Oncorhynchus nerka (sockeye salmon): 115135756
Help
Entry
115135756 CDS
T07952
Name
(RefSeq) teneurin-1-like
KO
K24473
teneurin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115135756
Domain-containing proteins not elsewhere classified [BR:
one04990
]
EGF-like domain-containing proteins
Other EGF-like domain-containing proteins
115135756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
TEN_NHL
EGF_TEN
Ten_N
EGF_Teneurin
GBD_Tenm3
Teneurin_ABD
TTR_TEN1-4
FN-plug_TEN1-4
Tox-GHH
EGF_2
RHS_repeat
NHL
EGF_Tenascin
I-EGF_1
CarboxypepD_reg
DUF4595
Motif
Other DBs
NCBI-GeneID:
115135756
NCBI-ProteinID:
XP_029526674
LinkDB
All DBs
Position
LG10:42214004..42397569
Genome browser
AA seq
2712 aa
AA seq
DB search
MEQMDCKPYQSLSKARNEMELAYTSSSDESEDGRNLCKSYTSRETLPDYGQEMRLNYNSH
RAKRKTVEEHTGDLDQLARPSYQAELRSAPQHGYPLGMGSDVETETEGGPSPDHALRLWM
QEIKSEHSSCLSSRANSVLSLTDTEQERKSDGENELPSSPPAQFTFRPLPPPPPPPHACT
CARPAPHAHVSEALQRNTLPARSQAMDGDPTQPADRDRDQLHNSWALNSNIPLETRHFLF
KHGSGSSALFSAASQNYPLTSNTVYSPPPRPLPRSTFSRPMFTFNKPYKCCNWKCTALSA
TAITVTLALLLTYVIAVHLFGLTWHLQPADGQLYENGLSKLDRDSESIDITFTPFGLPGL
NNTNKDKELFHRGKAIDRGEVDIGTQVMQVIPPGLFWRFHITIHHPEYVKFNVSLARDAL
LGIYGRRNIPPTHTQFDFVKLLDGKQLIKQEVQMVAEDSNASPRNLILSSLQETGFIEYM
DAGTWYLAFYNDGKKMEQVFVLSTAIETMDGCSTNCKGNGECVAGHCHCFSGFLGPDCSK
DSCPVLCSGNGDYEKGYCQCHPGWKGPECDIQEDQCIDPTCSNHGTCVNGICMCSPAYKG
NNCEQVDCLDPQCSGHGVCVKGECLCSTGWGGPDCESPLPACQEQCSGHGKYLPDSGSCT
CDSSWTGSDCSTEVCPVPCSAHSVCVGGKCQCEEGWDGPGCDLKDCHPRCKEHGQCKNGQ
CECHPGWEGEHCSIAHYLDLVVKDGCPGLCNGHGRCTLEQSGWHCVCQASWSGMGCNVVM
ETECDDNADNDGDGLTDCVDPDCCQQPSCHSGPLCQGSPDPLDLIQQNQTPYASLLSRLF
YDRVRFLVGKDSTHVFPGDIPFDSSRASVIRGQVVALDGTPLVGVNISFQQYPEFGFSVS
RQDGSFDLVAAGGISVSLIFQRAPFLMQKRTIWLPWNQFVVVEKVTMARVESRPPVCNLK
NLVSPYPIVLPSPLIRFARTCEERGPAIPELQAVQEEITIPGSFLKLSYLSTRSPGYKAL
FRIILTHSIIPTGLAKVHVSTAIEGRLFQKWFPAAPNLVYVLAWNKTDVYGQKVVGLAQA
LVSVGYEYESCADYIVWERRMAQLQGFEMIASNLGGWSLDKHHILNLQSGVLHKGNGENI
FISQQPPVIYTVMGTGYLRTIPCPNCNGPALGRKLYAPVAITCGSDGSIYVGDFNFIRRI
LPNGFVISVLELRNRDLRHSSSPAHKYYLAMDPVREALYLSDTSSRRVYRLRTLTEPKDL
AKNMEVVAGTGDQCTPFDQGHCGDGGKAIDASLNNPRGIAVDKQGFVYFVDGTMIRKING
KGMISTVIGSNGLMSTQPLSCDARMDISQVRLEWPTYLAVNPMDNSLYILDNNIVIQVSE
SSQVRIVAGRPIHCQVPGIDHYLVSKAAVHSTLEAAKAIAVSHQGTLYIAETDERKINRI
QEVTTNGEISVVAGAPTECDCKIDPNCDCFSGDGGYARDAKLKAPSSLAVSPNGTLYISD
LGNIRIRALSPNRPQLNQNSMYEITSVVDQELYLFSVNGTHLHTRSLVTGDYVYNFTYSG
EGDVSAVVSSDDTAVHVRRDANGVPLWLLVPGGQVYWLTISNGGVLKKVSALAHDLAQIS
