Oncorhynchus nerka (sockeye salmon): 115135680
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Entry
115135680 CDS
T07952
Name
(RefSeq) GRB10-interacting GYF protein 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115135680
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115135680
Surveillance factors
Other surveillance factors
115135680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Beta-prop_WDR11_1st
MRP-S32
Motif
Other DBs
NCBI-GeneID:
115135680
NCBI-ProteinID:
XP_029526456
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All DBs
Position
LG10:complement(37079514..37097750)
Genome browser
AA seq
1079 aa
AA seq
DB search
MTAETLNFGPECCLGEDNGRCISNLNLRLRALSRGGSVTSPPPSPAMPKSKLADYRYGRE
EMLALYIKDNKPPEDMQDKEFAAIMQDEPVQPLALEPLTEEEQRNFSMSVNSVAVLRLMG
KGGGAAPVGVSRGRGGCIRGGRGRGEGAFYQRVPGGPDEGEVGFGRGREMLRSQSWDDRA
ERPRFEKPIRCAEVVRPGFEEAGPPGRKDSWRADSDNWRTLREEEEEAAAAGGEQPAWRV
AGSRRDGITTYTLYPECICACFSMSDGDSLNNTDGGPRSAGWRDRGGRRKFEFEFRDGEG
PRRESDRDGLPEWCTDEEDGEMGTFDSSGAFMCIKKDCKDTITEEDLEFEALEEEEENDQ
GGKDNNADRDLLSFYSFHLDECEAAGEGEDEYKTPSPPAISGSPPSDPLPAPCATQAPIS
HPTKTNYVLPAEGCPLPGSGAQLSPDPPSTTTSSLMPPPSGSLLPSTGGEAEEDEGMKHL
QQEAEKMVASLQDTSLEEECFTQALQESHTITSHSHTHPAPHSHTHTAGHTHSTHRDCAL
PLSHEAAMKWFYKDPQGEIQGPFSTVEMCEWFQAGYFTMTLLVKRGCDEGFQPLGDVIKM
WGRVPFSPGPSPPPLLVRQPPPSRGSSGNMDQELLKKHLEQAATAALYQQLQMRFQHMNR
SGDSSMMPSMNRSMSVPDNGSMWDMHTSASQQSGGEANLWDLTMSHSTQGPSLEQLQKLQ
DRREAELRAKREEEERKRQVEKRRQQEEQKRRDEEELYRRKQQCRQQQELIMKLLQQAQP
GAPGCVSGSGWSGSQASALSKQGKSLGLLELETERLLKQQAQHQRAQHQRDRHGGLSMGQ
WGEGSVGMWSGGGMEPKGSSGGMGVWEEAVKNQNSLRNMGMKNSRSSPSLSEQYMLRKKR
TEEEDKLLKLLQGMKPQDGFTTWCEQMLHALNTSANNSSSSLDVATIVAYLKEVESPYEV
HDFIRSYLGDTMEAKEFAKQFLERRAKQKANHQRQQQQQQLSKEVSGLSMNNFPIQVGSV
QSMFQAAQMGKGGMYDSQAAKMKKKQTMMLHSDPSILGYSFLSAGDRMNLGEMETVEDY
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaacttcggcccagaatgttgtctaggggaagataatgggcga
tgcatatccaacctaaacttgaggctccgtgcactatccagaggggggagtgtgacgtcc
cctcctccttctccagccatgccaaagtccaagctggctgattaccgctatggccgtgag
gagatgctagcactttatataaaagataacaagcccccagaggacatgcaggataaggag
tttgctgctatcatgcaggatgagcctgtgcagcctttggccctggagcctctaactgag
gaggagcagagaaacttctccatgtctgtgaacagtgtggctgtgctgaggctgatggga
aaaggaggcggggctgcccctgtaggcgtgtctaggggccgtggaggatgcatcagagga
gggagagggagaggtgaaggtgcgttctaccaaagagttcctggaggtcctgatgaagga
gaggtgggcttcggtcgtggccgggaaatgctccgcagccaaagctgggatgaccgagct
gagaggccaaggtttgagaagccaatcaggtgtgctgaagtagtgcgtccagggttcgaa
gaggcggggcctcctggcaggaaggactcctggcgtgctgacagcgacaactggcgtacc
ctccgagaggaggaggaagaggcagcagcagcaggaggagagcagccagcttggagagtt
gcaggatcccgccgggatggtataaccacttacaccctctacccagaatgcatttgtgca
