Oncorhynchus nerka (sockeye salmon): 115135803
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Entry
115135803 CDS
T07952
Symbol
ercc6l
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115135803 (ercc6l)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
115135803 (ercc6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
AAA_34
SWI2_SNF2
TPR_1
DEAD_2
DUF6470
TPR_11
MAS20
Motif
Other DBs
NCBI-GeneID:
115135803
NCBI-ProteinID:
XP_029526752
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Position
LG10:43455851..43464546
Genome browser
AA seq
1316 aa
AA seq
DB search
MDNSNHLIAKMSEKLEKSLSMDTEEMETYQRYIRDGKDAARQGNMSKSLELFKLAHDIHP
GDKLWSRIKKLQEAIKEMTQQGSESEDEDFVNVNNSGLMLFKEMYDKLYDHQQEGVAFLY
GLHRDGRQGGILADDMGLGKTIQVISFLSGMYDADLVKHTLLIMPTSLIKNWTKEFTKWT
PGMRVKEFHGTSKVERNRNLEKIQRRGGVIITTYQMLITNWELLSSYNGREFKWDYVILD
EAHKIKTSSTKTAKSAHAIPARNRVLLTGTPVQNNLREMWALFDFACQGALLGTSKTFKT
QYESPITRAREKDATPGEKALGLKMSENLMAIINPYFLRRTKAEVQRKTQNRVKACEKDL
ENEVPSSSGGGGGGAEMPNLTRKNDLIIWTYLSSVQEEIYNQFLSLDNIKELLMTTRSPL
AELNILKKLCDHPRLLSARAVAQLGLEEGTSANYHDENESAAHRIDNISDETLISESGKM
MFLIALLERLKEEGHRTLVFSQSRKMLDILERVLVNKRFKIVRLDGTVAHLTERERRIQM
FQTNKQYSVFLLTTQVGGVGITLTAANRVVIFDPSWNPATDAQAVDRAYRIGQTENVVIY
RLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSKQDLKELFTLQDTRSSSTQLQL
QSLHSRQRLTDPKLDEHIAHLHSMEMFGISDHDLMFSHEVANNEDDPGDQEAHKYIENRV
QKAQELMKVESELQQQFADSIESNTEPAHLRKPPQHNTVASTEKKPRNEKPSPSYPSHNH
NFNSPVLVDLTHFGSGDEEDIHNLSNKFIDLAVDESIEIIGPTVTFATEEQFIKRNHLSP
IDTSLEVLLDGEPIYTSAQEILDVSSEANDDIVAVGHVTSEVEQDNQPNGNGSPQWQNLS
LHKDLTMDQKISPVKSQKNQRLSMLLQMSNKSIESHAETSSKVDELESFGGNFNLQLEDS
ASDMFPEEESESIVGNSGFQLEMDVSFNADDKPSVTGAVEQNGADVYVNYPVSENSFITT
LKKKKRKALLYNSEEDDIDEDETPHLMNRKLDEEFHGIGSSTPKSVKSGSISFKSRKSLG
VNTSVASRRSFVDSVIEHVEDLDEDMEAEVLQVHTDDASEESEVTGSCEVTGFHESLMEE
EPTGETLNTENEEESEEGGSEPMHVEESEMGEEEESSLEESTGDHELVSSERMDQCASGK
DATLQTVECVNNSCDSSAMTEEKMYENHVENGKQSFSEGKLDDALKFFLKAIDIKSGDPE
IQLMTIQLYRRLGEGGGGGSEVFLKSVNSLLSSTCTHNVSLTDRGVFLKVCLVKLC
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggacaactcaaatcacctaattgcgaagatgtcggagaaattggagaagtcattgtca
atggacactgaggagatggagacctaccagaggtacatcagggatggaaaagatgctgcc
agacaaggaaatatgtcaaaatcattggaactgttcaagctggcccatgacatccaccct
ggtgataaactttggagcaggataaagaaacttcaggaggctataaaagagatgacacag
caaggctcagagagtgaggatgaagattttgtcaatgtcaacaacagtggtctaatgctt
ttcaaagaaatgtatgacaaactgtatgatcatcagcaagagggggttgcttttttgtat
ggtctccacagagatggtcgtcaaggaggaatcctagctgatgacatgggcttagggaag
acaattcaggtcatatcgtttctctctggtatgtatgatgctgacttggtaaagcatacc
ctgctcatcatgccaacctcactcatcaagaactggaccaaggaatttaccaaatggact
cctggaatgagagtcaaagagtttcatggcacaagcaaagtggaacgcaacaggaacttg
gagaagattcaaagaagaggtggtgtcatcatcactacataccaaatgctgatcactaac
tgggaacttctctcgtcttacaatggtagagaattcaaatgggattatgtaatcctagat
gaggcacacaagatcaaaacctcctcaaccaagacagccaaaagtgcacatgcgattcct
gccaggaatcgtgtacttcttacaggcacacctgtacagaataacctgagagaaatgtgg
gctctttttgattttgcttgtcaaggggcacttcttggtacttctaaaaccttcaaaaca
cagtatgaaagtcccatcacccgtgcaagagagaaggatgccaccccaggtgagaaggcc
ctggggctcaagatgtcggagaacctcatggccatcataaatccatacttcctaaggagg
