Oncorhynchus nerka (sockeye salmon): 115135458
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Entry
115135458 CDS
T07952
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1-like isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115135458
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115135458
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115135458
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
one04090
]
115135458
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115135458
Protein kinases [BR:
one01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115135458
CD molecules [BR:
one04090
]
Proteins
115135458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
BARF1_ig2
SpaA_4
Motif
Other DBs
NCBI-GeneID:
115135458
NCBI-ProteinID:
XP_029526019
LinkDB
All DBs
Position
LG10:complement(30830494..30854318)
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AA seq
978 aa
AA seq
DB search
MLFLALLLGIMVCCTSQEQSPPVIKLNSVVLREAAWTIPVGTSSFTLTCEGYSTVTWSTT
AFKLMRKTRLGSVITTRRLTVDYTGTYKCMYENQPDLISEVHIYVKDPHNILVTPRTLGD
VKEGSDVLLCQLTNPIATDLSVRMANGDPTPPDMNYTVNPKRGILIRYLLTSHSADYVCS
AKINGVTKVSKVVPIFVIQSLRLPPSVLIEVNGYVRIVGEQLLIPCITSNPNHFYNVTWK
HSSLKVLDFSHKMIQEDQSNQVHITSSVTIPAVAMSHTGNFTCTAMNEAGFNSSTTYLQV
VDKPYMRLIPRLSPDLYLNGSLVEVNEGENLEINIQIEAYPQIKEQWWDIPMSHNHNIST
HDDTWAVRFNNRYESSLLLQRVRSEERGQYTLHTRSTCLNGSITFNVQVYQKPSAMVRLK
NVTTLTCTASGYPAPTILWYQCPGIQNTCDGDNDTVEVQPLLTSTMEVQSELTLSPSSME
VTVECVTFNLVGKERDIFVLRVPAATLPTFVTPKLFTPTFIGATSTATLLFLLLVIVLYK
YKQKPKYEVRWKIIEANDGNNYTFIDPTQLPYNKKWEFPRDKLRLGQILGAGAFGKVVEA
TAYGLGTDDNMTTRVAVKMLKPSAHSEEREALMSELKILSHLGSHDNIVNLLGACTQGGP
MLMITEYCSYGDLLNFLHSKAKLFLYSIPSGPGTPEDPRVPENRDHYKNTCAQESRVRSD
SGISCSSSDNFLDMHPAQRPKHCPMVSLCEDPETGTWSLDIEDLLRFSSQVAQGMDFLAS
KNCIHRDVAARNVLLTDGRVAKICDFGLARDIENDSNYVVKGNARLPVKWMAPESIFECV
YTVKSDVWSYGILLWEIFSLGKSPYPNVVVDTQFYKMIKDGCYMSQPDFAPPEIYTIMKM
CWNLEPTERPTFSTIGQLIQRLLPDQPDHTYRNVQDKTPQQGAGEQGDPAKTNGDCDQTL
NQEGEEEPLMKKNHYQFC
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcctagcccttctcctgggcatcatggtctgctgcacatcccaagagcagagc
cctccagtgatcaagctgaactcggtggtgctgagggaggctgcgtggactatccctgtt
ggaacctcatctttcacattgacctgtgaggggtacagcacagtcacctggtcaaccaca
gcattcaaactcatgaggaaaactagactggggagtgtgattaccaccaggcgccttaca
gtagactacactggaacatacaagtgcatgtatgagaaccaaccagacctcatctcagag
gtccacatctatgtgaaagatccccataacatcttggtgacccctcgaaccctgggagat
gtgaaggagggcagtgatgttctcctctgtcagctgacaaaccccatagccaccgaccta
tccgtccgtatggccaacggagaccctacaccccctgacatgaactacactgtcaaccca
aagagaggaatcctcatccgataccttctgaccagccacagcgcagactacgtctgcagt
