Oncorhynchus nerka (sockeye salmon): 115135765
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Entry
115135765 CDS
T07952
Name
(RefSeq) nuclear pore glycoprotein p62-like isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115135765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115135765
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115135765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
115135765
NCBI-ProteinID:
XP_029526688
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Position
LG10:complement(42579184..42585515)
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AA seq
536 aa
AA seq
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MSGGFNFGAPKTTAAPATGFGIASAAPTTSGGGFSFGPPNPAQPPNSTNSTGGFSFGNPT
QNSTPAGGGFSIGTPTAKLNLGTPASQPALTGITMGMATPTSGAGFGLGGGFATQTTAVP
TGGGFSFGTAGGLGAPVAQTPAQPAAAAGGLSLGTPAATTQMMGGGFSFGAAKVQAAPTV
TAGGGFSFGNSAPATLSLGNQSTGLNSVAPASTAAPTTTQGGGFAFGVKPSATPAPAVTA
SATQASLGSSLFAVPASTAAVTGFLGAAPTSAAPAATSAAGSTLGFMLKPLGAVTATTTA
SAGTGFSLGMKPAGATGIGSTVPITGIATTITTVTASAPPVMSYTQLEGLINKWSLELED
QERHFLQQATQVNAWDRTLVENGEKITSLHREMEKVKLDQRRLDQELDFILSQQKELEDL
LSPLEESVKEQSGTIYMQNADEERERTYKLAENVDAQLKRMSQDLKEIIEHLNTSCGPAD
TSDPLQQICKILNAHMDSLQWIDQNSVLLQRRVEDVSKLCDNRRKEQEKTLRITFG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggattcaactttggagctcccaaaaccacagctgcgccagccacaggcttt
gggattgcaagtgctgcacctacaacttcaggtggtggcttctcttttggaccccccaat
cctgcccagcccccaaacagtacaaactcaactggaggattcagctttgggaaccctaca
cagaacagtactccagcaggtggaggcttctctattgggactcccactgctaaactcaat
ctgggcacacctgcctctcaaccagcactgacagggataactatggggatggcaaccccc
acctctggggcaggctttggacttggtgggggtttcgccacacaaaccactgctgttccc
acaggaggggggttcagctttgggaccgcaggggggcttggagcccctgttgcccaaacc
ccggctcaaccagcagcagcagctggtgggctctctttaggaactcctgctgcaaccact
caaatgatgggaggtgggtttagttttggtgccgccaaggtccaggcagcccctaccgtg
accgcaggagggggcttctcatttgggaacagcgcccctgccaccctctccctggggaac
cagtccacaggtctgaactctgtggccccggcctcaacagctgcaccaaccacaacccag
ggtggaggatttgcttttggtgtcaaaccttcagctactccagcccctgctgtaactgcc
tcggctacccaggcctcattaggttcttctctctttgcagtaccagcatcaacggcagca
gtcacaggttttctgggtgctgcccccacctcagctgccccggctgccacatcggcagca
ggaagtaccctgggcttcatgctcaaacccctgggagcagtcactgccaccaccacagca
tcagctggcacaggtttttcactgggtatgaaacctgcgggtgccactggcatcggctca
acggtcccaatcactggaatagccacaaccatcactactgttacagcaagtgctcctcca
gtgatgtcctacacccaactagagggtctcatcaacaagtggagtcttgagctggaggac
caggagaggcacttcttgcagcaggctacccaggtcaacgcctgggaccgcacgctggtg
gagaatggagagaagatcacatcactgcacagggagatggagaaggtgaaactggaccaa
agaaggctggaccaggagctggacttcatcctgtcacaacagaaggaactggaggacctg
ctgtccccactggaggagtctgtcaaagaacagagtggaaccatctacatgcagaatgcc
gatgaggaacgcgagagaacgtacaagcttgcagagaacgtggacgcccaactgaagagg
atgtcccaagatctaaaggaaataattgaacacctgaacacatcctgtgggccagctgat
accagtgacccgcttcagcagatctgtaaaatcctcaatgcccacatggactctcttcaa
tggattgaccagaactcggtgcttctacagagaagggtggaggatgtgtccaaactctgc
gacaaccgacgcaaagagcaggagaagactcttcgcataacatttggttaa
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