Oncorhynchus nerka (sockeye salmon): 115135804
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Entry
115135804 CDS
T07952
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00061
Fatty acid biosynthesis
one00071
Fatty acid degradation
one01100
Metabolic pathways
one01212
Fatty acid metabolism
one03320
PPAR signaling pathway
one04146
Peroxisome
one04216
Ferroptosis
one04920
Adipocytokine signaling pathway
Module
one_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115135804
00071 Fatty acid degradation
115135804
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115135804
09143 Cell growth and death
04216 Ferroptosis
115135804
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115135804
03320 PPAR signaling pathway
115135804
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
one01004
]
115135804
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115135804
Enzymes [BR:
one01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115135804
Lipid biosynthesis proteins [BR:
one01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115135804
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of breast milk
115135804
Exosomal proteins of breast cancer cells
115135804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115135804
NCBI-ProteinID:
XP_029526753
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Position
LG10:43466609..43484187
Genome browser
AA seq
710 aa
AA seq
DB search
MMFKVDMHYIVFLPVYLLMWLYTLITFIPWYFLTNAGKKKAMAKREKAKSTTGKAEGPYR
CVENFDNLAREDFEGKDTLDKLFEHAVQRFGNTDCLGTRELLNEENETQPSGKIFKKLIL
GEYRWLSYDEVDQIISHLGSGLAALGQQPKSTIAIFCETRAEWMITAQACFRRNFPLVTL
YATLGEEAVAFGLNECGATHLITSAELLETKLKNVLPDMPNLKHVIYVDNKSISRTGYPE
GIQIYSMQAVQELGAKPDNLSVAVQRPQPTDLAVVMYTSGSTGRPKGVMIIHSNLIAGMT
GQCERIPGLGPKDTYIGYLPLAHVLEMTAEISCMTYGCRIGYSSPQTLSDQSTKIKKGSK
GDCSVLRPTLMAAVPEIMDRIYKNVMNKVQEMSYVQRTLFKLGYNYKLEQIKMGYDAPLC
NMLLFKKVKALLGGNIRMMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITEV
ADYSTGRVGAPLICCEVKLRDWVEGGYTSQDQPHPRGEIMIGGPNVTMGYYKSEHLNNDF
WVDEQGQRWFCTGDVGEIHSDGCLQIVDRKKDLVKLQAGEYVSLGKVESALKNCPLIDNI
CAYANSDQNYVISFVVPNQKQLTTLANNNGISVAWEEICNHPAMEKEVLKAIKEVAASIK
LQRFEIPVKVRLSPEPWTPETGLVTDAFKLKRKELKNHFQTDIERMYGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcaaagttgacatgcattacatagtcttcttgcctgtgtacctattgatgtgg
ctgtacactctcatcacgtttatcccatggtatttcctcactaatgctggaaagaagaaa
gccatggccaagagagagaaagccaagtccaccacaggcaaagcagagggcccctatcgt
tgtgtggagaactttgacaacctggcccgtgaggactttgagggaaaggacactctagac
aagctgtttgagcatgcagtgcagcgcttcggcaacacagactgcctgggtaccagggag
ctcctaaatgaggagaacgagacgcaacccagcggcaagatctttaagaagctgatcctg
ggggagtacaggtggctgtcctatgacgaggtggaccagatcatcagccatctaggtagt
ggactggcagccctgggccagcagcccaagagtaccatcgccatcttctgtgagacacgg
gcagagtggatgatcactgcacaggcctgcttcagacgcaactttccattggtcactctg
tatgccaccctgggggaggaagcggtggcctttgggcttaatgagtgtggggccacacac
ctgatcaccagcgcagagctactggagactaaactcaagaatgttttgccagatatgccc
aacctgaagcacgttatatatgtggacaacaagagcatcagccggacgggctaccctgag
ggcattcagatctacagcatgcaggcagtacaggagttgggagccaaacctgacaacttg
agtgtagctgtgcagcgcccccagcccacagatctggctgtggtcatgtacaccagcggc
tccacaggacgacccaaaggagtcatgatcatccacagcaacctgatcgctggcatgacg
ggccagtgtgagaggatcccaggactggggccaaaggatacctacattggctacctgcct
ctagctcatgtgctggaaatgactgctgaaatctcatgtatgacgtatggctgcaggatt
ggctactcttctccacaaacactctctgaccagtcaacaaaaatcaagaagggcagtaaa
ggagactgctctgtgttgaggcctactctgatggcagctgtaccggaaataatggaccgc
atctacaagaatgtgatgaacaaggtgcaggagatgagctatgtgcagaggactctgttt
aaactgggctacaactacaaactggaacagatcaaaatgggctacgatgccccactctgc
aacatgctgctgtttaagaaggtgaaggctctgctgggagggaacatcaggatgatgctg
tcaggaggagcgcccctgtcctccgccacccagcgcttcatgaacatctgcttctgttgc
cccgtgggacagggctatggcctcacagagacctgtggagcaggtaccatcacagaggtt
gcagactacagcactgggagagtaggagcccccctcatctgctgtgaggtgaaactacga
gactgggttgagggtggatacaccagccaggaccaaccccacccccgtggagagatcatg
attggtgggcccaacgttaccatgggttactataagagcgagcacctgaacaatgacttc
tgggtagatgagcagggccagaggtggttttgtaccggggatgtgggggagatccactct
gatggctgtctgcagatagtggaccgtaagaaggacctggtcaaactgcaggctggagaa
tatgtgtccttggggaaagtggagtctgctctgaagaactgcccccttattgacaacatc
tgtgcatatgcaaacagtgaccagaactacgtgataagctttgtggtaccgaaccagaag
cagctgacaactctggccaataacaacggcataagtgttgcctgggaggagatctgtaac
cacccagccatggagaaggaggtcctgaaggccatcaaagaggtggctgcctcaatcaaa
ctgcaacgttttgagatcccagtgaaagtgcgtctaagcccagagccctggacccctgag
actggcctggtgacagatgcattcaaattgaagaggaaggagctgaagaatcactttcag
actgatatagagagaatgtacggagggaagtag
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