Oncorhynchus nerka (sockeye salmon): 115135805
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Entry
115135805 CDS
T07952
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115135805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115135805
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115135805
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Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
115135805
NCBI-ProteinID:
XP_029526758
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Position
LG10:43488538..43510746
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AA seq
1271 aa
AA seq
DB search
MIAAQELHTEFQFPQEADTQLSSDTDLEDPDVKNAKLGKGKAGKKGKKAPGEKGKGGAAK
GSGLGRVNGHHQENGMENMTLFEVVKMGKSATQSVVDDWIESYKNDRDIALLDLINFFIQ
CSGCKGAVSAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPLWKKFKSSFCEFIGVLV
RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN
TQRQYEAERNKVMAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAE
IRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNTR
LELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLHSSDEVLTAEDCESVYHLVYSAHRP
VAVAAGEFLYKKLFSHRGPEEEGMPRRGRQSVNGNLIKTTVFFFLESELHEHGAYLVDSL
WECAGELLKDWESMISLLLDEPMPGEEALTDHQETALIEIMLCAIRQACECHPPVGRGTG
KRVLTAKEKKAQLDDRTRITEIFAVALPLLLAKYSVDAEKVTNLLQLPQFFDLEIYTTGR
LEKHLESLLRQIREVVEKHTETDVLEACSMTYHALCNEEFTIFNRVDIARSQLLDELVDK
FNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFTSNYKLLNTGLQNGD
MPEQIVIHAMQCTHYVILWHLAKVSEGSSTKADMVTLRKQMRGFCLMCQSYLTSVNTTVK
EQAFTILCDALMIFSHQIVSSSREQLEALIYTPDSTLQAELLNFILDHVFIDQDDDNNST
DGQHDDEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETM
SKTRQIDKIQCAKTLILSLQQLFNEMLSDLGCNFDRSSSSFCGIKELARRFSLTFGLDQL
KTREAIAMLHKDGIEFAFKEPSPQGEGNPPLNLAFLDILSEFSSKLLRQDKKTVHLYLER
FMTFQMALQREDCWLPLISYRNSLQAGGDDDTMSVISGYSSRGSSIRSKKAKPASTGKRK
LPEEESSSCSTDAVWMNREQNVQTPVMMPSPHLSSTVLRDPKKMRPEESYMGVYSITSEQ
QQQPLPPQQQHHQTPMDYNTQVTWMLAQRQQAEARQQQERASMQYAKMRSHMQHAIRRSS
GLMEDDEEPIVEDVMMSSEDRLEDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPSSI
MDDSVLNVSMF
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcacaggagttgcacacagagtttcagtttcctcaggaggctgatacacag
ttgtcctctgacacagaccttgaggaccctgatgtcaaaaatgcaaagcttgggaaagga
aaggcgggtaagaaggggaagaaagcccctggagagaagggaaagggtggggcagcgaag
ggttctggccttggccgggtgaatggtcaccaccaggagaatgggatggagaacatgacc
ctgttcgaggtggtgaaaatggggaagagtgccacgcagtctgtcgttgatgactggatt
gagtcttacaagaacgatcgagacattgcactcctggacttgatcaacttcttcatccag
tgctctggctgtaaaggtgctgtcagtgcagagatgttcaggcacatgcaaaactctgaa
ataatcaggaagatgactgaggagtttgacgaggacagcggggactacccgttaaccatg
gcagggccactgtggaagaagttcaagtcgagcttctgtgagtttatcggggtgctggtg
cggcagtgtcagtacagcatcatctatgatgagtacatgatggacacggttatctcgctg
ctcacgggcctgtctgactcacaggtccgagccttcagacacaccagcaccctggcagcc
atgaagttgatgaccgccttggtgaacgtggctctgaacctgagcatcaacatggacaac
actcagaggcagtacgaggcagagaggaacaaggtcatggccaagagggccaatgatagg
ctggagctcctgttacagaagcgtaaagagcttcaagaaaatcaagacgaaattgaaaac
atgatgaatgcgattttcaaaggagtgtttgttcacagatatcgtgatgctatagctgaa
