacatcggagcccgcgcctggaagaagggtgacgtgttgatgttc
ttctgtgatgtggatatctacttcacacgggactatctcaacacctgcctccttcacacc
gctccaaacaagagagtattttatccagtggttttcagtttgtataatcctgccatagtc
tatggaaatctggagctggctccccccattgaaagtcaacttattcacaagaaagatgct
ggattctggagagattttggctttggaatgacatgtcaatatcgctcagacttccttaat
atcggaggttttgacctggacgtgaaaggttggggtgtggaagatgtccacttgtacagg
aagtacctgcggagcgacctgatcgtgacgcgtacaccagtatctggcctcttccacctg
tggcacgagaagcagtgtgcagacgagctgactccagaacagtatcgcatgtgcatccag
tccaaagccatgaatgaggcgtcccactcccacctgggcatgctggtgttccgcgaggag
atcgagaatcacctccgcaagcaggcttataagacccagggcaaaactgaagactga
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