Oncorhynchus nerka (sockeye salmon): 115135831
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Entry
115135831 CDS
T07952
Name
(RefSeq) serrate RNA effector molecule homolog
KO
K27103
serrate RNA effector molecule
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115135831
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
115135831
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
115135831
NCBI-ProteinID:
XP_029526813
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Position
LG10:44240732..44252958
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AA seq
922 aa
AA seq
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MADSDDEYDRRRRDKFRRERSDNYDRSREREERRRDDWNDRRPSAREWDRGRERRSRGEY
RDYERGRRERFSPPRHDMSPQQKRMRRDWDDHGGDPYHGGYDLGYGGGGGPSYAPPQPWG
HPDLHLMQPHHGIPIQARLGNIHDMDLGLPPPVMKSFKEFLLSLDDSVDETEAVKRYNEY
KIDFRRQQMQDFFLAHKDEEWFRSKYHPDEAGRRKAEAHSGLQNRLNVYIFLMENSWFDT
VSLDMEKAQAIMKVLDAAVIKMEGGTDHDLRILELPSEEEEERERADRAAAVGPGTEPPK
KEEPKDKNQDNDRKPPADKENGESDACSTEKGANGGGEAAAEGSGGEEKGEKEVKSKEVV
PEPKKLSKKRKRKHSGDSEDEASASESDSDSDSNSHHSSDKNAEKEDEGEEKEEGEDKDD
EEKEEGEDKDEEEEEGEADGKKSKEEKPKERAREREKPEEKKPKEDQPLRPRPLHRTCSL
FMRSIAPTISKAEIIALCRRYPGFMRVCLSDPQPERRFFRRCWVTFDRSVNIKETCWNLQ
NIRLRDCELAPGVNRDLARRVRNINGITQHKQVLRNDIKLSAKLIHSLDDRGRLWSQKAR
GDNVSAVEMAAQNPILKNITDYLIEEVSAEEEELLGSVGGADAEEGSKEGNPAEITVERD
DTLVKVLDRLLLYLRIVHSIDYYNNCEYPSEDEMPNRCGMIHVRGPIPPNRITHGEVLEW
QKTFEERLSPLFSVKEKLSEEEAGKMGRKDPEHEVEKFVSANTQELGKDKWLCPLSGKKF
KGPEFVRKHILNKHGDKIDEVKKEVVFFNNFLMDAKRPSLPEMKPPPPPGPGQGVLSPGM
PFPPQGLMGFGPGQPRPPVMGYGGGPPYPPNQYGGGRGNYDNFRGQGGGYPGKPRNNRMS
RGDPRNIIEYRDLDAPDDMDFF
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagtgatgatgaatatgatcgcagaaggagagacaagttccgtcgtgagagg
agcgacaactatgaccgctcccgagagagagaggaaaggcgtagggatgactggaatgac
aggcgcccatctgcaagggagtgggacaggggcagggagcggcgtagccggggggagtat
cgggactacgagagaggtcgcagggagaggttctccccacccaggcacgacatgagtccc
caacagaaacgcatgaggagagattgggatgaccatggaggagatccctaccatggtggg
tatgacttgggctacggtggtggcggaggccccagctatgcccctccacagccttggggc
caccctgaccttcatctcatgcagcctcaccatggcatacccatccaggcaaggctagga
aacatccatgatatggatctgggcctgccacctccggtgatgaagagctttaaggagttc
cttctgtccctggatgactctgtggatgagaccgaggcagtcaaacgttataatgagtac
aagatagacttccgacggcagcagatgcaggacttcttccttgcgcacaaagatgaagag
tggttcagatccaaataccacccggatgaggcgggccggcggaaggctgaggcccacagt
ggcttgcagaaccggctgaatgtctacatattcctgatggagaacagctggttcgacacc
gtctccctggacatggagaaggcccaggccatcatgaaggtcttggatgcagcggtgata
aagatggagggagggacagatcatgacctgcgtatattggagctgccgtctgaggaggaa
gaggagagggagagagctgacagggcggcagctgttggtcctggaactgaaccccccaaa
aaagaggagcccaaggataagaatcaggacaatgaccgcaaacccccagctgacaaagag
aatggggagagtgatgcctgcagcacggagaagggggcaaacggtggtggtgaagcagca
gcggaagggagtgggggagaagagaaaggagaaaaagaggtgaaaagcaaagaagttgtg
cctgagcctaagaagctgagtaagaagaggaagcggaagcacagtggagacagtgaagat
gaggccagtgcctctgagagtgactccgattcggactccaactcccatcattcctctgat
aaaaatgcagagaaggaggatgagggtgaggaaaaggaggaaggggaggacaaggacgat
gaggaaaaggaggagggggaggacaaggatgaagaggaagaagagggtgaagctgacggt
aagaaaagcaaagaggagaaaccaaaggaaagggcgagagagagggagaaaccagaggag
aagaaacccaaggaggaccagcccctgagacccaggcctctccacaggacctgctcttta
ttcatgaggagcatcgcccccacaatctccaaggctgagatcatagctctatgtcggaga
tatcctgggtttatgcgagtgtgcttgtctgatccccaaccggagcgcaggttcttccga
cgctgctgggtgacgtttgaccgtagcgtcaacatcaaggagacctgctggaacctccag
aacatcagactgcgtgactgtgaactggccccgggggtgaacagagacctagcccggagg
gtccgcaacatcaatggcatcactcagcacaaacaggtgctgcgcaatgacatcaaactg
tcagccaaactcatccactctctggacgacagaggcaggctgtggagccaaaaggcccgg
ggagataatgtgtctgctgtggagatggcggctcagaaccccatcctgaagaacatcact
gactacttgatagaggaggtgagcgctgaggaggaggagctactgggcagtgtgggcgga
gctgatgcagaggagggcagcaaggaggggaacccagccgagatcactgtggagagggat
gacacgctggtcaaggtgttggaccgtcttctcttgtacctgcgtattgtccattccatt
gactactacaacaactgcgagtaccccagcgaggatgagatgcccaaccgctgtggcatg
atccatgtgcgtgggcccatccctcccaaccgcatcacacatggggaagtgttggagtgg
cagaagacatttgaggagaggctgagccccctgttcagtgtgaaggagaagctatcagag
gaggaggcaggcaagatgggccggaaggacccggagcatgaggtggagaagtttgtgtcg
gcaaacacccaggagctgggcaaggacaagtggctctgccccctcagtggcaagaagttc
aagggcccagagtttgtgcgcaagcacatcctgaacaaacacggggacaaaattgacgag
gtgaaaaaggaggtggtgtttttcaacaatttcctcatggatgctaagcgaccttccctc
ccggagatgaagccgcctcctccgcctggcccaggacagggagttctttctccaggcatg
cccttccctccccagggcctcatgggcttcggtcccggccagcctcgtcctcctgtcatg
ggttacggaggtggacctccttacccaccaaaccagtatgggggcggtcggggtaactat
gacaacttccgtggacagggtggtggctaccctggtaaaccccgcaacaacagaatgtct
cggggagatccacgcaacatcattgaataccgtgacctggatgcacctgatgacatggac
ttcttctag
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