Oncorhynchus nerka (sockeye salmon): 115135788
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Entry
115135788 CDS
T07952
Name
(RefSeq) rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115135788
09142 Cell motility
04810 Regulation of actin cytoskeleton
115135788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115135788
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115135788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
FF_RHG35_4th
RhoGAP-FF1
Ras
GTP_EFTU
FF
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
115135788
NCBI-ProteinID:
XP_029526729
LinkDB
All DBs
Position
LG10:complement(43183827..43210683)
Genome browser
AA seq
1530 aa
AA seq
DB search
MIMMAKKQDVKSPTYNLIVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLS
TSDFGGRVVNNDHFLFWGEVGRVVEEGPECRMHVVEQTEFIDDQTFQPHRSTAMQPYIKR
AASTKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKLQADGFVLCMDVSRGMNRNFDDQLK
FVTNLYGHLSKTKKPIVLVLTKCDEGVERYIKDSHTFAITKKSLPVVETSARSNINVDLA
FLTLVQLIDKSRGKPKIIPYFEALKLQSQQIALAKDRYEWLVNRIVKNHNETWLNTSRRM
HTSSEFNEYVFLEGTAKCKKLFQQLVYRLKQEHIERRRKIYLSTLPLALSSLVPDLDEID
QLSWSGVQKVLESKQHFAHWFVVLEDSPWEDTSHIDNMEDERIPSDLLETLPAEDIFDAH
LEHLRNECKRAEMRQEFKHKLACSPFVTPGKPWEEARSFIMNEDFYQWLEESEYLDLYNR
HQKEIIGHAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKALQKLPAE
RDALVLKHIHFVYHPTKETCPSSPQCGDFRIEQLLASRFPTCYPFFNVKSYFGDIKADRI
NLVILGKDGLAREFANEIRALCTNDDRYVLDGKMYELTLRPIEGNVRLPVNSFHTPTFTP
HGCLCLYNSKESLTYVVESIERLRESTIGRRDSHIAQLLTSLLLVTKRGVGTYADIGGET
ALGLITQGQQVARRLQCSFLDPASPGVGYGHNVNESQINQVLRGLLDSRRSSSFSSSSPP
LPPQTPGPRDSPHQPSPEADIRIVMCLMCGDNYDVEQLLSPFLLPQHCRPTSNSGTSVIL
EQTVGPHKQVIELSLLSYHASFSLRKSRLVHGYIAVYSARRKASLETLCAFLCEVQDIIP
VQLLAVGESQVELTESESAREQLVQGEELAQEIEGRFNSVVCGSGGVVGGLHRMEMFHPF
LMEVVEKRNIVEATHMYDNVAEACINETAYSPRCSSPSTGTMFLDSDMDDVEPSPPYYDG
TLTSHGGSLNLPDLDSSDVSVISDISSFENKLNSKAPPQVRPKPSVTFDFRKVGRNPYNT
DTMGHRRSLPSAVTWVPGGDGGYDPSDYAEPMDAVSKPRPSNEEIIYSVPHDSTQGKIIT
IRNANRMHANGNGSDSEADSSSLERRRKFTAAGVKPRLYRDRSKRLGKFSSFRTSFIGSE
DEMGALPKTKEDDFGTLKGDIINEEGEDPKKRNILKSLRRTAKKTRPKPRSSIPKPLESS
YFGVPLVNVVSPDRPIPLFIDKCVRFIETTGLNTEGLYRVSGNKCEMESMQRQFDQDHGL
DLVEKDFAINTVAGALKAFFSELPEPLVPCILQVELLEAFKINDREQRLYTMKDVLRRFP
RENYDVFRFVMSHLHKVSQLSRQNLMTSENLSICFWPTLMRPDFTTMDALTATRTYQTII
ETFIHQCAFFFYNQPLLDSPTGLAGLRASPTTTLTGGSAYSCYHSSPPSTATHFSSLQQS
PPTTPQSPLQSLLTPLHQHPHHTPTEQETL
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgataatgatggcgaaaaagcaagatgttaagtcacccacatacaaccttattgtggtg
ggtttgtcaggaactgagaaagagaagggccagtgtggcgtgggtaagtcctgtctgtgc
aaccgctttgtgcgccccagtgccgatgacttctatctggaccacacgtcagtgctgagc
accagtgactttgggggtagagtggttaacaatgaccatttcctgttctggggggaggtg
gggcgggtggtggaggaggggccggagtgcaggatgcatgtggtggagcagacagagttc
attgatgaccagacgttccagccacaccgcagcactgccatgcagccctacatcaagagg
gcggcctccaccaagctggcctctgcagagaagctgatgtacttctgcacggaccagctg
gggctggagcaggactttgagcagaagcagatgcccgagggcaagttacaggctgatggg
ttcgtgctctgtatggacgtcagtagggggatgaaccgcaactttgacgaccagttgaag
tttgtcacaaacctttacggtcatctgagcaaaacaaagaagcccattgtgctggtctta
accaagtgtgatgagggggttgaacgctacatcaaagattctcacacctttgccatcact
aaaaagagtcttccagtagtggagacatctgcacgctctaacatcaatgttgacctagcc
ttccttactttggtgcaactcattgataagagcaggggcaagcccaagatcattccttac
tttgaggccctcaagcttcagagtcagcagatagccttggctaaagaccgatacgaatgg
ctagtcaaccgcatagtgaagaaccacaacgagacctggcttaacaccagcagacgcatg
cacacctcttcagagttcaatgaatacgtctttctggagggtacagcaaaatgcaagaag
ctcttccagcagcttgtgtaccgtctgaaacaggagcacattgagagacgtcggaaaatc
tatctgagcactcttcctctagcacttagctccctggtgcctgacctggatgagatcgac
cagctgagctggtctggggttcagaaggtcctggagtccaagcagcactttgcccactgg