acaaaggcagaagtacagagaaaaacacaaaaccgtgtgaaagcctgtgaaaaggacctt
gaaaacgaagtcccaagtagtagtggtggtggtggtggtggtgcagaaatgccgaacctc
accaggaagaatgatctaattatctggacgtacctgagctcagttcaggaggaaatctac
aatcagttcttatccctagataacatcaaggagctgctcatgaccaccaggtcaccgttg
gctgaactgaatatcctgaagaaattgtgtgaccacccaagacttctctccgccagggct
gtcgctcagttaggcctagaagaaggaacaagtgcaaactatcatgatgaaaatgaatct
gctgcacacagaatcgacaacatatctgatgaaacactaatatcagaatctggaaagatg
atgtttctcattgcacttttggaaaggcttaaggaagaaggccatcgcacacttgttttt
tctcagtcaaggaagatgttggacattcttgaacgggttctagtgaacaagcgtttcaag
attgtgagacttgatggcacagtagcacacctcacagaaagagagcggcgcatccaaatg
ttccagaccaacaagcaatactcagtctttctcctaaccacccaagtgggaggagttggc
atcacattgacagcagcaaaccgagtagttatttttgaccccagctggaatccagccact
gatgcccaggccgttgaccgggcctaccgcattggacaaacggagaacgttgtcatctat
agactgatcacttgtggcacagtggaggagaagatctacagacggcaggtgttcaaagac
tccttgatcagacagaccaccggggacaagaaaaatccattccggtacttcagcaaacaa
gacctgaaagaactcttcacactacaagacactcgatcctcatcaacacagctgcagctg
cagtcactgcactcgagacaaagactcacagatcctaaattggatgaacacatcgcccac
cttcactccatggagatgtttggaatatctgatcatgacctcatgttctcgcatgaagta
gcaaacaacgaagatgaccctggggatcaggaagctcacaagtacatagagaacagggtg
cagaaagctcaggagctgatgaaggtggaatctgagttgcaacagcagtttgctgacagc
attgagtcaaacactgagccggcacatctgcggaaaccccctcaacacaatacagtggcg
tcaactgagaagaagccaaggaatgaaaaacccagcccctcctatcctagccataaccac
aacttcaactcccctgtgttggtggatcttacccattttgggtctggtgacgaggaagat
atccacaatctgagtaacaaattcattgatctagctgtagatgaaagcattgagattata
gggcccactgtgacatttgcgactgaggaacagttcataaagcgcaaccatctttctccc
atagacacttctcttgaggtgttgttggatggtgagccaatttacacttccgctcaagag
attttggatgtgtcatcagaagcaaatgatgatattgttgccgtaggacatgttacctct
gaagtggaacaagacaaccagccaaatggcaatggttccccacaatggcagaacttgtca
cttcacaaagacttgacaatggaccagaagatctcacctgtcaaatcccagaagaatcaa
agactttctatgctactacagatgtccaacaagagcatagaaagtcatgcagaaacatcc
tccaaagttgatgaacttgagtcttttggaggaaatttcaatctacagttagaggacagc
gctagtgatatgttcccagaagaggaatccgagtccattgtgggaaattcaggtttccag
ttagagatggatgtcagcttcaatgcagatgacaagccttctgtgactggagctgttgaa
cagaatggagcagatgtttatgtcaattaccctgtttctgaaaactcattcattactact
ttaaagaaaaagaaaagaaaagctttactttacaatagtgaggaggatgacattgacgaa
gatgagacgcctcatttgatgaacaggaaattggatgaagaattccatggtattggttcc
tccacaccaaaatctgttaaatctggatccatttcctttaaaagcaggaaaagcttggga
gtgaacacctctgtggcctcaagacgttcctttgtggattccgtgattgagcatgtagag
gaccttgatgaggacatggaagctgaggttttacaggtgcacactgatgatgcaagtgag
gaaagtgaggtgactggatcttgtgaggtgactggatttcatgagtctctcatggaagag
gaacccacaggggaaaccttaaacactgagaatgaagaggaaagtgaggaaggtggaagt
gagccaatgcatgttgaagaatctgaaatgggagaggaggaagaaagttctttggaggaa
tctaccggtgatcatgaacttgtttctagtgaaagaatggaccaatgtgccagtggaaaa
gatgccacattacagactgtggaatgtgtcaacaacagctgtgattcctcagctatgact
gaagaaaagatgtatgaaaaccatgtggaaaatggaaaacaatctttctctgaggggaaa
cttgatgatgccttgaaattctttttgaaagcaattgacataaaaagtggtgatcctgaa
attcagttaatgacaattcaattgtaccgtcggctcggtgaggggggggggggggggagt
gaagtatttttgaaaagtgtgaactcattgctgtcatctacatgtacacacaatgtatca
ctcactgataggggtgtctttttaaaggtgtgtcttgtaaaactatgttga
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