Oncorhynchus nerka (sockeye salmon): 115135846
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Entry
115135846 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2-like isoform X1
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115135846
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115135846
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
115135846
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
115135846
NCBI-ProteinID:
XP_029526838
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All DBs
Position
LG10:complement(44926796..44972752)
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AA seq
316 aa
AA seq
DB search
MSRPSSAGGGGGGLGSGKAGGGKHGGSGGAAASAAAAGVGAVAGSGSALPVAAVALPSAS
LHGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIRNLA
MEKVASTLPFPCKYASAGCLLSLHHSEKPDHEEVCEFRPYTCPCPGASCKWQGSLEAVMP
HLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFF
AVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSIAHL
FADNGNLGINVTISMC
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcccgtcctctgcgggcggtgggggcggaggactcggttccgggaaagcaggc
ggaggaaagcacggcggttcggggggagctgctgcctcagctgcagccgctggagtagga
gctgtggccgggtctggctcggctctacctgtcgctgctgttgccttgccctcagcatcg
ctacatggacaatctgctgaacttacagccttgttcgagtgcccggtttgttttgactac
gttctgccaccgattctgcaatgccaggccggacatcttgtttgcaaccaatgtcgtcaa
aagctgagttgttgtccgacttgtcgcggccctctcaccccgagtatcaggaacttggct
atggaaaaagttgcttctactctaccgtttccttgtaagtatgcgtcagccggatgcctg
ctgtccctccaccacagtgagaagcctgatcacgaggaggtgtgtgagttccgtccctac
acctgcccgtgccccggggcctcctgcaagtggcagggctccctggaggccgtcatgccc
cacctgatgcacgcccacaagtccatcaccaccctgcagggagaggacatcgtcttcctg
gccacagacatcaacctgccgggggccgtggactgggtcatgatgcagtcctgcttcggc
caccacttcatgctggtcctggagaagcaagagaagtacgagggccaccagcagttcttt
gctgtggtgctgctcatcggaacgaggaagcaggccgagaacttcgcctaccgcctggag
ctcaacgggaaccggcggcgcctcacctgggaggccacgccccgctccatccacgacggc
gtggcggccgccatcatgaacagcgactgtctggtgtttgacacgtccatcgctcacctg
ttcgccgacaacggcaacctggggatcaacgttaccatctccatgtgctga
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