KEGG   Oncorhynchus nerka (sockeye salmon): 115135676
Entry
115135676         CDS       T07952                                 
Name
(RefSeq) period circadian protein homolog 1-like isoform X1
  KO
K21944  period circadian protein 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:one03400]
    115135676
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    115135676
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 115135676
NCBI-ProteinID: XP_029526444
LinkDB
Position
LG10:36883401..36892232
AA seq 1501 aa
MSDENAYTTSGNDTSGVGLAEDAVAGQEACSQSAESGLSQTGSSNGNGQRTRSGGKSSNS
DDTDAHLSGNDSAEREVEGHMGHEASTCSSSHNGKDSAMETTESKSSNSHSTSPPNSSMV
YSLLSGSSEQDHPSTSGCSSGQPARLQTQRELLKALKELKIRMPADHRTKGRSSTLASLQ
YALNCVKQVRANQEYYHQWSVEESHGCSLDLSAFTTEELDNITSEYTLQNTDTFSVGVSF
LSGKVVYISPQASPMLRTKPERLQGALFSELLAPQDVSTFYSSTAPCRLPPWASCTGSMT
SPVDCTQEKSMFCRISGGRDSDGEVRYYPFRMTPYQLTLRDSDMSQPQPCCLLIAEKVHS
GYEAPRIPADKRIFTTSHTPSCLFQEVDERAVPLLGYLPQDLVGTPVLMYLHPDDRPVMV
AIHKKILQSAGQPFEHSPLRMCARNGEYLTIDTSWSSFVNPWSRKVAFIVGRHKVRTSPL
NEDVFTPTVEVEARAMSPEIPRLSEQIHRVLVQPVHSGGSQGYCSSHGSHPQRPSPGSSS
GSNSPSTKELILKTIQRPQQMTFQQMCKDVHMVKTNGQQVFTKSRNRPALRKHASTGALV
VPENLNKDLGALGPTKTLASVQSRKDPSANYSYQQINCLDSIVRYLESCNVPNTVKRKCG
SSSCTTSSTSDDDKQRELPGTAKDLKGHQSNEGSKGGPQMSPLALHCKAESVVSVTSQCS
FSSTIVHVGDKKPPESDIVMMEETPATPTLTVTSPAPATNNAITMLVTPRPLALPSPAPP
SPAQPDRDGRRSAGCSGRLGLTKEVLSAHTQQEEQVFLSRFRDLGQLRVLDPGPPPLRGL
TTTPKGVCSSKDYPAGGHGRRRGRGGKRLKHQQEGSQRGMNGSFRREGQGPQGLTFPMGQ
PLMMQGPLTSSSSWPASEASLPPAVAQYPPGVLPFFPLYPSVQQQVLAHTGVNPNAMQMG
YPSPQPGLPYPMHTMPLAPPMMVVLPNYMFPQLNGGVSPLNTTMPQYSTTIPNLCPGIPG
MAQLNQALPLFKQTIPLPQLNPGLAQFNPAVTQMNGMPRVSPALAQLNPSQVKPTLSMIP
QHCYDPSPALPFPNPIPIPSFALPEMDPTFVQRGNSRSSTPQSTCQAPLEGTDSPLFQSR
CSSPLNLLQLEELPGNRQEGMSTGAQQTLPPPGSVSQFGGQGSVKRSMKGDDREDDNDNA
DDQDAMSTSSDLLDLLLQEDACSGTGSAASASGSSGSGSNGCSTSGSGTRSSNTSKYFGS
VDSSENDHFHKQAPGGAEEAQLMKYVLQDPIWLLTANTDDKVMMTYQMPTRDRETVLRED
GMILRAVQKQQPRFTEEQKRELIQVHPWMGTGRLPQAINSPTCTGCGSPPTSSAPRPFNV
ELQDTDLTRVLQLQEETPVTMATDTYDTSIPPPQAPQTETKRGERQGEQERDGRDTRVKE
LEVTSSSGTEKGDSGCKRQPRSSIWPMTLKRNALGQPGAKVTVNVLCLNKEENMDKESKN
T
NT seq 4506 nt   +upstreamnt  +downstreamnt
atgagtgatgagaatgcatacaccacttctggaaatgacactagtggagtaggtttagca
gaagatgcggtggcaggacaagaggcatgctctcagtccgctgagtctggactgagtcag
actggcagctccaatggaaatggacagaggactcggtctgggggcaagtcctcaaactct
gatgacaccgatgcccacttgagcgggaacgactcagccgagagagaagtggaaggtcac
atggggcatgaggcatcaacctgcagcagctcccataatgggaaggactctgccatggag
acaaccgagagcaaaagctccaactcccacagcacttcccctcccaacagctctatggtc
tacagcctgctgagtggcagctcagagcaggaccacccatccaccagcggctgcagcagt
ggccagccggcccggctgcagacccagagagagttgctcaaggccctgaaggagctgaag
atccgcatgcctgcagaccaccggacaaaaggccgctccagcactctggcctccctgcag
tacgctctcaactgtgtcaaacaagtcagagcgaatcaggagtattaccaccagtggagt
gtggaagagagccacggttgcagtctggacctctcagccttcaccacagaggaactggac
aacatcacctctgaatacacactccagaacacggacacattctctgttggagtgtccttc
ctctctgggaaggtggtgtacatctctccccaggcctctcccatgctgcgcactaaacct
gagcgactacagggagctctcttctctgagctgctggccccccaggacgtcagcactttc
tacagcagcacggctccctgccgcctgcccccctgggcctcctgtactggctccatgacc
tcccctgtggactgcacccaggagaaatccatgttctgccgtatcagtggtgggagggac
agcgacggggaggtgaggtactaccccttccgtatgaccccctaccagctgacactgcgg
gactctgatatgtctcagccacagccctgctgcctgctcatcgctgagaaggtgcactca
ggatatgaagctccccgtatcccagctgacaagaggattttcaccactagccacaccccc
agctgtctctttcaggaagtcgatgaaagggctgtgccgttgctaggctacctgccccag
gacctggttgggacccctgtcctcatgtacctccaccctgatgacaggcctgtcatggtg