YHGNSGLLATMSNEIAWTTVYQYNSDGHLINVTLPTGEVSSFYGNMEKSVRVEADTSNRE
KFITATNFSAASTIYTLRQEHAQNTYRVSSDGSLWVTFASGMEVTLNTEPHISAGVVNPT
VGKCNITLPGENAHSVIEWRQRRDQAKGNYTAYERRLRAHNRNVLSIDFNQATRVGKIYD
DHRKFTLRILYDQMGRPIVWSPSSKYNEVNVTYSPAGLVTSIQRGNWSEKLEYENGRVVS
RTWTNGKIWSYTFLEKSVMLLLHSQRRYTFEYDHTDYLMSVTMPSMVRHSLQSMLSVGYY
RNTYSPPDSSGASVIHDYSHDGRLLQTLYLGTGRRILYRYTRQSRLAEILYDTTLVTYTY
EETSGGVKTIHLMNQGFMCTIRYRQTGPLVGRQIYRFSVEGLVNARFDYSYNNFRVTSMQ
AMINETPLPIDLYRYVDVSGRIEQFGKFSVINYDLNQVITTHIMKHTKIFNANGQVIEVQ
YEILKSIAYWMTVQYDNMGRITICDIRIGVDNNITRYSYEYDADSQLQAVSVNDRPQWRY
SYDLNGNINLLSHGNSARLTPLRYDLRDRITRLGEIQYKMDEDGFLRLRGNVMFDYNSNG
LLAKAFDKVSERSVHYRYDGLGRRVASRTSDGQQLQYFYADLTKPTRVTHMYNHSSSEIT
SLYYDLQGHLIAMELSSGEEYYVACDNSGTPLAIFSSQGHIVKEMLYTPYGDIYQDSNPS
FLLIIGFQGGLYDALTKLVHLGRRDYDVVAGRWTTPNHNLWTELSINPKPFNLYSFKNNY
PVAELQDVTKFTTDISSWLQLFGFQLHNVVPGYPKPEVESMEQTYEMMKTQTKTQDWDPS
KVLLGIQCELQKHLKNFISLDRLPMSKMTGQLGAWHGRRPRFSAISSIFGKGVKFAIRDN
VVTTEIIGVASEDSRRVAAVLNHALYLSGLHFTVNGLDTHYFVKPGLLEGDLGVVGHNGA
GRVLENGVNVTVSQMTTVVDGRTRRFADIQMQHGTLCFNIRYGATEEEEREHVLEVARQR
AVEQAWVIEQRRLEEGEEGSRLWTEGERQQLLTTGRVPGYDGYFVLPVEQYLELSDSANN
IHFMRQSEIGRR
NT seq
8139 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatggattgtaagccttaccagtcgttgtccaaggcccggaatgagatggag
ctcgcctacaccagctcctcagacgaaagcgaggacggcaggaacctttgcaaatcctac
acatcccgagagaccctgcccgactacggccaggagatgagactaaactacaacagccac
agagccaagcggaaaacagtggaggaacacactggagacctggaccagctagcacggccc
agttaccaggcggaactgcgctctgccccccagcacggctacccgctgggcatgggctct
gatgtggaaacagagacggagggtgggccctcgcccgaccacgccctcagactgtggatg
caggagatcaaatcagagcacagctcctgtctgtccagcagagccaactctgtcctgtcg
ctcaccgacactgagcaggagaggaagtcagatggagagaacgagctccccagcagtcca
ccagctcaattcaccttcagacccctccccccacctccaccccctccccacgcgtgcaca
tgtgcccgcccagcccctcacgctcacgtttctgaggcactgcagaggaacaccctgccg
gctcggagccaggcgatggacggagatcccactcagccggccgacagagacagagaccag
ctccacaacagctgggccctcaacagcaacatccccctggagaccaggcatttcctgttc
aaacatggctcaggctcctctgccctgttcagcgctgccagtcagaactaccctctgaca
tctaacacagtgtactccccacccccacgacccctacccaggagcaccttctccagaccc
atgttcaccttcaacaagccctacaagtgctgcaactggaaatgcactgccttaagcgcc
accgctatcaccgtaaccctcgctcttttgctcacatacgtcattgcagtgcacttgttt
gggctgacctggcacctgcagccagcagatgggcagctctatgagaatggactcagcaaa
ctggacagagactcagagagcatagacataaccttcacgcccttcggtctgcccggcctc
aacaacaccaacaaagataaggagctattccacagggggaaagcgatagaccgaggggag
gtggacattggtacccaggtgatgcaggtcattcccccaggtctgttctggcgtttccac
