Oncorhynchus nerka (sockeye salmon): 115135802
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Entry
115135802 CDS
T07952
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115135802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115135802
Membrane trafficking [BR:
one04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
115135802
Endosome - Golgi transport
Arf GTPase associated proteins
115135802
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115135802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
PH_3
PH_6
PH_8
RA
PH_13
RNR_Alpha
Ras_bdg_2
Motif
Other DBs
NCBI-GeneID:
115135802
NCBI-ProteinID:
XP_029526750
LinkDB
All DBs
Position
LG10:complement(43434611..43446758)
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AA seq
1125 aa
AA seq
DB search
MADNEDALRAMQNCFHSQFSVDEAEYEDIEENRRTSVDEDSIYLGCTLSQSFIPDFHHSP
VIKMGWLHKTPPQGTLVFQKRWVMLDAQYLRYFQNEKEVYSKRIIAILSVTKVLNVGGQK
FEVVTRNRTFLFRAENNTVREEWVSVLKETIQQHCNSMEKSLMNFSDTCGQRASRVPLIS
KQGYLEMSGLRSKLYVVICADSVFLYRNAEEHSQGVGITSIEMNLGTVKGTDKRSFNLTT
IYRTFSFVAESEQQREQWVEALQACVSHSLSSNAVAQKIWSEEANQRCADCGAPHPDWAS
VNLCVVLCKCCAGVHRGLGQSVSKVRSLKMDENAWTENQLFLLLGNDKVNLFWAANIPPS
EMLCPSSDSEERQRFVTAKYCQGKYRCYHALFGQQEALNKALCNTIQTGDVLETLSLVFC
GADVNCYTGDPELPSPVSVAQHYGQTLQVEFLTHNHNTELPGSRAGDHTILEAAHPISHT
GYLFKTASSTRAITERKSKGDFSRRWCSLNQGNFSYYESEKSSSQSGQMKMSDVLCLVVN
PQGKHGYGHSFELYHDSGRVYLFGEDSPDTVREWIKVIVKALVPPVAEDLVGWSFERVGR
LRYTVGQSFHCPCLGWFSLGGSRLLLLLHGEDQVDNIDLRKLQELSVEQEAAAVVLVDRG
RRLRLEGDRRPDYQGWLSGIQQGLGRGDGPLDQQQLTETEVPVIVDRCISYITQHGLKSE
GIYRRCGVNSKIAALLLSLRHDARQVRLSEGVCQVDNVANVLKRFLREVGEGVFNGHQAS
LPWLHTTTVSERRERVSQYKALLHSLPPVNRATLGAVINHLYCVQCFADENQMNMHNLAI
VFGPTLFQTDGTDNSAGQVVEELIQNYQDIFNVNAEQLQRQLDMISHVIKAQEDHAEEGT
PSPLTICGIYLERKEEGSELLVQISQAVSAEELVCEVLRRGNIPPQQGDYWSCFLVNDNQ
EMERPLHYQERALAIYFSLGKDCHLVVKRNCYMEAMLIYIAAMVDVSRNSMIKFSDEKGQ
RGKRTFSRRLCVLDGTSLRLYKEVKSTQPERECQVHALKVYYGIKKRLQPPSCWGMTVVC
EQAEQDKQQWYLCCESKNELIKWLATFMNLQHNSDLCPAASRPDS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatgaggatgcattgcgggccatgcagaactgtttccacagtcagtttagt
gtggatgaggctgagtacgaggacattgaggaaaacaggagaacatctgttgatgaagac
agtatctatcttggctgcacactgtcacaatccttcatccctgattttcaccactcacct
gttatcaagatgggctggctgcacaagactccgcctcaggggacccttgttttccagaag
cgttgggtgatgttggatgcacagtaccttcgatactttcaaaatgagaaggaggtctac
tcaaagcggatcatagccatactgtctgtcactaaagtgcttaatgttggaggacagaag
tttgaggtggtgacaaggaacaggactttcttgttccgtgctgagaacaacaccgtcagg
gaggaatgggtgtcagtactgaaagagactattcagcagcattgtaacagcatggagaag
tcccttatgaacttcagtgatacgtgtggacagcgtgctagtagagtcccgctcattagt
aagcaaggatacctggagatgagtggactgcgctccaagctctatgtagtcatctgtgcc
gacagtgttttcctctataggaacgctgaggagcacagccagggtgttggcatcacctcc
attgagatgaatttgggtactgtgaagggcacagacaaacggtccttcaacctcaccacc
