Oncorhynchus nerka (sockeye salmon): 115135342
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Entry
115135342 CDS
T07952
Name
(RefSeq) prominin-1-A-like
KO
K06532
prominin 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115135342
04090 CD molecules [BR:
one04090
]
115135342
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115135342
CD molecules [BR:
one04090
]
Proteins
115135342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
DUF885
MLKL_N
TctB
AgI_II_C2
Med9
WEMBL
Spectrin_5
CCDC90-like
Motif
Other DBs
NCBI-GeneID:
115135342
NCBI-ProteinID:
XP_029525814
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All DBs
Position
LG10:23589015..23624400
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AA seq
830 aa
AA seq
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MGAYRRVWRLGGCVGAVLAWIGALFLGSSLAQPPADSCPTGVTPLNLSQPQYQSVPGADT
GFMSGVVQSFLHTVQPNPFPKDLLVNLLEENGNIYHDDKTIKEVLLYEVGFLVCAAIGIV
YIILMPLVGFCLACCRCCGRCGGHMYQKQTKAVHCHRRGFYWATLLTTLVILSGNICMFF
SNQFLKGSVEDSSVELNNTLDNLQTYLTAVPQQIDSVLIGSNETVDEVTRSLNNIGNLLG
KEIQRRLEGPLKPSLQSVRDIANVVNSTSVLLVRLDSTLTQVRSDVSVVQANVSSVRDRI
NSTLRNPNCTACSAYQSELQKLTFATTIAVPSLSELQSAVNNVTEADLNSKVKEGEDFFA
SIPQKVTNDTKDVVQNVKQQLEDIKRQISEVKGNIPVSALRNISDTLGEAQRYIGMYSQQ
SERVEMIRWGVCIILSCAVLLVVVCNLLGLFLGPVGLSPKDEPTERSSTADCGGTFLMAG
AGLSFLFSWLFMLVVLVLFILGGNVYTLICQPWRSGQLLQFADTPGLIHGFNLGKRLGLK
SNLTLTEVYNDCEKNRPLWTTLHLYDLIDLNALLNVSKYTEEIQQHFDRNEIKLSTVTLL
TRDIRNQLHSFSDKAHDVDFGSVTQQINNISSIDLSETADRLDQLAAAQTGVKLELTREA
TDLREIQFYINTAIIPQLTHLNSTIDALGVIASHIDRTVGDVLREVGTAQDFLNTNTSQI
VKAESRGFLDCQMGYFTAYADWANFTITQQVGLCGPVAEAMDSAEVIVCSNMVQSLNAFW
FSLGWCMIFLVPSIVFSIKLAKFYRRMKHSDNYDNHIAMSIIPRAKVQPY
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgggagcatataggagagtttggaggttggggggctgcgtcggggcggtgttggcctgg
attggggcactgttcctgggttccagcttggcccagcctcccgctgactcctgtcctacg
ggagtcactcccttgaacctgagccagccccagtaccagtcagtcccaggagcagacaca
ggcttcatgtccggggtggtccagtccttcctccacaccgtccagcccaaccccttcccc
aaagatttgctggtgaatttattggaggaaaatggcaatatataccacgacgacaagacc
attaaagaggtccttctctatgaagttggtttcctagtgtgtgctgctatagggatcgtg
tacattatcctgatgcccctggtggggttctgcctggcctgctgtcgctgctgtggacgc
tgtggaggacacatgtaccagaagcagactaaagctgtccactgtcacaggagaggattc
tactgggctacgttactcaccacgctagtcatactttcagggaacatctgcatgttcttc
agcaaccagtttctgaaagggagtgtcgaggacagctctgtagaactcaacaatacactt
gacaacctccaaacctacctcactgctgtcccacagcaaattgatagtgtgctgataggg
agcaatgagacagtggatgaagtcaccagaagcctcaataatataggtaatctgctgggc
aaggagatccagagaaggctagagggccccctgaaaccttccctgcagtctgtcagagat
atagccaatgtggtgaacagtaccagtgtcctgctggtgaggttagactctactctaacc
caggtccggtctgatgtatctgtggtccaggctaatgttagctctgtcagagaccgcatc
aacagcacactgagaaaccctaactgtactgcgtgctcggcctatcagtcagagctacag
aaactaacatttgccaccactatcgctgtccccagtctgagtgagctgcagtcggccgtt
aataacgtcaccgaggctgatctaaactctaaagtgaaagagggagaagacttctttgcc
agtattccccaaaaagtgaccaacgacaccaaggacgtggtacagaatgtgaagcagcag
cttgaagacatcaagagacaaatctctgaggtgaagggaaacatccctgtctctgccctc
agaaacatctcagacacactgggagaggctcagagatacatcggcatgtactcacaacag
tcagagagggtagagatgatcaggtggggtgtgtgtattatcctgagctgtgcagttctc
ctggttgtagtgtgtaacctcctgggtctgtttttgggcccggttggactaagcccaaag
gacgagccaacagaacgatccagcaccgcagactgtggaggaaccttcctcatggcgggt
gcagggctaagtttcctgttttcctggctcttcatgctggtggtgttagtactgtttata
ctgggaggaaatgtctacacactcatctgccagccctggcgcagtggacagctactacag
tttgctgacactccaggcctgatacatggcttcaatttaggaaagagactgggcctgaag
agcaacctgacactcactgaagtatacaatgattgtgaaaagaacaggcctctatggaca
acactccatctgtatgatctcatagacctcaatgctttgctcaacgtgtccaaatacaca
gaagagattcagcagcactttgacaggaatgagatcaaactgtcgaccgtcaccctgctc
acccgcgacatacgcaatcagctacacagcttctctgacaaggcccatgatgtcgacttc
ggctctgtcacacagcagatcaacaatatttccagcattgatctgagtgaaacagcagac
aggctagaccaactggctgctgctcaaactggtgttaaattagagctgacccgggaggct
acagacctgagagagatccagttctacattaacactgccatcatcccacaactgactcat
ttgaactccaccatagatgccctcggtgtcatagcgtcgcacatcgatcgcacagtcgga
gatgtgttgagggaagtgggaacagctcaagacttcctcaacactaacacttcacagatt
gtcaaggccgagagtagggggttcctagactgtcagatggggtacttcacggcgtatgct
gactgggctaatttcacgatcactcagcaggttggtctctgtggcccagtggctgaagct
atggactcagctgaggttatagtctgctcaaacatggtgcaatctctgaatgcattctgg
ttcagcctgggctggtgtatgatcttcctggtccccagcatcgtcttctccatcaaactg
gccaagttctacaggaggatgaagcacagtgataactacgacaaccacatagccatgagc
atcatcccccgagccaaagtccaaccctactga
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