Oncorhynchus nerka (sockeye salmon): 115135340
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Entry
115135340 CDS
T07952
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
one03029
]
115135340
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
115135340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Topo-V_HhH_2_2nd
Motif
Other DBs
NCBI-GeneID:
115135340
NCBI-ProteinID:
XP_029525802
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All DBs
Position
LG10:complement(23482769..23521147)
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AA seq
1388 aa
AA seq
DB search
MAARWGAGESMLTACNMDFFSTNTLDEAVILHGGLSSDSLELETGEALEALCCLDPSILS
IFEDTTTGENKVGLDEDNEATLLTALTEILDNVDNENLSPFDTLPDSDLLTGQKGREHSP
LRRLLCLSHSSPESETPCNTRQFSTGKSLPRTQESVQRSDGEEEEDAEACSPSLSPDRQP
SSPEQELLTWGGLSLPLEQHMDGESMSVSLGELVRHMHPYCMAVCVEDEGEERLLAEEGI
LLEVVEHGEHGETIFAIPDMGIPYAHLSLSLPGVEDSFNAEQRVPDEISEADMLETPESE
SANDVVVDDDAAKVAGPSDPAETLRAKASGENVIYRRPKEETVERCLSRRKKKRKNKVKR
SPAEVTPEPAQAEGRVLRSASHRGAAQESSPRKPIKETTRPEKKDKETFSSAISMAAPEA
PKQKTRATHAGETQHVQRQSHVEVTTLTLSTHRSVKVIPASDHVLKVMASDLLPVTMTPK
KLPQTTTGCEKPQSLLASAANPTAPQAMTINPAAPQALNPSERPVSVAPQAIMQSNSASL
AAPQVIPKPIKASQAIEPKPKPLSLQQYRLLRQQKKPAPLERPEDQSTKWPSLPDAPTEL
PPIPCLPIPSSRDPRRPHPSPGKTEVEVKAAWQPMGPGAPPTPEALLVPPAYMLASKSSS
PSKASSANASPITPPQQATVPTQQPAKASQSPISVVPSSSTVSVVPPPPQNPFVKRNIPQ
APHPALTNPLLQSQLPSKTVVLIKSQSSSGASSKTTTAANRPALIATIAQKPTPVAGALL
EKTFNCTTNAAAVSVQKPNPAAPLKVATTLQKGVVTLPRPKMPELPTVTPGSTPAKPYTT
QSSKPAVRCTTAQEAPKAKSPTQELIEAFTSEIGIEAADLTSLLEQFEETQAKEEQYVLE
VSGRAAAVGNSSVERPCDRAVVESVGAHDLASTAGLTPPATPPHQMWKPLVPVALLGKNR
VAETPKPSPSKAIQINARPLPANKLRSKPPSPPITPTNTVALTLAFSDHDYCLPQKEPVA
IAEEPGKRWNVKQQAAITIKTIEPLGSTTTRAPQRIPAPSLQTLIPALCTKTQQAPLPLD
VRTDRTSSVLGTPEASPTRQEQQVGPLEMSPKKGRSYRGHNITCSPSPREEKGGRERKRR
IHHSSSPCSTDSESDFNSSSSSSQSRSCSPPRKRYRPRHSKSSSSSSSCSSRSSSPSVSR
SPPRRRYSYSSSRSGSWSKSRSRSPHRRAWRRGSSPRSPSLRPGYRPESRENSQEVKRLK
EKAIEERRVVYVGRIRGTMTRKELRERFSLYGEIEECTLHFRDHGDNYGFVTYYDTKDAF
TAIENGGKLRKPDELPFDLCFGGRRQFCKASYADLDSNREYDPSPAKGKFDVLDFDTLLK
QAQKGLKR
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggtggggagcaggcgagtcgatgttaactgcctgcaacatggattttttc
tctacaaatacactggacgaggcggtgatcctccatgggggcctgtctagtgacagtctg
gagctggagacaggagaagctttggaggccctgtgctgtctggacccctccatactgtcc
atatttgaggacacaactacaggagagaataaagttggacttgatgaggataacgaggcg
acgctgctcacagctctgactgagatcctggataacgtggacaacgagaacctgtccccc
ttcgacacgctgccagactctgatttactgactggccagaaaggccgggaacactcgccg
ctgaggagactgctttgcttgtcccactcgtctccagagagtgagacaccttgcaacacg
cgacagttctccactgggaagagtctccccaggacacaggagtctgtccagaggagtgac
ggagaggaggaagaggacgcagaggcttgttctccctccctgagcccagacagacaaccc
tcgtcaccagagcaagagctcctgacctggggtggcctgtccctgcctcttgagcagcac
atggatggagagagcatgtcagtgagtctaggagagctggtcagacacatgcacccctat
tgcatggcagtgtgcgtggaggatgaaggggaagaacggctgctggcggaggaagggata
ctgctggaagtggtcgaacatggagagcatggcgagactatatttgccatcccagatatg
ggcatcccttatgctcatctctctctctccttgccgggagtagaagactcattcaatgcg
gagcagagggttccagatgaaatttctgaagcggatatgttggagactccagagtctgag
tctgcgaatgatgtcgtagttgacgatgacgcagcaaaggtggctggcccttctgaccct
gccgagaccctgagggcaaaagcaagtggtgagaatgttatctacaggagaccaaaggag
gagactgtagaaagatgtctgtctcgaaggaaaaagaaacggaaaaacaaagtgaagcgt
