Oncorhynchus nerka (sockeye salmon): 115135578
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Entry
115135578 CDS
T07952
Name
(RefSeq) zinc finger BED domain-containing protein 4-like isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115135578
04121 Ubiquitin system [BR:
one04121
]
115135578
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
115135578
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
115135578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF7477
Motif
Other DBs
NCBI-GeneID:
115135578
NCBI-ProteinID:
XP_029526268
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All DBs
Position
LG10:34183465..34187857
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AA seq
950 aa
AA seq
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MTINHSVEVYIDVLALNWMLEKAQSTVLIVSKAFPTITAIYACNTICGGKNTVISDNSNM
DFRGYPLSSSLAPNLRRRGERGATGLVLDRRKSTVWNYYIQLNEMYVECNICKRQLSFHN
STTTMREHLVRKHNIRDNAPPVLDNTAVAGAPIPATSLQPMAQPGFPCNISTTSATANTC
MFQTDLHIVVKEEQQDADLSPEQGMAKRARITCAPPLDVGGGANAIPVTSQNLEPSNSNA
GLLYSENNNFGDTNRSGITTKESNGKRTGVLTDLILEMVYRDLQPLSVVEERGFRLLLSY
LEPQYPVPSPSQLGSLLWHHYDVLKRHLQQYLQSGLAPRCITLCTEYWQSVAGCAVGAGG
RLFFTVSAHFVDKDWRLARCVLQTCPMPDIREKICERGFIQFGDTLKAVLSEFHLPQSSV
FCVVHDTPRISEARGTENMGVPKEKVNRTAGPHQSPQDLPEGWVALHCAGEALKLCIQDG
LWMEPVRQALAEARRIISHFQHDAPAAAALIHKAEAANKAGACLVLDDPGRWATAIDMCE
SLLELKWVVSSVLEEQKAAPNLADHQWRLLQELVPVLKTVRIAASFLSEDINLSISALMP
CLHGVSRVLEQHIAETSCPVARGVMETVRSGMERQWRLGEEEALLDSPAVLSSFLDPRFK
ELRFLSPHARSRLHDKVKELLSAQAQIEVEEMSRECDKGGEDEDDEVGREKEVRNRGLDH
SQSTIAPLDSPVSCESNEEGDIIVLQQQLKGLSQTAPSQVSGEGLGEGSRCSAGNGPRRV
AGLSSLLKGDLQPPAYRQVSHVPKSMYDILLGEDPTERMPEIHQQLENYIAEPLCKRSLS
PLHWWRSKEHRFPAVARLARTFLAIPATAVPADRAFAPRETTVAQRRAILGPQHLDHILF
LHQNSDYVEKLMGGSTGHEERGSDRNGAKQTLYQSLVSYESKAWVGGEKL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgactatcaaccactcagttgaagtttacatagacgttttggctttaaattggatgcta
gaaaaagcacagtctactgttctcattgtgagcaaagcttttcctaccatcacagcaata
tacgcttgcaataccatttgcgggggaaaaaacacagtgatttccgacaactctaacatg
gatttccgagggtaccccctgtccagcagtctggccccaaatttgaggagaaggggcgaa
cggggagcaacaggactggttctggataggcgcaagtcaaccgtttggaattactacatc
cagcttaatgagatgtatgttgagtgtaatatatgcaagaggcagttgtcttttcacaac
agcactacgactatgagggagcaccttgtccgcaaacataatatacgcgacaacgcgcca
cctgtacttgataacacagcagtggccggggccccgattccagctacatcgctccagcca
atggcccagcccggattcccctgcaacatctctactacatctgccacagccaacacatgc
atgttccagacagatttgcacatagttgtaaaagaggagcagcaggatgctgacttatct
cctgaacaagggatggccaaacgtgcccgaatcacatgtgctcctcccctagatgtagga
ggcggtgccaatgcaatccctgtcaccagccaaaatttggaaccatcaaactcaaatgct
ggattactatatagtgagaacaacaactttggtgataccaaccgtagtggtatcaccacc
aaagaatccaatggcaagcgtactggtgttctgactgacctaatattggaaatggtgtac
agggacttgcagccactgtctgtggtggaggagaggggatttcgtctcctattgagctac
ttagaaccacagtacccagtgccgtctccctctcagcttggcagccttctttggcatcac
tatgatgttctgaaacggcacctgcagcagtatcttcagtctggcctggctccacgttgc
ataacactttgcactgagtactggcagtccgtagcaggttgtgcggtgggagcaggcggt
cgcctcttcttcactgtaagtgcacattttgttgacaaagactggcgcttggcccgttgt
gtgctgcagacctgtcccatgcccgatatcagggagaagatttgtgaaagagggttcatt
caatttggggacacgctgaaggcagttctctctgaattccatcttccccagagctctgtt
ttctgtgttgtacatgacactcccaggatctcagaggccagagggactgagaatatggga
gttccgaaagaaaaagtgaatcgtactgctggaccacaccaatcacctcaggatctccca
gaaggctgggtagcgttacactgtgcaggggaagctcttaaactctgcatccaggacgga
ctatggatggaacctgtcagacaggctcttgcggaggcccgcaggattatctcacatttc
cagcatgacgcacctgctgccgccgctctgatccacaaggcagaagcggcgaataaggca
ggcgcttgtctagtgctggatgacccagggcgctgggcaactgctatcgacatgtgtgag
agtctgctcgagctgaagtgggtggtgagctccgttctcgaggagcagaaagctgctcca
aatttagcggaccaccagtggcgcctcctccaggaactggtgccagtacttaagaccgtg
cgcatcgctgcctccttcttgagcgaggacatcaatttgtccatctccgcccttatgccg
tgcctgcatggtgtatctcgtgtcctagagcaacatatcgcagagaccagctgccctgtg
gctcggggagtaatggagacggtgcggtcagggatggagcgacagtggagactgggtgaa
gaggaagccttactggacagccctgccgtcctctcctcattcctggacccgaggtttaag
gagctgcgcttcctcagcccacatgcacgtagtaggctgcacgacaaggtcaaggaacta
ttatctgctcaagcacaaatagaggtggaggaaatgagcagagagtgtgacaaaggaggc
gaggatgaggatgacgaagtgggaagggaaaaggaagtgaggaatcggggattggatcac
tcacagtcaaccattgctcctctggattcacctgtgtcctgtgaatcaaatgaagagggg
gacattattgtgctgcagcaacagttaaaggggctgtcccagactgccccgtcacaggtc
agtggagagggactgggtgaaggctcacgctgcagtgctggaaatggtcccaggagagta
gcaggactgtctagcctgttaaaaggagacctgcagccccctgcttataggcaagtgagt
catgtgcccaaaagcatgtacgacatactgcttggagaggatcccactgagcgaatgcct
gagatccaccaacagctggagaactacattgcagagccgctgtgcaaacgcagcctgtca
cctctccactggtggcgctctaaggagcatcgcttccctgccgtggccagacttgcccgc
acatttctggctatccctgctactgctgtgcctgcagacagggcctttgctcctagagag
actactgttgctcaacgcagggccattctggggccccagcatttagatcatattctattc
cttcaccagaacagtgactatgtggagaaactgatgggagggtctacagggcatgaagag
aggggcagtgacaggaatggagccaagcagactctgtatcagtctttagtgtcatatgag
agcaaggcttgggtgggaggggagaagttgtga
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