Oncorhynchus nerka (sockeye salmon): 115135366
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Entry
115135366 CDS
T07952
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115135366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115135366
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
115135366
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
115135366
NCBI-ProteinID:
XP_029525854
EnsemblRapid:
ENSONEG00000038334
LinkDB
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Position
LG10:24790865..24864012
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AA seq
578 aa
AA seq
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MLPSQAGSAQSGNGSASFRDNTGHGSGVIGIRPVLVRARQSKTRVSDSISAVGMLGGNGP
GVGARGGARPGNGTGPTIPQTAAQGGIGLNMGIGVRGGSRYDPDKECAPMGCSGSDADSD
SGDEDDPMSSIGDNRRSVKRERLEMEAAVTGQEAGIPPGGYGVVPQGVAGAKPGKKTRGR
VKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ
PMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSESESLGETKDQL
KPAFTVASLPGTTSTHALTAPTTSTTMQVSSGPSFPITNYLAPISASSNVNGTVLKTTGA
SGGQVMQLPSGFTFMSAGTSLPPGTPTIPLSQLHQHTLAIPGQRGQKLTASQLTQQGQQA
VFRFPAAVSLGGGMTQQLQAIQVHPTTHTNDSSSEISQTSTVSTATIVTSSVPTSMAGHM
MYTSPHTVMYASSPSAMQVSHGHGQDTGETTLDYSRLRWDTGAVPQVFLTAPSGTMQIPV
SAVQLHPMVIGQQLSSSSSNLTELQVVSLDTTQNTKND
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgctaccaagccaggctggatcagcacaatctggaaacgggtcagcgtctttcagggat
aacacaggtcacggttctggggtgattgggattcgccctgtgttggtcagagcaaggcaa
tcgaaaactcgggtcagcgacagcatcagtgcggtggggatgttggggggcaacggtcca
ggagtgggtgcaagaggtggggcgagaccagggaacgggacgggaccgacgattccacag
accgctgctcagggaggcatcggtctgaacatgggaattggggttcgcggaggcagccgc
tacgaccctgacaaagagtgtgcgccaatgggttgcagtgggtcggacgctgattcagac
tcgggggatgaagacgatccgatgagttcaatcggggacaacagaagaagtgtaaagcgg
gagagactggagatggaggctgcggtaacagggcaggaggccgggataccaccggggggt
tatggtgtggtcccccaaggtgtcgctggcgcaaagccagggaagaagacacgtgggcgc
gtgaagataaaaatggaattcatcgacaacaagttgaggcgatacacaacttttagcaag
aggaagaccggtataatgaagaaggcctatgagctttccacgttgacaggaacccaggtc
ctgctactggtggccagcgagacgggccatgtctacacgtttgccacacggaagctccag
cccatgatcaccagcgagacgggcaaggccctcatccagacgtgcctcaattctccagac
tcgcccccccgcaacgacccctccactgaccagcgtatgagcgccacaggcttcgaggag
acggaccttacctaccaggtgtctgagtcagagagccttggggagaccaaggaccagcta
aagcctgcgtttacagtggccagcctcccgggcaccaccagtacccacgcacttacggca
cccaccacatccaccaccatgcaggttagcagcgggccctccttccccatcaccaactac
ctggctcccatctccgctagcagcaacgtcaacggcacagtcctcaagaccaccggtgcc
tccggagggcaggtcatgcagctgcccagcggctttaccttcatgtcagcaggcacttct
ctccctcccggcacccccaccattccgctcagccagctgcaccagcacaccctggccatc
ccgggacagcggggccagaagctcaccgcatcacaactgacacagcagggccagcaggcc
gtcttccgattccccgctgcagtctccctagggggagggatgacccagcagctgcaggcc
atccaggtgcaccccaccacacacaccaacgacagcagctcggagatctcccagacctcg
actgtctccactgcgaccattgtcacatcgtctgtgcccacgtccatggcggggcacatg
atgtacaccagcccccacacagtgatgtacgcgtccagcccctcggccatgcaggtgtcc
cacggacatggccaggacacaggtgagaccacgcttgactacagtaggctacgctgggac
acaggtgctgtccctcaggtattccttacggcaccctcgggcaccatgcagatccctgtt
tctgcagtgcagctacacccaatggtgattggtcagcagttgagcagcagcagcagtaac
ctgacagagctgcaggtggtcagcctggacaccacccagaacactaagaacgactga
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