tcacctgctgaggtcacccctgagcctgcccaggcagaggggagggtcctgaggagcgcg
tcccataggggcgccgcccaggaatcctcgccccggaagcccatcaaagagacgaccaga
ccagagaaaaaggacaaagagacgttttcttctgccatatctatggccgcccccgaagcc
ccaaaacagaagacgagagcaacacatgctggcgaaacacaacacgtacagcgacagagc
catgtggaagtcacaaccttaacactatccacacaccgcagtgttaaggtcatccccgcc
tcagaccatgtgttgaaggtcatggcctctgacctgttgccagtgactatgaccccaaag
aaactcccccaaacaaccacaggctgcgagaagcctcaaagccttctagcttctgcagct
aacccaacagccccccaggcaatgacaatcaaccctgcagcaccccaggcgcttaaccca
agtgaacgacctgtgtcggtggccccccaggcaataatgcagtccaacagtgcctctcta
gcggccccccaggtgatccccaagcccattaaggcctcccaggctattgagcccaagcct
aagcccctgtccctccagcagtaccggctgctgcggcagcagaagaaaccggccccctta
gagagaccagaggaccagagcaccaagtggcccagcctccctgatgcccctaccgagttg
ccccctatcccctgccttcccatcccctcttccagagaccctcgtcgcccccacccctcc
ccagggaaaactgaggtggaggtgaaagcggcctggcagcccatgggaccaggagcacct
cctacacctgaagctctgcttgtgcctcctgcttacatgctggcctccaaatcatcttcc
ccaagcaaggcttctagtgcaaatgcatcccctataacccctccccagcaagcgactgtt
cctactcaacagccagctaaagctagccaatcccctatctccgttgtgccttcatccagt
actgtgagtgtagtacccccaccaccccagaacccttttgtgaagcgtaatataccccag
gccccccatcctgcacttacaaaccccctgctccagtcccaactaccctccaagactgtg
gtccttatcaaatctcagagctccagtggagcctcttctaaaaccactacagctgccaac
aggcccgccctaattgctactatagcccaaaaacccacccctgtcgctggtgctctactt
gagaaaacgttcaactgcaccaccaacgctgctgctgtttctgttcagaaacctaaccct
gcggctcctttgaaggtggctactactctccagaagggagtagttactctgccccggcct
aagatgcctgagctgcctacagtcactcctgggtctaccccagccaaaccctacactacc
cagtcctccaaacctgcagtgaggtgtactacagcccaggaggcccccaaagccaagagc
cctactcaggagctgatagaggcattcaccagtgaaattggtattgaagctgctgacctc
accagcctgctggagcagtttgaagagactcaagctaaagaggagcagtatgttctggag
gtctctggtagagcagcagctgtaggaaactctagtgtggagcggccatgtgacagggca
gttgtggagagtgtcggcgcacatgacctggcaagtactgcaggtctgacccctccagct
actcctcctcaccagatgtggaagcccttggtccctgtggcactccttgggaagaaccga
gtggctgagactcccaaaccatcgccctccaaggccatccagatcaacgcgaggcccctg
cccgccaacaagctccgaagcaagcctcccagcccccctataactccaaccaacacggtg
gctctcaccctggctttctcagaccacgactactgcctccctcagaaggagcctgtggct
attgctgaagagccaggcaagcgctggaatgtcaaacagcaagcagccatcaccatcaag
accatcgagccgcttggcagcaccactaccagggcaccccagaggatccctgccccctcc
ctccagaccctcattcctgctctgtgtacgaagacccagcaggctcccctacccctggat
gtaaggactgataggactagctctgtgctgggtacccctgaagcttctcccaccaggcag
gagcaacaggttggtcccctggagatgagtcccaagaaagggagatcctaccggggccac
aacattacctgctcccctagccccagggaagaaaagggaggacgcgagaggaaaaggaga
atccaccattcctccagcccttgttctactgactcggagtctgactttaactcctcctcc
tcctcctctcagtctagatcttgctctccacccaggaagaggtacaggcctcgtcactct
aagagcagctccagttcctcgtcttgctcctctcgttcctcctctccttccgtgtcccgt
tctcctcccaggcggcggtattcctactcctcttcccgatctggatcctggagtaagtcc
cgttcccgctctccccacagacgggcatggcgcagaggcagtagtccacgcagcccctct
ctcagaccaggttaccggcctgaatctagagaaaacagccaggaggtgaagagactcaaa
gaaaaagcgatcgaggagcgtagagttgtttatgtagggcgaatccgggggacaatgaca
cggaaagagctgagggaacgcttctctttgtatggcgagattgaggagtgcactctacac
tttagagaccatggggataactatgggtttgtgacgtactacgatacgaaggatgcgttc
acagccatcgagaatggtggcaagctccgaaagcctgacgaactcccctttgacctttgc
tttgggggaaggagacagttctgcaaggccagctacgctgatctagattctaaccgcgag
tatgacccgtcgcctgcaaagggcaagtttgatgtacttgactttgacactttactgaag
caggcccagaaaggtctgaagaggtaa
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