tttgtagttctggaggactctccatgggaggacacgtctcacatagacaacatggaggat
gagcgcatcccctcagacctgctagaaacgttaccagccgaggacattttcgacgcccac
ctggagcacctgaggaatgagtgcaagcgggctgagatgaggcaggagttcaagcacaag
ttggcctgttctccctttgtcacgcctggcaagccttgggaagaggcccgcagcttcatc
atgaatgaagacttctaccaatggttggaggaatcagagtacctggacctctacaaccgc
caccagaaagagatcatcggccacgctaaagaggacttccaggagcttctgctggagtat
tcagagctcttctatgagctggaggtagacgcaaagcccagcaaggagaagatgggggcc
atccaggaggttttaggggaggagcagcggtttaaagccctgcagaagcttccagctgag
agagatgctctggtattgaagcatattcactttgtctaccaccccaccaaggagacctgt
cccagcagcccacagtgtggagacttcaggatagagcagctcctggcctcacgcttccca
acatgctacccattcttcaacgtgaagtcttattttggggatattaaagcggaccgcatc
aaccttgtgatattgggcaaagacggactggctagggagtttgccaatgagatcagagct
ctctgtaccaatgacgaccggtatgtgttggatgggaagatgtatgagctcaccctgcga
cctatcgagggcaatgtacgacttcctgttaactccttccacactcccaccttcacaccc
catgggtgcctgtgtctgtacaactcaaaagagtccctaacctacgtcgtagaaagcatt
gaaaggttgcgggagtcaacaatcggtagaagggacagccatatagctcagcttttaaca
tctctgctcttggttactaaaaggggtgtagggacctatgcagatattgggggagaaact
gctttaggtctgataacacagggacagcaggtagcaaggagattgcagtgtagcttcctc
gacccagcctcacctggtgtgggctatgggcacaatgtgaatgagagtcagatcaaccaa
gtattgagaggtcttctggactctagaaggagctcatctttcagtagcagctccccacct
ctgccccctcaaactccaggtcccagagactctcctcaccagcccagcccagaggcagac
atccgcatcgtcatgtgcttgatgtgtggagacaactatgacgtggaacagctcctctct
cccttcctactgcctcagcactgcaggccaacatccaacagtggcacctcggtgatactg
gagcagacagtgggacctcacaaacaggtgattgagctctctctcctttcctaccacgcc
tccttctccctgaggaagagcagattagtgcatggctacatcgctgtgtactcagcccgc
cgcaaggcctctctggagaccctgtgtgccttcctatgtgaggtccaggacatcattcct
gttcagctgctggctgtgggggagagccaggtggagctcacagaaagtgagtctgccaga
gagcagctggtccagggagaggagctggcccaagagatagagggcaggttcaacagtgtg
gtgtgtggatcaggaggggtggtgggtggcctgcacaggatggagatgtttcatcccttc
ctgatggaggtggtggagaaacgcaacatcgtggaggccactcacatgtatgataacgtg
gctgaggcctgcattaacgagactgcctactcccctcgctgtagctcacccagcactggc
actatgttcctagactctgacatggatgacgtggagccctccccaccttactacgacggc
acactcacctcccatggtgggagcctcaacctgcctgacctggactccagcgatgtctct
gtcatctctgacatcagctcctttgagaacaagctcaatagcaaagccccgccccaggtg
agacccaagccctctgtgacctttgacttccggaaggtgggcagaaacccctacaacaca
gacaccatgggtcaccgtcgctccctgccctccgctgtgacatgggtgccaggtggggac
ggaggttacgacccctcggactatgcagagcccatggatgctgtgtccaagccccggccc
agcaacgaggagatcatctactctgtgccccatgacagcacgcagggcaagattattacc
atccgcaatgccaatcggatgcacgccaacgggaacggctcagacagtgaggcggacagc
agctccctggagcgccgcaggaagttcacggcggcgggggtaaagccacggctctaccgc
gaccgctctaaacgcctgggcaagttcagcagcttccgcaccagcttcattggcagcgaa
gacgagatgggggctctgccaaaaaccaaggaggatgatttcggaaccctgaaaggagac
atcatcaatgaggagggagaggaccccaagaagaggaacattctgaagagcctgcggcga
actgccaagaaaaccagaccaaagcctcggtcctctattcccaagcccctggagagcagc
tacttcggggtgcccctggtcaacgtggtgtccccagacagacctatcccactcttcatt
gacaagtgtgtccgctttattgagaccacaggtctcaacacagaggggctctacagggtg
agcgggaacaagtgtgagatggagagtatgcagaggcagtttgaccaggaccatgggctg
gacctggtggagaaggactttgccatcaacacggtggctggggctctgaaggcctttttc
tctgagctgccagagcccctggtgccctgcatcctgcaggtggagctgcttgaggccttc
aagatcaacgacagggaacagaggctgtacaccatgaaggatgtactgaggaggttcccc
agggagaactatgacgtcttcagatttgtcatgagccacttacacaaggtgagccagctg
agcagacagaacctgatgaccagtgagaatctgtccatctgtttctggcccactctgatg
cggccagacttcaccaccatggacgccctgacggccacgcggacctaccagacaatcatc
gagaccttcatccaccagtgtgctttcttcttctacaaccagcccctcctggactccccc
actggcctggctggcctccgtgcctcccccaccaccaccctcaccgggggctctgcctat
tcctgctaccactcctcccctccctccaccgccacgcacttcagctccctgcagcagtcg
ccccccaccaccccccagtctcccctgcagtccctcctgacccccctccaccaacacccc
caccatacccccaccgagcaagagacactgtga
DBGET
integrated database retrieval system