gcaaagatcaatggggtcacgaaagtctccaaagttgtccccatcttcgtcattcaaagc
ttgcgtttgccaccatctgtgctaattgaggtaaatgggtatgttcgtattgttggagag
cagctcctgatcccctgcattaccagcaaccctaaccacttctacaacgtgacgtggaaa
cactcctccctcaaagtattggacttttcgcataaaatgatacaagaggaccagagtaat
caagtgcacatcaccagtagtgtgactattccagctgtggccatgtctcacacaggaaac
ttcacctgtacagccatgaatgaggctgggttcaacagctccaccacctacctgcaggtt
gtagataagccttacatgaggctcataccccgcctgtcaccagacctctacttaaatggc
tccttagttgaagtgaacgaaggcgaaaaccttgagataaacattcagatcgaggcgtat
ccccaaatcaaggagcagtggtgggacatccccatgtctcacaatcacaacatctccact
catgacgacacatgggccgtccgattcaataacaggtacgagagcagcttgctgctacag
agagtgaggtctgaggagagaggccagtacaccctccacaccaggagcacatgcctcaat
ggctccatcaccttcaatgtccaagtctaccagaaacccagtgccatggtcagactgaag
aatgttaccaccctgacctgcaccgcctctgggtacccagctcccacaatcctctggtac
cagtgcccaggaatacaaaacacgtgtgatggtgataatgacaccgtggaggtgcagcct
cttctcaccagcaccatggaggtgcagagtgagctgaccctcagtccctcaagtatggag
gtcacagtggagtgtgtgacctttaacctggttggtaaagagcgggacatcttcgtattg
cgtgtccctgctgcgactttaccaacatttgtaacgcccaagctgttcacacccactttc
attggagccaccagcacagcaacccttctgttccttctgcttgtcatcgtcctgtacaaa
tacaagcagaaaccaaaatatgaagtccggtggaagatcattgaggccaatgatgggaat
aactacacctttattgaccctacacaacttccttataacaagaagtgggagttccctcgt
gacaagctgaggcttggccagattctgggagcaggggcttttgggaaagtagtggaggcc
actgcctatggtctggggacagatgacaacatgaccacgcgcgtggcagtaaagatgctc
aagccaagcgcccactccgaagagagagaagctctgatgtcagagctgaagatcctcagt
cacctgggatctcatgacaacattgttaacctgttaggggcgtgtactcaaggaggccca
atgctgatgatcacggagtactgcagctatggcgacctgctgaacttcttgcatagcaag
gccaagctgttcctgtactctatcccgagcggaccagggactccagaggatccacgggtt
ccagagaaccgtgatcactacaagaacacatgtgcacaggagtcccgtgtaaggagtgac
agtgggatctcctgctccagctcagacaacttcctggacatgcatccagcgcagagaccg
aaacactgtcctatggtttccctatgtgaggatccagagacaggcacctggtcgctggac
atagaagacttgttgaggttctcctctcaggtggctcagggaatggacttcctggcatcc
aaaaattgcattcacagggacgtggcggctaggaacgtcctcttgaccgatggccgtgtg
gctaagatctgcgacttcggcctcgccagagacatcgagaatgactccaactatgtggtg
aaaggaaatgcccgtctgccagtgaagtggatggcccctgagagcatctttgaatgtgtg
tacacagtgaagagtgacgtctggtcctatgggatactgctgtgggagatcttctctctg
ggtaagagcccataccctaatgttgtggtggacacccagttctacaagatgatcaaagat
ggatgctacatgtctcagccggactttgcccctccagaaatatacaccatcatgaaaatg
tgctggaacctggaaccaacagagcgtccaaccttcagtaccatcggccaacttatccaa
aggctactgcctgaccagccagaccatacctacaggaatgtgcaggataagactccacag
cagggggcaggagagcagggggatccggctaagacgaatggggattgtgatcagacactg
aaccaggagggagaggaggagcccctgatgaaaaagaaccactaccagttctgctga
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