atccgtgcaatttgcattgaggagattggtgtatggatgaagatgtacagcgatgctttt
ctcaatgacagttatctgaagtatgtcggatggaccatgcatgacaagcaaggtgaagtg
cgtctcaagtgtctgactgcgctccagggcctgtactataaccgggagctcaacactcgg
ctggagcttttcaccagccgcttcaaggaccgcattgtgtcgatgactctggataaggag
tatgatgttgcagtgcaagccataaaacttctgactcttgtcttgcatagcagtgatgag
gtcctgacagcagaggactgtgagagtgtctaccatctggtctactctgctcatcgacct
gtggctgtggctgcaggagagttcctctataagaagcttttcagccatcgaggtccagag
gaggaagggatgcccaggaggggcaggcagagcgtcaacgggaacctcatcaagaccacc
gtcttcttctttctggagagtgagctccatgagcacggggcctacctggtggacagtctg
tgggagtgtgcaggggagctgctcaaagactgggagagcatgatcagcctgctgctggat
gagcccatgccaggggaggaggccctgactgaccaccaggagactgctctgatagagatc
atgctgtgtgccatccgccaggcctgtgagtgccaccctccagtgggcagaggcacaggg
aagagggtcttgacagcgaaggagaagaaagcccagctggatgaccggacgagaatcact
gagattttcgctgtggcgttgcctctgttgttggctaagtactctgttgatgctgagaag
gtgaccaacttactgcagctgccgcagttctttgacctggaaatctacaccactggtcga
ttggaaaagcacttggagtcgttgctgcgtcagatcagggaggtggtggagaagcacaca
gagactgacgtgctggaggcgtgctccatgacctaccacgctctctgcaacgaggagttc
accatcttcaacagggtggacattgccaggtcccagctactggacgagctggtggacaag
ttcaacagactccttgaggacttcctacaagagggtgaggaaccagatgaggatgatgcc
taccaggtcctgtccacactgaagaggatcactgcgttccacaatgcgcatgacctctct
aaatgggacctgttcaccagcaactataagctattaaacacaggacttcagaatggtgat
atgcctgagcagattgtcattcatgcgatgcagtgcacacactatgtcatcctgtggcac
ctagccaaggtttcagagggcagctccacaaaggcggacatggtgaccctgaggaagcag
atgaggggtttctgtctgatgtgccagagctacctcaccagtgtcaacaccaccgtcaaa
gagcaggccttcaccatcctgtgtgacgccctgatgatcttcagccaccagattgtgtcg
tcgagccgggagcagctggaggctctgatctacacgccagactccaccctgcaggccgag
ctgctcaacttcatcctggaccacgtcttcatcgaccaggacgacgacaacaacagcaca
gatgggcagcatgatgatgaagccagtaaaatcgaggctttacacaagaggcggaacctg
ctggcagcgtactgcaaactgatcatttacaatgtagtggagatgaacactggagctgat
atcttcaagcagtacatgaggtactacaacgactatggagatatcatcaaggaaacgatg
agtaaaacaagacaaattgacaagatccagtgtgccaagaccctcattctgagtttgcag
cagcttttcaatgagatgttatctgacctcggctgcaactttgaccgctcgtcgtcgtcc
ttctgcggcattaaagaactggcccgacgtttctcgttgacctttggcctggatcagctg
aagaccagggaggctatcgccatgttacacaaggatggaatcgagtttgccttcaaggag
cccagtccccagggagagggaaaccctcctctcaacctagccttcctggacattctcagc
gagttctcctctaaactgctgcgtcaggacaagaagactgttcacctctacctggagcgg
tttatgaccttccagatggccttgcagcgagaggactgctggctgcccctcatctcctac
aggaactccctgcaggccggaggggacgacgacaccatgtctgtcatcagcggctacagc
agccgaggttccagcatcaggagcaagaaggctaagccagccagcaccgggaagaggaaa
ctgcctgaagaggagagtagcagctgcagcacagacgctgtgtggatgaaccgggagcag
aatgtgcaaacgccagtgatgatgccctcaccgcatctcagctccactgtgctgagggac
cccaagaaaatgaggccggaggagagttacatgggcgtctacagcataacatccgagcag
cagcaacaaccgctgcccccccagcagcagcaccatcagacccccatggactacaatacc
caggtgacctggatgctagcccagagacagcaggcagaggcccggcagcagcaggagcga
gccagcatgcagtatgccaagatgagaagccacatgcagcatgcaatccgccgcagttca
ggactcatggaggacgatgaggagccaatagtagaagatgtaatgatgtcatcagaggac
cgtttggaagatctcaacgagggcatggatttcgacactatggatattgatctgccacca
tcgaaaaatcgtagagagagatcggagctgaagcctgactactttgacccttcttccatc
atggatgattcggtcctcaatgtttcaatgttctaa
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