Oncorhynchus nerka (sockeye salmon): 115135475 Help Entry 115135475         CDS       T07952                                  Name (RefSeq) cysteine protease ATG4A-like   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one04136   Autophagy - other one04140   Autophagy - animal one04145   Phagocytosis Brite KEGG Orthology (KO) [BR:one00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     115135475    04140 Autophagy - animal     115135475    04136 Autophagy - other     115135475  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:one01002]     115135475   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:one04131]     115135475    03029 Mitochondrial biogenesis [BR:one03029]     115135475 Peptidases and inhibitors [BR:one01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    115135475 Membrane trafficking [BR:one04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     115135475 Mitochondrial biogenesis [BR:one03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     115135475 SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  115135475 NCBI-ProteinID:  XP_029526053 LinkDB All DBs Position LG10:31494106..31500633 Genome browser AA seq 415 aa AA seqDB search MEAVLAKYENQINVFSEFIEDLPDTDEPVWVLGECYNVKTEKTELLSDVHSRLWFTYRKK FSPIGGTGPSSDTGWGCMLWCGQMILAQALVCSQLGRAWRWRAEGGQPEEYHRILHCFLD RKDSCYSVHQMAQMGVGEGKSVGEWYGPNTVAQVLKKLALFDHWNSLAVYVSMDNTVVIE DIKKQCRQASRGSRLRPRPCGWGEPFNSGEIPEQACLHTHGNRATMCPHSQSQSHSDWRP LLLVIPLRLGINHINPVYIQALKECFKIPQSCGVLGGKPNLAYYFIGFVGEELIYLDPHT TQSAVESEAGSGVDDQSYHCLRSPRRMKITNLDPSVALGFFCKSEDDFDSWCNLVQQEIQ MKRNLRMFELVENHPPHWPPFVPPTKPEVQTTGAEFIESSDKLFESEEEFEILNV NT seq 1248 nt NT seq  +upstreamnt  +downstreamnt atggaggcagtattagccaagtatgaaaaccagataaatgtgttttctgaattcattgaa gacttgcctgacaccgatgaacctgtgtgggttttaggagagtgttacaatgttaaaaca gaaaagacagaactcctatcagacgttcactcgcggctatggttcacctacaggaaaaaa ttctctcccataggcggaacaggcccctcttcagatacaggctggggatgcatgctatgg tgtgggcagatgattcttgcacaggccctggtatgctcacagctgggacgagcctggcgt tggagggcagagggaggacagccagaggagtaccatcgtatcctccactgtttcctggat aggaaagacagctgttactccgtacaccaaatggctcagatgggagtcggtgaagggaag tctgtgggagagtggtatggcccaaacacagttgcgcaagtactcaagaaacttgcatta tttgatcactggaattctcttgctgtgtatgtgtcaatggacaacacggtggtgatcgag gacatcaagaagcagtgtcgccaggcaagcagagggagcagattgcggcccagaccctgt ggctggggggaacccttcaactctggagaaataccagagcaagcctgtttgcacacgcac gggaacagagccacgatgtgtccacattctcaatcccagtctcattctgactggaggccc ctgctgctggtcatacctctccgtttgggaatcaaccacatcaaccctgtctacatccag gccctcaaggagtgttttaaaataccacaatcctgtggtgtgctgggaggaaagcccaat ctggcctattacttcatcggatttgtaggagaggagctgatctacctggacccccacacc acccagtcagccgtggagtcagaggctggcagcggagtggacgaccagagctaccactgt ctgaggagtccacgccgcatgaagatcaccaacctggacccctctgtggccctgggattt ttttgtaagagtgaggatgactttgacagttggtgtaacctggtccagcaggagatccag atgaagaggaacctgcggatgtttgagctggtggagaatcacccgccccactggcccccc tttgttcctcccaccaaaccagaggttcagaccacaggggcagagttcatcgaatcgtcc gacaagctgtttgagtctgaggaggagtttgagatccttaacgtgtga

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