Oncorhynchus nerka (sockeye salmon): 115135776
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Entry
115135776 CDS
T07952
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
one04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115135776
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115135776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115135776
04090 CD molecules [BR:
one04090
]
115135776
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Nectin family
115135776
CD molecules [BR:
one04090
]
Proteins
115135776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
Ig_2
I-set
DUF6022
Keratin_assoc
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
115135776
NCBI-ProteinID:
XP_029526710
LinkDB
All DBs
Position
LG10:complement(42838258..42913816)
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AA seq
566 aa
AA seq
DB search
MEDGSTFKMFLPCLRNYPLYKGQHAVFMVLLYILTGVGCSQVLVPQKVSAVLGKNVTLGC
SVEVGANLSLTQSSWERRLPTGSVTVAVYNPVFGISIPPNYVRRLSFRSPSSHDATIVLE
DVGFEDIGVYTCKVATFPLGNTQASTTVSVLVEPRVYVSAGSVALIDEGNETVVATCIAE
RARPPAEVSWETDLFGQSEVSLQDEANGTTSTQVRYLWQPTRHIQGHALTCVVRHPALHT
DFRIPYQLNVQYAPDIVVVGYDGDWYVGRENIQLTCKANANPPAHHFTWIRLDGKMPEGV
EIVNNTLLFLRPLQWNDSGVYRCEVANDINLRSRDLRIRIQDPPTTSMPSTTPAPVLTGS
ASSSTSVGDKRRVFTSPTLAALPPDNHLGTIVGGAVGGALFLLLLLVVGGVCYLRQRQTF
RGDYYTKQYLGPSDMQKAPPQHKLHPTKPENNVYLDKDREEWGDRERNHVRDRERLHLHP
TSTTIINNQREPECQPNGLTRAMRNGDHLRSYPSPHQTGHARYAAPSHPLSTGSPYLSDD
CYDSGAEGDYVSHMDGSVISRREWYV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggctctactttcaaaatgttcctgccttgcctaaggaattacccgctttac
aaaggacagcatgctgtatttatggttcttctgtacatcttgacaggtgtggggtgcagt
caggtgttggttccccagaaggtgagtgctgtattggggaagaatgtgacgttgggctgt
agcgtggaggtgggggccaacctcagtcttacccagagttcctgggagcgccggctcccc
acaggctcggtgactgtggcggtgtacaatcccgtgttcggcatctcgatccccccaaac
tatgtgcgccgcctgtccttccgctcgccctcctcccatgacgccaccatcgtactggag
gacgtgggctttgaggacattggagtgtacacctgcaaggtggccaccttccccctgggc
aacacacaggcctccaccactgtcagcgtgctcgtggagcccagggtgtatgtgtcggct
ggctcggtagctctgatcgacgagggcaatgaaacagtggtggccacctgcatcgctgag
cgggcccggccccccgccgaagtctcctgggagactgacctgtttggccaatcagaggtg
tcgctgcaggacgaggcaaacggcacgaccagcacccaggtgcgctacctgtggcagccc
acccgccacatccagggtcacgccctcacctgtgtggtgcgtcatcctgccctgcacaca
gacttcaggatcccctaccagctcaacgtgcagtacgccccagacatcgtggttgtaggt
tatgacggtgactggtatgtgggccgtgagaacatccaactgacctgcaaagccaacgca
aacccaccagcacaccacttcacatggatcagactggacgggaaaatgccagaaggggtg
gagatagtgaacaacaccttgctgtttctgaggcccctccaatggaatgactctggagtc
tacaggtgtgaggttgccaatgacatcaacctacgcagcagggacctgaggatacgcata
caagatcctcccaccacctccatgccctccaccacccctgcgcctgtcctaaccggctct
gcctcctcatccacctctgtgggagacaagcgacgggtcttcacctcccccaccctggca
gccctgccccccgacaaccacctgggcaccattgtgggcggggctgtgggcggagccttg
ttcctccttctgctgctggtagtgggcggggtctgttacctacgacaacgacagaccttc
cgcggggactactacactaagcagtacctagggccttcagacatgcagaaggctcctcca
cagcacaagctccaccctactaagcctgaaaataacgtctacctagacaaggaccgcgaa
gagtggggcgaccgcgaacgcaaccacgtgcgggaccgtgaacgcctccacctgcatcca
acatcaacaaccatcataaacaaccaaagagaaccggagtgccagcccaacggcctcacg
agggcgatgagaaacggagaccacctgcgtagctaccccagcccacaccagacaggccat
gctagatatgctgccccatcacacccactgagcactggctccccctacctgtcggatgac
tgctatgacagcggggctgagggggactatgtctcccatatggacggctcagtgatctca
cgcagggagtggtacgtctga
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