atcaccatccaccacccagagtatgtcaagttcaacgtctccctggcacgggacgccctc
ttggggatctatgggcgtaggaacatcccccctacacacacacagtttgactttgtcaag
ctcctggatgggaagcagctgatcaaacaggaggttcagatggtagcggaggattccaac
gcgtctcccaggaacctgatcctctcctccctccaggagacgggcttcatagagtacatg
gacgctggaacctggtacctggctttctacaacgacggaaagaaaatggaacaagttttt
gttctgagcactgccatcgaaaccatggacggctgctccaccaactgtaaggggaacggt
gaatgtgtagcaggccactgccactgcttcagcggctttctgggaccagactgctcaaaa
gactcctgtcctgtcctgtgcagtgggaatggagattatgagaaaggttactgccagtgt
cacccgggctggaagggcccagagtgtgacatccaggaggaccagtgcatcgatcccacc
tgctccaaccacggcacctgtgtcaacggcatctgtatgtgcagccccgcctacaagggc
aacaactgtgaacaagtggactgcctggaccctcagtgttctggccatggtgtgtgtgtg
aagggggagtgcttgtgttcaacggggtggggaggcccagactgcgagagccccctgcca
gcatgccaggagcagtgttcaggccatgggaaataccttccagactctggcagctgtacc
tgtgattccagctggactggctctgactgctccaccgaggtgtgtccggtgccctgcagt
gcccacagtgtgtgtgtgggtgggaagtgccagtgtgaggagggctgggacgggccaggc
tgtgacctgaaggactgccatccccgctgcaaggagcacggccagtgtaagaacggacag
tgtgagtgccaccctggctgggagggagagcactgcagcatcgcgcattacctggatctc
gttgttaaagacggctgtccaggcctgtgcaatggccacggtcgatgcaccctggaacag
agcgggtggcactgtgtgtgccaggcgagctggagcggcatgggatgcaatgtcgtcatg
gagacagagtgtgatgacaacgccgacaacgatggagatggcctgacggactgtgtggac
ccagactgctgccagcagcctagctgtcacagtgggcctctgtgccagggctccccagac
cccctggacctgatccagcagaaccagaccccctacgcctcgctcctctcacgcctcttc
tacgaccgcgtacgcttcctggttggaaaggacagcacccatgtcttccctggagacatc
ccattcgacagcagccgagcctcagtgatccgggggcaggtggtggcactagacgggacc
ccattggtgggagtgaacatcagcttccagcagtaccctgaatttggcttctctgtcagt
cgccaggatggcagttttgacctggtggctgcagggggcatctcagtctctctgatcttc
cagagggctcccttcctcatgcagaaacgcaccatctggttaccgtggaaccagtttgtg
gttgtagagaaggtcaccatggcgagggttgagtctcgcccccctgtgtgtaacctgaag
aacctggtcagtccgtaccccatcgtcctcccctcccctctcatccgctttgccagaacc
tgtgaggagcgaggcccagccatccctgagctgcaggctgtccaagaggagatcaccatc
cctggcagtttcttaaagctcagctacctgagcacccgctcccctggctacaaggctctg
ttccgcatcatcttaacccactccatcatccccaccggcctggctaaggtgcatgtgtcc
accgccatcgagggacgactctttcagaagtggttccctgccgccccaaacctggtctac
gtcctggcctggaacaagactgatgtctatgggcagaaagtggtgggcctggcccaagct
ctggtctctgtaggctatgagtatgagtcatgtgctgactacattgtgtgggagagaagg
atggctcagctgcagggctttgagatgattgcctccaacctggggggatggtccctggac
aagcaccacatccttaacctacaaagtggtgttctacacaaagggaatggagagaacatc
ttcatctcccagcaaccgccagtcatttacacagtgatggggacggggtacttgcgcaca
atcccctgccccaactgtaacggccctgccctgggtagaaagctctacgctcctgtcgct