gccatacacaagaagattctccagtcagcgggccagccctttgaacactcgccccttcgt
atgtgtgcccggaatggggagtatctcaccatagataccagctggtcctccttcgttaac
ccctggagccgcaaagtggccttcatcgttggtcgacacaaagtcagaacgagtcccctg
aacgaggatgtgttcacgcctactgtggaggtggaggcgcgggccatgtctccagagatc
cccaggctcagtgagcagatccaccgcgtgctggtgcagcctgtccacagtggcggctcc
cagggctactgcagctcccacggatcgcacccacagaggcccagcccaggctcctcgtca
ggcagcaacagcccctccaccaaggagctcatcctgaagaccatccagagaccacagcag
atgacattccagcagatgtgtaaggacgtccacatggtgaagaccaatggtcagcaggtc
ttcaccaagtcccgcaaccgcccagcactccgcaaacacgccagcactggagccttggtg
gtgccagagaatttaaacaaggacttgggagctctggggccaactaaaaccctggcctcc
gtgcagtcaaggaaagacccgtcagccaactactcctaccagcagatcaactgtctggac
agcatcgtacgctacctggagagctgcaacgtccccaacacagtgaagaggaaatgtggc
tcctcctcctgcaccacgtcatcaacgtcagacgatgacaagcagagggagttgcctgga
acagctaaagatctcaaaggccaccagagtaatgaagggtctaaaggggggccacagatg
agccctctggcgctgcactgcaaggctgagagtgtggtctctgtcacgtcccaatgcagc
ttcagcagcaccattgtccacgtaggtgacaagaagcccccagagtcagatatagttatg
atggaggagacaccagccacccccactctcaccgtcacctctccagccccagccactaac
aacgccatcacaatgttagtgaccccccggccattggccctgcccagcccggcaccaccc
agccctgcccagcccgatagggacggccgcaggtcagctggatgctcaggccgcctgggt
ctgaccaaggaggtgctgtctgcccacacccagcaggaggaacaggtgtttctgagccgg
ttcagagacctgggacagctccgcgtgctggaccctggccctcctcctctgagaggactc
accaccacacccaaaggagtgtgcagctcgaaggactacccagcaggtggtcatggacgg
aggaggggccgtgggggaaagaggctgaagcaccagcaggagggctcccagcgtgggatg
aacggtagtttcaggagggaagggcaggggccccaaggcctcacgttccccatgggtcaa
cccctgatgatgcagggacccctgacctcgtcctcttcctggcccgcctctgaggccagt
ctccctcctgccgtggcccagtaccctccaggagtcctgcccttcttcccactctacccc
agcgtgcaacaacaagtcctggcccacaccggagtgaaccccaatgccatgcagatgggc
taccccagcccccagccaggcttaccgtaccccatgcataccatgccgttggctccccca
atgatggttgttctgcccaactacatgttccctcaactcaacggaggtgtatcaccgctc
aataccaccatgcctcagtatagcacaaccataccgaacctttgccccggtatccctggt
atggcacaacttaaccaagcactaccgctgttcaaacagactatcccactaccacaactc
aaccctggattggctcagttcaaccccgctgtgacgcagatgaatggcatgcctcgtgtt
agtcccgccctagctcaactcaacccgtcacaggtcaaaccgactctgtcgatgatcccc
caacactgttacgatcccagcccagcattacctttcccaaatcccattccgattcccagc
tttgccttacccgagatggatcccacctttgtccaacgtggcaactcccgctccagcacc
cctcagtccacgtgccaagcccccctggaggggacagactcgcccctcttccagtcacga
tgctcctcccccctcaacctgctacagctggaggagttgccaggcaaccgccaggagggc
atgtcgacaggggcgcagcagacattgcccccacctggctcggtatcacagttcggaggt
caaggctctgttaagcgaagcatgaagggtgacgacagagaggacgataacgataatgct
gatgaccaggatgcaatgtccacctccagtgacctgctagacctactgttgcaggaggac
gcctgctcaggcaccggctcggccgcctctgcctccgggtcctcaggctctggctctaat
ggatgcagcacctcagggagtggcacaagaagtagcaacaccagcaaatactttggcagc
gttgactcgtcggagaacgaccatttccataagcaggcaccagggggggctgaagaggcc
cagctcatgaaatatgtccttcaggaccctatctggctccttacggccaacacggatgac
aaggttatgatgacgtaccaaatgcccaccagggacagggagactgttctcagggaggat
ggtatgatactgagggcggtgcagaaacagcagccgcgcttcactgaggagcagaagaga
gagctgatccaggtccatccctggatgggcaccggacgcctgccacaggccatcaacagc
cctacttgtacagggtgcggttctcctcccacttcctccgccccccggccctttaatgtg
gagctgcaggacacggatctgacaagggtcctccagctacaggaagagacccctgttacc
atggcaacagacacatatgacacctccatcccaccaccacaagcaccccagacagagact
aaaaggggtgagcggcaaggggagcaggaacgagacggtagggacaccagagtgaaagag
ttggaggtgacgtcatcatccggaacagagaaaggggactctggctgtaaacggcaacca
aggagttctatatggccaatgactctaaaacgcaatgcattgggacaaccgggagccaag
gtcactgttaatgtgttgtgtttgaacaaagaagagaacatggataaggagtcaaagaat
acctga

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