KEGG   Oncorhynchus nerka (sockeye salmon): 115135825
Entry
115135825         CDS       T07952                                 
Name
(RefSeq) DNA repair protein XRCC1-like isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115135825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:one03400]
    115135825
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     115135825
SSDB
Motif
Pfam: XRCC1_N zf-C2HC_2 IBR_1
Other DBs
NCBI-GeneID: 115135825
NCBI-ProteinID: XP_029526798
LinkDB
Position
LG10:complement(44062189..44067295)
AA seq 452 aa
MAPVKIKHVVSFTSQDPKNCVENLCVVGGDSRSWLCNPQDRSGVLRAELQLERASYFGYI
DVGNCGSAFIQIDVGRSSWPLDQPYITLLPTATLMSPAESRQGTGLTGVRMFKKGDFLSE
GAEDSWDRVRVTCTQPFNKRSQFGLSFLRIRSPLEESEEGSTQTFKENQGQTTPDKSASG
VREWLSSPAVQRTFFGGAKGEGVVLSRTARMVLTASQAARRSLSLPSTSLSPSHTSSSGT
QNTETSSPPTAKPDATTHIPNQGKPGAHTATHNKGKPVGNMGNIHPHTASMACLSTVRSS
KENTSQRQLKRKPNSKSRQNQLNGTTSSKHGKPAVCKRPIATLQHTATVPHPHPSPEPQD
TGDLETTCPICGVFFTAEYLPLHAASCQQVATRKLPGGIVTPVPRPFPVSPASLEESMVP
CPLCSFKFSLSHIQMHASTCGDPVDPHVIWVD
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggccccagtgaaaattaaacacgtcgtttcattcacgtcacaggaccccaagaactgt
gtggagaacctatgtgttgtgggtggagacagcaggtcgtggctgtgcaacccccaagac
cgaagtggagtcctcagagcagaactgcagctggagcgagcctcatactttggatacatc
gatgtggggaactgtggatctgcgttcattcagattgatgtcggccggtcctcttggccc
ctggaccagccctatatcaccctgttgccaacagcaacactgatgagtccagcagaatcg
cgacagggcactgggctgacaggagtgagaatgttcaagaaaggtgatttcctgtcagaa
ggtgcagaggacagctgggaccgggtgagagtaacctgcacccagccttttaacaagcgc
tctcagtttggcctgtccttcctgcgcatccgcagccccctggaggagagcgaggagggc
tccacacagactttcaaagagaaccagggtcagacaaccccagacaaatcagcatcaggc
gtgagagaatggctgtcgagccctgctgtgcagagaaccttctttgggggagcgaaaggg
gagggtgtggttctgagccggacagctcgtatggtcctcacagcgtcccaggctgccagg
cgttccctttcccttccttccacttccttgtctcccagtcacacatcatcctctggcact
cagaatacagaaacctcttcccctcccacagccaagccagatgcaactactcatatcccc
aaccagggaaagccaggggctcatacagctacacacaacaaaggcaagccagttggaaat
atgggaaatatacaccctcacacagcttcaatggcttgtttaagcacagttcgcagctcc
aaggaaaatacttctcaaagacagctgaagagaaaaccgaactccaaaagcaggcagaac
cagctgaatggcaccacctccagtaagcacggaaaacctgcagtctgtaagaggccaata
gctactctacaacacactgccacagtccctcatcctcacccatctccagagcctcaggac
actggtgaccttgagaccacatgcccaatatgcggagtgttctttactgcagagtatctg
ccgctccacgccgcctcctgccagcaggtggcgaccaggaagctccctggggggattgtg
acccctgttccacgccccttccctgtctctcccgccagcctagaggagtccatggtgccc
tgccctctctgctccttcaagttctctctgtcccacatccagatgcacgccagcacctgt
ggagaccccgtggacccccatgttatctgggtggactag

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