tgtttctctatgtctgatggagactccctcaacaacacagatggaggtcctcgttctgca
ggctggcgtgatcgtggcggccggaggaagtttgagtttgaattccgtgacggcgagggc
ccccgcagggaatccgacagggacggccttcctgagtggtgcaccgacgaggaggatgga
gagatgggaacctttgactcctctggggccttcatgtgcatcaagaaagactgtaaggac
accatcactgaagaggatctggagtttgaagctctggaggaagaggaggagaatgatcag
ggaggcaaggacaacaacgctgacagagacctcttgtccttctactcctttcatctagat
gaatgtgaagcagcaggtgagggagaagatgagtacaagactccttctcctcctgccatc
tctggctctccaccctcagaccctcttcctgccccctgcgccacacaggcacccatctcc
catcccaccaaaacgaactatgtgctgcccgctgaaggctgcccacttccagggagtggt
gcccagctcagcccagaccccccctccaccaccacttccagcctgatgcctcctccctcc
ggatctctcctcccctcaacagggggagaagcagaggaggacgagggcatgaagcacctg
caacaggaggctgaaaagatggtggcctcactgcaggatacgtcccttgaggaggagtgt
ttcactcaagcactacaggagagccacacaatcacctctcactctcacacacacccagcc
ccacactctcacacgcacaccgctggacacacacactcgacccatagggactgtgccctg
cccctctcccacgaggcagccatgaagtggttctacaaggatccccagggagagatccaa
ggtcccttctccacggtggagatgtgtgagtggttccaggccggctacttcaccatgacc
ctgctggtaaagaggggttgtgatgagggtttccaacccctgggtgacgtcatcaaaatg
tggggccgcgtgcccttctcccccggcccctcccccccgcccctcctggtgagacagccc
ccaccatctcgggggtcctctggcaatatggaccaggagctgcttaagaaacatttggag
caggcagccactgcagctctataccagcaactacagatgaggttccagcacatgaacagg
agtggagattctagcatgatgccctctatgaacaggtccatgtcagtacctgataatggg
tccatgtgggacatgcatacctcggcctcccagcagtcaggtggtgaggccaacctatgg
gacttaaccatgagtcattccactcaggggccatcgctggagcagctacagaagctccag
gaccggcgtgaggctgaactcagggccaagcgagaggaggaggagcgcaagcggcaggtc
gagaagaggaggcagcaggaggaacagaagaggcgtgatgaggaggagctgtacaggcgt
aagcagcagtgtcggcagcagcaggagctgatcatgaagctgctgcagcaggcccagccc
ggggcaccagggtgtgtctctgggtcagggtggagcggctcccaggcctcagccctctcc
aaacaaggcaagagcctcggcctgctggagctggagaccgaaaggctgctcaaacagcag
gcccagcaccagagggcccagcatcagagagacaggcatggaggcttgtctatgggccag
tggggtgaggggtctgtgggcatgtggtctggtgggggcatggagcccaaaggcagctct
ggagggatgggtgtctgggaggaggctgtgaagaaccaaaacagcctccgcaatatgggc
atgaagaacagccgcagcagcccatctctcagtgagcagtacatgctgaggaagaagcgt
acagaggaggaggacaagctgcttaaactgctgcagggcatgaagccccaggatggcttc
accacctggtgtgaacagatgctgcacgcactcaacacctctgctaacaactcctcctcc
tcactggacgtggcaaccatcgtggcctacctgaaggaggtggagtctccctacgaggtc
catgactttatccgctcctacctgggcgacaccatggaagccaaagagtttgccaagcag
ttcctggagcgccgagccaaacagaaagccaaccaccagagacaacagcagcaacaacag
ctatcaaaggaagtttcagggctgtccatgaataactttcctatccaggtaggctccgtc
cagtccatgttccaggcagcccagatgggaaagggaggaatgtatgacagtcaggctgca
aagatgaagaagaaacagaccatgatgcttcactctgaccctagcatcttaggatattca
ttcctgagcgctggggacaggatgaacctgggtgagatggaaacagtggaggattattga
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