Oncorhynchus nerka (sockeye salmon): 115135806 Help Entry 115135806         CDS       T07952                                  Name (RefSeq) THO complex subunit 2-like   KO K12879   THO complex subunit 2 Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one03013   Nucleocytoplasmic transport one03040   Spliceosome Brite KEGG Orthology (KO) [BR:one00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     115135806   09122 Translation    03013 Nucleocytoplasmic transport     115135806  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:one03019]     115135806    03041 Spliceosome [BR:one03041]     115135806 Messenger RNA biogenesis [BR:one03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      115135806 Spliceosome [BR:one03041]  Complex C   Other components    EJC/TREX     115135806  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     115135806 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  115135806 NCBI-ProteinID:  XP_029526760 LinkDB All DBs Position LG10:43511808..43578865 Genome browser AA seq 1590 aa AA seqDB search MCGILGKMATLILPADWIKNWEKSGKHEFVQLCKNLADKTNHDSIIKDIQAALYELCWHV VQGNFKLDLAASVLSDMMELRDDMPSILADVFSILDIETSSLEEKNKRDHYTQLVGACLL FVPDAILKERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLI TELGQDLSGNITSHIVLESIKSLIGCFNLDPNRVLDIILEVYECRSDQDEFFLPLIKSYM CEPLTLCHILGFKFKFNQEPNEETPTSLYHIAAALLHHKLIELEDLYVHLMPLDASIVEE HKREITEAKQIARKLTMVVVPSEKMEDKEREKEKEEEKNDKPPDNQKLGLLEALLRIGDW HHAQSIMDQMPAFYATSHKAIALALCQLLHLTVEPLYRRAGVPKGAKGCVMRPLRNKRAP RPAESFEDLRRDVFSMLCYLGPHLSHDPILFAKIVRLGKGFMKEYQNEARNDHIKDKMDT LLSCFLSIADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYTSHPLL VKVKAQTVDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLIGPVV DSLKYLTSLNYDVMAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELA GLLQYVTNTLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQMEAMTGGEQLKAEGGYFGQ IRNTKKSSQRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGKLYDQCHDTLV QFGGFLASNLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYGHQILSKYDELKKAEK SNRQQQKVHKYVAACELVMSPVHEAVVSLHPPRVWDDLRPQFYATFWSLTMYDLAVPHNA YDREVKKLQVQVKTIEENPDVPMNKKKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLKL EKDNWLLAKSTKNETITKFLQLCLFPRCIFSAIDAVYCARFVELVHQQKTPNFCTLLCYD RVFSDIIYTVASCTENESRRYGRFLCCMLETVTRWHSDRAVYEKECGNYPGFLTIFRATG FDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPCYPKVL NLGQALECRVHKICLEEKEKRPDLYALAMGYSGQLKGRKVHMVPENEFHHKEQPVRSATT ASQLNGPGTTAKPATNASKTEEGACEDADRSKDKSQGTAKPVNKANSTVAKMTSSNGNGA PNSTKAIKERDDKEKSGKEKKEKKEKTPGSTPETKGESRREKQRDERGAAGKEERAPREG KEKTPKADRDKQKAEEKSNKEDNKAKAGNGEPKELSRERDTGAKESKTKEKGGDQSKEKG GDRSAVSGSLKSPVPRSESAESERDHKRRKVDTHSSPSHSSSVKDNSNEPKDSASKLGID TTSPTIRSRSKSRERETDQKESENTRGRSKEKKTEDKDRKDRKRDHVTTDREMSLESKRR KDENGTNSSNKHSKSASPSSDSPVSADKEKTKRSKSSSKEKGESTKPERNSSGGKKESRH DKDKPDKKEKRDSSGGKEEKKHHKSSDKHR NT seq 4773 nt NT seq  +upstreamnt  +downstreamnt atgtgtggtattttggggaagatggcgacacttatcctgcctgctgattggatcaaaaac tgggaaaaatctggaaaacacgagtttgtacaactatgtaagaatcttgcagacaaaacc aatcatgacagcataataaaagatatacaggctgctttgtatgaactctgctggcatgtc gtacaagggaacttcaagctggacctcgctgctagcgtcctcagtgacatgatggaactg cgcgatgacatgccatccattttagcagatgttttcagtatactggacatagagaccagt tctttggaggaaaaaaacaaacgcgaccattacacccagctagtgggagcatgtctgtta tttgtgccagatgccatcctgaaggagagactggacccagagaccctggagtccctagga ctcataaagcaagcccatcagttcaaccagaaaatcgtcaaaatcaagaccaagctattt tacaagcagcagaagttcaacttgctaagggaagagaatgagggctatgccaagctgatc actgagctgggccaagacctctcaggcaacatcactagccacatcgtcctagagagcatc aagtccctgataggatgcttcaacctggaccccaaccgcgttctggacatcatcctggag gtgtacgagtgtcgctctgaccaggatgagttcttcctgcccctcatcaagtcctacatg tgtgaacccctcaccctctgccacatcctgggcttcaagttcaagttcaaccaggagcct aatgaagagacccctacttcactctaccacattgctgccgccctcctccaccacaaactc atagagctggaggacctctatgtgcatctgatgccactggatgccagcattgtagaggag cacaagagagagatcacggaggccaagcagatcgcccgcaagctcaccatggtggtggtg ccctccgagaagatggaggacaaggagagagagaaggagaaagaggaggagaagaacgac