Oncorhynchus nerka (sockeye salmon): 115135712
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Entry
115135712 CDS
T07952
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115135712
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115135712
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
115135712
NCBI-ProteinID:
XP_029526614
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All DBs
Position
LG1:complement(9046361..9217272)
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AA seq
747 aa
AA seq
DB search
MALFSTGPQSLGSYYCLIRRRFKRRRKKRSERQGGAGARQPRAQQKLFTMDVDEEENMSS
SSTDVKENRNLDNVSSKEGAAVGEQLPNGSGGGSRKRPLEEGNNGHTLSKFRAKKRKKTP
GPVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMTVEVNGQLFEGSGPTKKKAKLNA
AEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETPAPPEDSFYLGS
NGSSSLNSLGEYPLPSTPGANLAQAPLPPPSSFTSNSSGKNPVMILNELRPGLKYDFVSE
SGESHAKNFVMQVSVDSQQFEGSGRNKKLAKARAAQAALSALFNMQLDQTPSRQPIPREG
LQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDVKEAQVICVSTG
TKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYAQLEHFLSNNKEEQQKSIFMRCDKRG
YRLKDNVQFHLYISTSPCGDARIFSPHEAGMEDQGDRHPNRKARGQLRTKIESGEGTIPV
RTSNTIQTWDGVLQGERLLTMSCSDKIARWNVLGIQGSLMSYFTEPIYFSSIILGSLYHA
DHLSRAMYQRIADIEDLPQQFSLNRPLLSGISNAEARQPGKAPNFSVNWAVGDQALEVIN
ATTGKDDMGRASRLCKHALYSRFIRLHSKLSSTLRIKVSKPSSYHDAKEAAVEYHNAKQT
LIKVFHKSGLGAWVKKPIEQDQFSLNS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggccctgttcagcactggccctcagagcctgggctcctactactgcctcatccgcagg
aggttcaagaggaggcgcaagaagcgcagcgagcgccaaggtggagccggagctaggcag
ccccgggcccagcagaagctcttcaccatggacgtggatgaagaggagaacatgagttcg
agcagcaccgacgttaaggaaaaccgtaacctggacaacgtctcctccaaagagggggca
gctgtaggcgagcagctccccaatggcagtggcgggggcagcaggaagcgccccctagag
gagggcaacaatggccacacgctgtccaagttccgggccaagaagcgtaagaaaacaccg
ggcccggttctaccaaaaaatgcacttatgcagctgaatgaaatcaagccggggctacag
tataagctgctgtctcaaacaggtccggtccatgctcccgtgtttgtcatgactgttgag
gtcaacggtcaactgttcgagggctcaggtccgactaagaagaaggccaagctgaatgcg
gcagaaaaggccctgcgctcctttgtccagttccccaacgcctccgaggcgcacctggct
atgggccggacactgacagtcaacacggacttcacatccgatcaggccgacttcccagac
atgctcttcaatgggtttgagacgcccgcaccacccgaggactccttttatctgggatcc
aatggcagcagctccttaaactcgctgggagagtatcccctgccctccacgccaggtgct
aaccttgcccaggcaccgttgccccctccctcctccttcacctcaaactcgagcggaaag
aatcccgtcatgatcctcaacgagctgaggccgggcctcaagtacgactttgtgtcggag
agcggtgagagccacgccaagaactttgtcatgcaggtgtcggtggactcacagcagttt
gagggctctggacgaaacaagaagctggccaaggcccgggccgcccaggcagccctctca
gccctcttcaacatgcagctggaccagacaccctcccgacagcccatccccagagaggga
ctgcagctccacctaccccaggttctcgccgacgccgtctctcgcctggtggtggacaag
ttcagcgagctgacggacaacttcacctcgccccacgcgcgacggaaagtcctggcgggg
gttgtcatgacaacgggcacagacgtgaaagaggcccaagtgatctgcgtctccacgggc
accaagtgcatcaatggcgagtacatgagcgaccgcggcctggcactcaacgactgccac
gcagagattatcgcccgccgctcgctgatccggtacctctacgcccagctagagcacttc
ctaagcaacaacaaggaggagcagcagaagtctattttcatgcgctgtgacaagcgtggc
taccggctaaaggacaacgtccagttccacctctacatcagcacctcgccctgcggagac
gcacgcatcttctcgccgcatgaggccggcatggaagaccaaggagaccgccaccccaac
cggaaggcacggggccagctgaggaccaagatagagtctggggaggggaccatccctgtg
aggaccagcaacaccatccagacatgggacggggtgctgcagggagagaggctgctcacc
atgtcctgcagtgacaagatcgcaagatggaacgtgctgggcatccagggatctctgatg
agctacttcacggagcccatctacttctccagcatcatcctgggcagcctgtaccacgcc
gaccacctctcccgggctatgtaccagcgcatcgccgacatcgaggacctgccccaacag
ttcagcctcaacaggcctctactgagcggcatcagcaacgcagaggcgaggcagccgggc
aaggcgcccaacttcagcgtgaactgggcagtgggcgaccaggcgctggaggtcatcaac
gccaccacgggcaaagacgacatggggcgcgcctcgcgtctctgcaagcacgccctctac
agccgctttattcgcctgcactccaagttgtcatccacactgaggatcaaggtgtccaag
cccagctcgtaccacgacgccaaggaggcggctgtagagtaccacaacgccaagcagacg
ctgatcaaggtcttccacaagtcgggcctgggggcctgggtgaagaagcccatcgagcag
gaccagttctccctcaactcctga
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