Oncorhynchus nerka (sockeye salmon): 115135664
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Entry
115135664 CDS
T07952
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03440
Homologous recombination
one04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115135664
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115135664
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115135664
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115135664
03036 Chromosome and associated proteins [BR:
one03036
]
115135664
03400 DNA repair and recombination proteins [BR:
one03400
]
115135664
Peptidases and inhibitors [BR:
one01002
]
Metallo peptidases
Family M67
115135664
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
115135664
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
115135664
BRISC complex
115135664
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
115135664
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
115135664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
DUF7385
Motif
Other DBs
NCBI-GeneID:
115135664
NCBI-ProteinID:
XP_029526428
LinkDB
All DBs
Position
LG10:36402795..36409334
Genome browser
AA seq
260 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSSAATEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVIPHEAIGKVCLESAVEL
PRILCQEEQDTYRKIHSLTQLDPITKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNK
QNIIELQLEKERLTQELATM
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgagcgcagttcacctcgaatcagatgcttttttggtttgcatgaatcatgca
ttaagtaccgagaaggaggaagtaatgggactctgcatcggggaggtggacaccaaccgc
attgtccacattcattctgttattattctccgacggtcggacaagaggaaggatcgcgtg
gaaatttcgcctgagcagctgtcttcagcggcaaccgaagcggagaggttggctgaaatg
actggacggccgatgcgtgtagttggttggtaccactctcacccccacatcactgtgtgg
ccatcacatgtggatgtgaggacacaggctatgtatcaaatgatggaccagggctttgtt
gggctgatattctcctgcttcattgaggataagaacacaaaaaccggtcgagttctctac
acctgcttccagtctgtccaagcccagaaaggctctgagtacgagagaatcgagatccca
attcatgtgattccacacgaggccattgggaaagtgtgccttgaatcagcagtggagctt
cccagaatcctctgccaggaagagcaggacacctacagaaagattcacagcttaactcaa
ctggatccgatcacgaagatacacaatggctcagtcttcactaagaacctgtgcagccag
atgtctgctgttagtggtcccctgctgcagtggctggaggatcgtctggagcagaacaaa
cagaacatcattgagctgcagctagagaaagagagactaactcaggagttggcaaccatg
tga
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