aagcctcctgataaccagaagctgggcctgctggaagcgctgctgaggatcggagactgg caccatgcccagagcattatggaccagatgcctgccttctacgccacctctcacaaggcc atcgccctggcactgtgccagctgctgcacctgactgtggagccgctgtaccgcagagcc ggggttcccaaaggggccaagggctgtgtgatgaggcccctgaggaacaagcgggcccca aggcctgccgagagctttgaggacttacgcagagacgtgttcagcatgctctgctacctg gggcctcacctctcccatgaccccatcctctttgccaagatagtacgactgggcaagggc ttcatgaaagagtaccaaaatgaggctagaaatgaccacatcaaggacaaaatggacacg ttgctgagttgtttcctgagcattgcagaccaggtgctgctgccctcgctctctctaatg gagtgtaacgcctgcatgtcagaagaactctggggcctcttcaaactgttcccttaccag cacaggtaccggctatacggtcagtggaagaacgagacgtacaccagccacccactgctg gtcaaggtcaaagctcagactgtggacagagctaaatacatcatgaagcgattgaccaaa gagaatgtgaaaccatctgggcggcagataggcaagctgagccatagcaaccccaccatc ctctttgactatatcctgtctcagatccagtggtatgacaacctcatcggtccagtggta gactccctcaagtacctcacctcactcaactatgatgtcatggcctattgcattattgaa gcgctggccaatccagagaaagagaagatgaaacatgacgacactacgatatcctcctgg cttcagagcctggctagtctgtgtggagctgttttcaggaaatacccaatcgagttggcc ggcctcctccagtatgtgaccaatacgctgaaagcagggaagagttttgacctgctgatt ctaaaagaggtggtgcagaagatggccggcatcgagatcacggatgagatgacatcagag cagatggaggctatgactggaggggagcagctcaaagctgagggtggttactttggtcag atccgtaacactaagaagtcgtcccagcgtctaaaggatgccctgttggaccatgagctg gctctgcccctctgtctcctcatggcccagcaacgcaacggggtggtctttctagagggg ggcgagaaacacctcaaactggtgggaaagctctacgaccagtgtcacgacaccctggtc cagtttggtggcttcctggcatccaacctgagtactgaggactacatcaagcgtgttccc tccattgacatcctgtgcaaccagtttcacaccccccacgacgctgccttcttcctctca cgcccaatgtacggacatcagatcctgtctaagtatgatgagctgaagaaagctgagaag agcaaccggcagcagcagaaggtccataagtacgtggctgcgtgcgagctggtgatgtcg ccggtgcatgaggctgtggtgtccctgcacccaccccgcgtctgggacgacctccgaccc cagttctacgccaccttctggtcgctgaccatgtacgacctggccgtgccacacaacgcc tacgaccgcgaggtgaagaagctccaggtccaggtcaagaccatcgaggagaaccctgat gtgcccatgaacaagaagaaaaaggagaaggagcgctgcacggccctacaggacaagctg caggaggaggagaagaagcagctggagcacgtccagagggtcctgcaccgcctcaaactg gagaaagacaactggctcctcgccaaatccaccaagaatgagaccatcactaagttcctg cagctgtgtctgttccctcgctgtatcttctctgccatcgacgctgtgtactgcgcccgc tttgtggagctggtgcaccagcagaagacccccaacttctgcaccctgctctgctatgac cgggtgttctctgacatcatctacacggtggccagctgcacagagaacgagtcgcggcgc tacggacgtttcctgtgctgcatgctggagactgtgacccgctggcacagcgaccgtgct gtctacgagaaggagtgtggtaactacccaggcttcctgaccatcttcagagccacaggc ttcgacggagggaacaaagccgaccagctggactatgagaacttcagacacgtggtgcac aaatggcactacaagctgactaaagcatcagtccactgcttggagacgggggagtacacc cacatccggaacatcctcatcgtgctgaccaagatcctgccttgttaccccaaagtgctg aacctgggccaggcgctggagtgccgcgtccacaagatctgtctggaggagaaggagaag aggccagacctctatgccttggctatgggctattctggccagttgaaaggcaggaaagtg cacatggtccctgagaatgagttccaccacaaggagcagccggtgcgtagcgccaccact gccagccagctgaacggccctggcaccacagccaagcctgccaccaacgccagcaagacg gaggagggagcctgcgaggacgctgaccgatccaaggataaatctcaggggacggcgaag ccagtgaacaaagccaacagcacagtggccaaaatgacttccagcaatgggaatggtgct cctaacagcaccaaagccatcaaagagagggatgacaaagaaaagagtgggaaggagaaa aaagagaagaaggagaagactccaggcagcactccagagacaaagggggagagccggcgg gagaagcagagggacgagagaggagcagccggcaaggaggagcgggcgccacgagagggt aaggagaagacgcccaaggcagaccgggacaagcagaaggcggaggagaagagcaacaaa gaggacaacaaggccaaagccggcaatggagagcccaaggagctgtccagggagcgcgac actggagccaaggagtccaagactaaggagaagggaggagaccagagtaaggagaaggga ggagacaggagtgctgtgtccgggtccctcaagtctccagttccccgatctgaatctgct gaatctgagagggatcacaaaaggcgaaaagtcgatacccactcttcaccatcccactct tcctctgttaaggacaatagcaacgaacccaaggactctgcatccaagttagggatagac accacatcacctacaattcggtcgcggtccaagagcagagagagggagacggaccagaaa gagtcagagaatacccggggccgttccaaagagaagaagaccgaagacaaagaccgaaag gacaggaagagagaccatgtgaccactgaccgtgagatgagcctagaatccaaacgcaga aaagatgaaaatggaaccaattcctccaacaaacacagcaagagcgccagtccctcctca gactccccggtctcggctgacaaagagaagaccaagaggtccaagtcctccagcaaggaa aagggagagtctactaaacctgagagaaactcttccgggggcaagaaggagtctaggcat gacaaagacaaacctgacaagaaggagaagagggacagcagcggcggaaaggaagagaaa aaacatcataagtcctccgacaagcacagataa

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