Oncorhynchus nerka (sockeye salmon): 115135701
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Entry
115135701 CDS
T07952
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115135701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115135701
03012 Translation factors [BR:
one03012
]
115135701
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115135701
Translation factors [BR:
one03012
]
Eukaryotic type
Release factors
115135701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
115135701
NCBI-ProteinID:
XP_029526535
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All DBs
Position
LG10:complement(37873752..37878791)
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AA seq
446 aa
AA seq
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MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVTLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRCHGAEGLAMVEKGTDEKTLYLTPEQE
KDKSHFTDKETGQEHELIESMPLLEWFANSYKKFGACLEIVTDKSQEGSQFVKGFGGIGG
ILRYRVDFQAIEYQGEDDELFDLDDY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccaacgcagcagacaggaacgtggagatatggaagataaagaagttg
atcaaaagtctggaagctgctcgggggaatggtacgagtatgatctccttgattatccct
ccaaaggatcagatctccagagtggccaagatgttggctgatgagtttggcactgcatcc
aatattaaaagcagagtcaacaggctctctgtgctcggagccatcacctctgtacagcag
agactcaaactctacaataaagtgcctcccaacggcttggttgtatactgtggcaccatt
gtgacggacgagggcaaagagaaaaaagtcaatattgactttgagccttttaaacccatc
aacacttctctgtatctctgtgacaacaagttccacacagaggctcttacagccttgctg
tcagatgacagcaagtttggttttattgtgattgatggaagtggcgccctcttcggaacc
ctgcagggaaacaccagggaagtgctgcacaagttcactgtggacctacccaagaagcac
ggcagaggagggcagtctgccttgcgttttgctcgtttgaggatggagaagagacacaac
tatgtccgaaaggtggcggagacggcagtcacgctttttgtttccaatgacaaggtcaac
gtagcaggcatggtcttggctggttcagctgacttcaagacggagctcagccagtccgat
atgtttgacccgaggctacaagcaaagatcctgaagctggttgacatatcatatggtggg
gagaatgggttcaaccaggccattgagctgtccgcagaagtgctttccaatgttaaattc
attcaggagaagaaacttataggacgatactttgatgagatcagccaggatacagggaag
tactgctttggggtggaagacacactgaaagccctggaaatgggtgctgttgagattctg
attgtctacgagaacctggataccatgagatacatcctgagatgccacggagcagaggga
cttgctatggtggagaagggtacagatgagaaaacattgtatttgacaccagagcaggag
aaagacaagtctcacttcacagacaaagagactgggcaggagcatgagctgatcgagagc
atgccgttacttgaatggttcgccaacagctataagaagtttggagcctgtctggagatt
gtcactgacaagagtcaagaaggatcccagtttgtcaagggctttggtggaattggtggg
atcttgcggtacagggtggatttccaggccatagagtaccaaggagaagacgatgagtta
tttgatttggatgactactag
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