Oncorhynchus nerka (sockeye salmon): 115135315
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Entry
115135315 CDS
T07952
Name
(RefSeq) nucleolysin TIAR-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115135315
03041 Spliceosome [BR:
one03041
]
115135315
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115135315
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115135315
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Ortholog
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GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Nup35_RRM_2
RRM_Nup35
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
115135315
NCBI-ProteinID:
XP_029525733
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Position
LG10:21922251..21952436
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AA seq
406 aa
AA seq
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MEDESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQ
SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQT
FSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKESPDMAKS
VPQVEYGQGQWGQWNQMYGSPQAQQYGQQYMANGWQVPSYGVSYGQSWNQQGFGVEDSIL
AAAAQNISRQSQSPAWVGGFGSPAPSQPGPVMPNQGNFNMAGYQTQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaagccaccccaaaacgctgtatgttggtaacctgtccagagatgtaaca
gaaattttgattcttcagctgttcacccaaattggaccttgcaaaagttgtaaaatgatc
actgagcaacccgatagcaggaggatgaactcttctgtgggattttctgttttgcagcag
tcaagcaatgacccgtattgctttgtggagttctttgaacatagagatgctgctgctgcc
ctagcagccatgaatgggaggaagatattgggaaaggaggtcaaagtaaattgggccacc
actccaagtagccagaagaaagatacatcaaatcacttccatgtgtttgtgggagacttg
agccctgagatcaccactgaggatatcaaagctgcatttgcaccttttgggaaaatatcg
gatgctcgtgttgtgaaggacatgacgacaggaaaatctaaggggtatggatttgtgtcc
ttctataacaaactggatgcagagaatgccatcgtgcacatggggggacagtggttagga
ggacggcagatcaggaccaactgggcaactcgcaagccacccgcccccaaaaatgtgcaa
gacaatggctcgaagcagctgaggtttgaagatgtagtgaaccaatccagtccccagaac
tgcaccgtgtattgtggaggaatccagtcaggactgtcagagcacctcatgcgacagaca
ttctcaccctttggacaaataatggaaatccgagttttcccagagaaaggttactctttc
attaggttttcctcccatgaaagtgctgcccatgcaattgtctctgtaaatggaacgtcc
attgaatgccacatagtgaagtgctactggggcaaagaatcccccgacatggccaaaagc
gtaccacaggtggagtacggtcagggtcagtggggacagtggaaccaaatgtatgggagc
ccccaggcccagcagtatgggcaacagtacatggcaaatggttggcaagtgccttcttat
ggagtgtcttatggacagtcatggaatcagcaaggatttggtgtagaggattccattctg
gccgcagcagcacagaacatttcaagacagtcccagtccccagcctgggtgggagggttt
ggatccccggcgccgtcccagcccggtcctgtgatgcccaaccagggaaacttcaacatg
gctggctaccagacacagtga
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