atcacctgtggctctgacggcagcatctatgttggcgacttcaacttcatcagaaggatt
cttcccaatggattcgtcatcagcgttttagaattgaggaatcgagatctcaggcacagc
tccagcccagcccataagtactacttggccatggacccagtaagggaggccctctacttg
tctgacaccagcagcaggagggtctacagactcaggaccctcacagagcccaaggacctg
gccaaaaacatggaggtggtggcagggacgggggaccagtgcacccccttcgaccagggc
cactgtggagacgggggcaaagccatcgatgcctccctcaacaaccccagagggattgca
gtggacaagcaaggatttgtctactttgttgatggaaccatgattcgcaagatcaatggg
aaaggaatgatatcaactgtcattggttccaacggcttgatgtccactcaaccgttaagc
tgtgacgcccgcatggatatttcacaggttcgtctagaatggcccacctacctggctgtc
aaccccatggacaactccctatacatcttggacaacaacatagtgatccaggtgtcagag
agcagccaggtgaggatcgtggcgggacggcccatccactgccaggtccctgggatcgac
cactacctggtcagcaaggcagctgtccactccaccctggaggcagccaaagccatcgca
gtttcccaccagggcactctctacatcgctgagacggacgagaggaagatcaaccgcatc
caggaggtcaccaccaacggggagatctctgtggtggccggggcgcccactgagtgtgac
tgcaagatcgaccccaactgtgactgcttctctggcgatggtggatatgcccgtgatgcc
aagctaaaggctccctcgtccctggctgtttcccctaacgggactctgtacatctcagac
ctggggaacatccgtatcagggccctgtcccccaacaggccccagctcaaccagaacagc
atgtatgagatcacctctgtggtggaccaggagctctatctgttcagcgtgaacggcacc
cacctccacacccgcagcctggtcaccggagactacgtctataacttcacctactcagga
gagggcgacgtgagcgccgtggtctccagcgacgacaccgcggtccacgtgcgccgtgat
gccaatggcgtgcccctctggctgctggtgcccgggggtcaggtctattggctcactatc
agcaatgggggtgtcctcaagaaggtctccgccctggcgcatgacctagcgcagatcagc
taccatggcaactcaggtctcctggcaaccatgagcaatgagattgcctggacaacggtc
tatcagtataattctgatggtcatctcatcaatgtcaccttgccaacgggagaggtcagc
agtttctacggcaatatggagaaatcagtgcgggtggaagcagacacttcaaatcgggag
aaattcatcacagccacaaacttctctgctgccagcactatctatacattacgccaagag
catgctcaaaacacgtaccgtgtgagttcggacggctctctgtgggtgacgttcgccagc
ggcatggaggtgaccctgaacacagaaccccacatctcggcgggcgtggtcaaccccacg
gtgggcaagtgtaacatcacccttccgggcgagaatgctcacagtgtcatcgagtggagg
cagcgaagagaccaggcgaaagggaactacacagcctacgaacgcaggctcagggctcac
aacagaaacgtgctgtccatagactttaaccaagccacacgagtaggcaagatctatgac
gaccaccgcaagttcaccctgcggatcctctatgaccagatgggtcgtcccatcgtctgg
tctcccagcagcaagtacaatgaggtgaatgtgacctattctccagcgggcctggttacc
agcatccagaggggcaactggtcagagaaactggagtatgagaatgggagggtggtctcc
aggacatggaccaatgggaagatatggagctacacttttctggagaagtcggtcatgctg
ctgttgcacagccagcggcggtacacctttgagtatgaccacacggactacctgatgtct
gtgaccatgcccagtatggtgcgtcacagcctgcagtctatgctgtcagtgggctactac
aggaacacctacagcccaccagacagcagcggagcctctgtgatccacgactacagccat
