Oncorhynchus nerka (sockeye salmon): 115135469
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Entry
115135469 CDS
T07952
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 2-like isoform X1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
one01006
]
115135469
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115135469
Prenyltransferases [BR:
one01006
]
Protein prenylation
Rab geranylgeranyltransferase
115135469
Membrane trafficking [BR:
one04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115135469
Endosome - Lysosome transport
Rab GTPases and associated proteins
115135469
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
Motif
Other DBs
NCBI-GeneID:
115135469
NCBI-ProteinID:
XP_029526035
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All DBs
Position
LG10:complement(31192565..31229048)
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AA seq
677 aa
AA seq
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MLSYSGQTLHPDSTRFRPLDGLSESVIAAACSRVGQRVLHVDRRNYYAGNWASFTFNGLL
SWIEEYKQAGQSEEAVREDWKEKLEEGEEALALSSMDTSISNLEVFCYASEEPEEEEVAA
AAAWSVPQTPDSEGEVERCLLESSSVEEEEPVVASDEASPASGPDAGAEQTQPEGQEREV
PSQIEETQGEAWQASPSPAERQPEPKKKITYTKIVKEGRRFNIDLVSKLMFSRGSLVDLL
IKSNVSRYAEFKNVTRILTYRNGKVEQVPCSRADVFGSKQLTVVEKRMLMKFLTFCLDFE
QHPEEYQDFSEHSFWDFLQTKKLTENLQHFILHSIAMVIPEVGTVEGLRATQHFLRCLGR
YGNTPFLFPLYGLGEIPQCFCRMCAVFGGIYCLRHSVQCLVLDKESGKCKAVIDTHGQRI
SCSHFVVEDGYIGADQRKNTDSRQISRAVLITDRSILPSDSEQQISLVTVPPVEPGGPLV
RIIELCSSTMTCMLDTYLVHLTCSSASGSAQEDLAPVVSRLFHTPASPGEEPAEGEEESR
GPTVLWALYFNMRDTSAVDRSSYDLPSNVHVCASPDTALGSDHSIKLAEAVFRQLLPDEE
FCPPAPNPEDIIYDGDGPQGEGPGFEEAAPAEGAGAQGGESAGRQEGKEAVGETKGAGES
VTPETGAGDEPSPTSDE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgttatcatactcgggacagacattacatcctgatagtaccaggttccgaccactagat
ggcctgtctgagtctgttattgcagccgcatgctcccgtgttggacagagggtcttgcat
gttgacaggagaaactactatgctggaaactgggccagtttcacattcaatggactgctg
tcctggatcgaggagtacaaacaggctggccagagtgaggaggctgtacgggaggactgg
aaggagaagctggaggagggagaggaggccctggcgctcagctcgatggacacgtccatc
tccaacctggaagtgttctgctacgccagtgaggaacctgaggaggaggaggtggctgcg
gcggcagcctggtccgtccctcaaacaccagactcagagggggaggtagagaggtgtctg
ctcgagagcagttctgtggaggaggaagagccagtggtggccagtgatgaggcgtctcca
gcctctggacctgatgctggggcagagcagacccaaccggaggggcaggagagagaggtg
cccagccagatagaggagactcagggggaggcttggcaggccagcccctctccagctgag
aggcaaccagagcccaagaaaaagatcacctataccaagattgttaaggagggacggagg
ttcaacattgaccttgtgtctaagcttatgttctctcgtggctcactggtggacctcctc
atcaagtccaacgtcagccgatacgcagagtttaaaaacgtcacccgcatccttacctac
cgtaacgggaaggtggaacaggtgccctgctccagggctgatgtttttggcagcaagcag
ctgacagtggtggagaaaaggatgctgatgaagttcctcaccttttgcctggactttgag
cagcacccagaggagtaccaggacttctcggagcattccttctgggacttcctgcagacc
aagaagctgacagagaacctgcagcatttcatccttcactccattgccatggtgatcccg
gaggtgggcacggtggaaggcctgagagccacgcagcacttcctgcgttgtctggggcgc
tacggcaacacgcctttcctgttccccctctacggcctgggggagatccctcagtgcttc
tgcaggatgtgtgctgtctttggagggatctattgtcttcgccactcagttcagtgtctg
gttctggacaaggagtccggcaagtgcaaagctgtgattgacactcatggtcagagaatt
agctgcagtcactttgtggtggaggatggctacattggggcagaccagaggaagaacacg
gattccaggcagatatccagagcggtcctcatcacagaccggtcaattctgccatccgat
tctgaacagcagatctccctggtcactgtgcctcccgtggagcctggtggtcccctggtc
cgtatcatagagctctgctcttccaccatgacctgcatgctagacacctatctggtgcac
ctgacatgttcctctgcctctggctccgcccaagaagacctagctcctgtggtgtccagg
ctcttccacacaccagctagtcctggagaggaacctgcagaaggagaggaggagagcagg
ggaccgacggtgctgtgggccctgtacttcaacatgagggacacctctgctgtggacagg
agcagctatgacctgcccagtaacgtacatgtgtgtgccagccctgataccgccctgggc
agtgaccactccatcaaactggccgaggcagtgttccgccagcttctccctgatgaggag
ttctgccccccggcccccaaccccgaggacatcatctacgatggggatgggcctcagggg
gagggcccgggctttgaggaggctgcaccagcagagggtgctggtgcccaaggaggagag
agtgctgggaggcaggagggaaaggaagcagtgggagaaacgaagggggcgggagagtcc
gtaacaccggaaactggggctggggatgagccgagccccaccagcgatgaatag
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