atctacaggacattcagttttgtggccgagtcggagcagcagagggagcagtgggttgag
gccctgcaggcctgtgtcagtcactctctgtccagcaacgcggtggcccagaagatctgg
tctgaggaggccaaccagcgctgtgcagattgtggcgccccccacccagactgggcctct
gtcaacctgtgtgtggtcctctgcaaatgctgtgcaggggtgcacaggggcctgggccag
agtgtgtccaaagtccgcagtctgaagatggatgaaaatgcgtggactgaaaatcagctg
ttcctgttgctaggtaacgacaaagtaaaccttttctgggcagctaacattccaccaagt
gagatgctctgtccatcaagtgacagtgaggagcgccagcgctttgttactgccaagtac
tgccaggggaaataccgctgctaccatgcactgtttggccaacaggaagccctcaacaaa
gctctgtgcaacaccattcagacaggtgatgtattggagactctgtcgctggtgttctgt
ggagcagatgtgaactgttatacaggtgatccagagctgcccagccctgtgtccgtggcc
cagcactatggacagacacttcaggtggagttcctcactcacaaccacaacacagagctc
ccagggtcaagggctggagatcacacaatcttagaggctgctcaccccatctcacacact
gggtatctgttcaagactgcctcctcaacacgagccattacagagcgcaaatctaaagga
gattttagtcgtcgctggtgctctttgaaccaaggtaacttcagctactatgagagtgag
aagagctccagccagagtggacagatgaagatgagtgatgtcctttgtctggtggtcaat
ccccaagggaaacatggttatggtcattcctttgagctgtaccatgactctgggagagtc
tacctgtttggagaggattcccctgacactgtgagggagtggatcaaggtcattgtcaag
gccctggtcccccctgtagcagaggacctggtgggctggtcctttgagcgggtgggccgg
ctgcgctacactgtgggccagagcttccattgtccttgcctgggctggttctccctgggg
ggctccagactgctcctcctcctccacggagaagaccaagtggataacatcgacctgcga
aaactacaggagctctccgtggagcaagaagctgctgctgtggtgctggtggacagaggc
aggaggctgcgtttggagggggacagaaggcctgactaccagggctggctgagtggcatc
cagcagggcttagggagaggagacggccccctggaccagcagcagcttactgagacagaa
gtccctgtcattgtggaccgctgcattagctacatcacacaacatggtttgaagtcagag
ggcatctatcggaggtgtggtgtgaactctaagatcgccgccctgctgctctctctccgc
catgacgcccgtcaggttcgtctgagtgaaggggtgtgccaggtggataatgtggccaac
gtcctgaagagattcctcagggaagtgggagagggggttttcaatggccatcaggcctct
ctgccatggctccataccactactgtcagtgagagaagagagagagtgtcccagtacaag
gccctcctccacagcctccccccagtcaacagagccactctgggggctgtcatcaaccac
ctctactgcgttcagtgctttgcagatgagaatcagatgaacatgcacaacctggccatt
gtgtttggtcccacgctcttccagacggacggcactgataacagcgcaggacaggtggta
gaggagctcatccagaactaccaggatatcttcaatgtgaatgctgagcagcttcagagg
cagctggacatgatctctcatgtcatcaaagcacaggaggatcacgccgaggaggggacc
ccctcacctctcaccatctgtgggatttacctggagaggaaggaggagggctctgagctg
ctggttcagatctcccaggcagtgagtgctgaggagctagtgtgtgaggtcctgagacgc
gggaacatccctccacagcagggggactattggagctgcttcctggtcaatgacaaccag
gagatggagcgtccattgcactaccaggaacgagcgctggccatctatttctctctgggt
aaagactgtcacctggtggtcaagcggaactgctacatggaggccatgttaatctacata
gctgccatggtagacgtgtccagaaacagcatgattaagttcagtgatgagaagggtcag
agggggaagagaaccttcagcagacgcctctgtgtactcgatggcacctctctcaggctc
tacaaagaagtaaagagtactcagcctgagagggaatgtcaagtccatgctctgaaagtc
tactatggcatcaagaagaggctacagccaccatcatgctgggggatgactgtagtgtgt
gagcaggcagaacaagacaaacagcagtggtacctgtgctgtgaatcaaagaacgaattg
atcaagtggctggccacttttatgaacctccagcacaatagtgacctgtgtcctgcagct
tccaggccagattcctga
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