gatggccgtctgctccagactctgtacctgggcactggccgccgtatcctctaccgctac
acccgccagtcccgcctggcagagatcctgtacgacaccaccctggtcacctacacctac
gaggagacctccgggggggtgaagaccatccacctcatgaaccagggcttcatgtgcacc
atccgctacagacagacaggtcctctggttgggagacagatctacaggtttagtgtggag
ggcctggtgaatgccagatttgactacagctataataacttccgggtcaccagcatgcag
gccatgattaatgaaacccctcttcccattgacctttaccgttatgttgatgtgtcagga
agaattgaacagtttgggaaattcagtgtcataaactatgacctcaatcaagtgatcact
acacacatcatgaagcacactaagatatttaatgccaacggacaagtgatcgaggtccag
tatgagatcctgaagtctattgcctactggatgacagtgcagtatgacaacatgggccgc
atcactatctgtgacatcagaattggtgtggataacaacatcacacgctactcatacgag
tatgatgctgatagtcagctccaggctgtgtcggtgaatgataggccacagtggcgctat
agttacgacctcaacggcaacattaatttactgagtcatggcaacagtgccagactaacg
ccgctgcgctacgacttacgagaccgcataacacggctcggagaaattcagtacaaaatg
gatgaagatggctttcttcgcctgcggggcaatgtcatgtttgattacaactccaacggg
ctgcttgccaaagcgtttgacaaagtgtcagagaggagtgttcactaccgctacgacggc
ctgggcaggcgggtggccagtaggaccagtgacggccagcagctgcagtacttctatgcc
gacctgaccaaacccaccagggtgacccacatgtacaaccactccagctctgagatcacc
tcgctctattacgacctgcagggacacctcatcgccatggagctgagcagtggggaggag
tactacgtagcctgtgataactctggcacaccactggccatcttcagcagccaaggacac
atagtcaaggagatgctctacaccccttacggagacatctaccaagactcaaacccttcc
tttctgctgatcatcgggttccagggcggtctctatgatgcgctgaccaagctggtccac
ctggggaggagggactatgatgtggtggctgggaggtggaccactcccaaccataacctg
tggacggagctcagtatcaaccccaagcctttcaacctctactccttcaaaaacaactac
cctgttgcagagttacaggatgtcaccaagttcactacagacatcagcagttggttgcaa
ctgtttgggttccagctccacaacgttgtccctggttaccccaagccggaggtggagagc
atggagcaaacctacgaaatgatgaagactcaaaccaagacacaagactgggaccctagc
aaggttctgttgggtatccagtgtgagctgcagaaacacctgaagaacttcatctctctg
gaccgactgcctatgagtaagatgactggtcagctgggggcgtggcatggccggaggccc
cgcttctctgccatctcctccatctttggaaagggtgtcaagttcgccatcagagataat
gttgtcaccaccgaaatcattggggttgcaagcgaggacagccggcgtgtggcagcagtc
ctaaaccacgcactctacctatccggcctgcacttcacggtaaacggtctggacactcac
tactttgtcaagcctggcctgctggagggggacctgggagtggttggccacaatggagcg
ggtcgcgtcctggagaacggcgtcaacgtgaccgtgtcccagatgacgacggtggtggat
gggaggactaggcgcttcgctgacatccagatgcagcacgggactctgtgcttcaacatc
cgctacggggccacagaggaagaggagagggagcatgtgctggaggtggcccggcagagg
gcggtggagcaggcctgggtcatcgagcagaggaggctggaggaaggagaggagggctcc
aggctctggacagaaggagagaggcagcagttgctcaccactggacgggttcccggctat
gacggctacttcgtgctccccgtggagcagtacctggagctctctgacagtgccaacaac
attcacttcatgaggcaaagtgaaatagggaggaggtaa
DBGET
integrated database retrieval system