Oncorhynchus nerka (sockeye salmon): 115135865
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Entry
115135865 CDS
T07952
Name
(RefSeq) integrin beta-2-like isoform X1
KO
K06464
integrin beta 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04145
Phagosome
one04514
Cell adhesion molecules
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115135865
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115135865
09142 Cell motility
04810 Regulation of actin cytoskeleton
115135865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115135865
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115135865
04515 Cell adhesion molecules [BR:
one04515
]
115135865
04090 CD molecules [BR:
one04090
]
115135865
Membrane trafficking [BR:
one04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115135865
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115135865
Cell adhesion molecules [BR:
one04515
]
Integrins
Integrin beta subunits
115135865
CD molecules [BR:
one04090
]
Proteins
115135865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_integrin
vWA_SIBA-E
I-EGF_1
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
115135865
NCBI-ProteinID:
XP_029526911
LinkDB
All DBs
Position
LG1:9457689..9472446
Genome browser
AA seq
784 aa
AA seq
DB search
MTLEMYPCVSLLLLLMGRGAIPLVLSEEVKCSKTVINSCSDCIKSGAYCTWCKQLNFIKP
GEQEAARCDTWAQLIERGCMEEDIISPKNDFSSSKNISLSNTALDKGEPIQLRPQEVNLK
LRPGLPHTFTLDFQRVEGYPVDLYYLMDLSYSMEDDLRSIKTLGNELFNALQSITKKGRI
GFGSFVDKTVLPFTNTNPEKLNKPCAETEMYCQPAFGYRHVLSMTENKAAFEREVNKQRI
SGNLDSPEGTLDAIMQAAVCGERIGWRNSSTRLIVLTTDDGFHMAGDGKLAGILEPNDER
CYMDNNLYSKSNEMDYPSVGQVANQLEKNNIQPIFAVTKNMEKVYRELSKMIPKSEVGVL
SADSHNVVELIKNAYNRLSSKVTVTHDALLDNVRVTYTPLCPEGGPSGDKGVCNNVGVGQ
MVSFNVTVTADECVQSEMSFLIGPLGMKDKLKVSLSTLCKCECDDPVLVDSSYCNGKGQV
NCGMCSCKAGFVGQKCECSIGDKDESSLRAACRKDNGTECEGRGDCVCGICQCYTLPGGS
TYYGTNCECENESCEKFQNKLCGGNGKCRCKNCECKPGYEGTACQCKKSDEQCRTPSGSV
CSGRGTCKCNQCKCMEGYQRPYCLTCPACQSTCITKGKCIECLGFQTGPFSKNCSQACTS
ISEFKMVETLPPGKPCDVRDVESCRVFFAIKQLDGEDNYIAQILKTRECPKLPNIYAIIG
GSIVGVTVIGILILLFIKVFFTLKDLKEYRKFRNDAQKTKWSDNKNPIFQEATTTVANPT
FSGE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgaaatgtatccgtgtgtgtctctcctgctcctgctgatgggcagaggtgcc
attcccctagtgctctccgaggaggtgaaatgttccaaaacggtgatcaactcctgcagt
gactgcatcaaatcaggagcgtactgcacgtggtgcaaacaactgaacttcatcaaacca
ggggagcaggaagcagctcgctgtgacacctgggctcagctcatagaaaggggctgcatg
gaagaagacatcatatctcccaagaatgacttttcttcttctaagaacatctccctgtcc
aacactgcattggacaagggggaacccatccagctccgtcctcaggaggtcaatctgaag
ctcagaccaggactgcctcatacattcacgctggactttcagagagtggagggctatcct
gttgatctctactacctgatggatctctcctactccatggaggatgatttgaggagcatc
aagactctgggaaacgaactgtttaacgctctgcaaagcatcacaaaaaaaggacgaatc
ggttttggctcttttgtagacaagactgtcctgccgttcaccaacaccaacccagagaag
ctgaataagccatgcgccgaaacagagatgtactgccaacctgcttttggctacagacat
gttcttagcatgacggaaaacaaagctgcgtttgagagagaggtcaacaagcagcggatc
tctgggaacttagactcccccgaagggacgctggacgccatcatgcaggctgcagtctgt
ggggaaaggattggctggaggaatagcagcactcggcttatcgtcctgaccaccgacgat
ggcttccacatggcaggggatggcaagctggctggcatactggagcccaatgatgagaga
tgttacatggacaataacctgtacagcaagagcaatgaaatggactacccatctgttggt
caagtggctaatcagttagagaagaacaacattcagccaatctttgctgtgacgaagaac
atggagaaggtatacagggaactcagtaaaatgatccccaagtctgaggtcggagtgttg
tccgctgactcccataatgtcgttgaactgatcaaaaatgcctacaacaggctctcctcc
aaagtgacggtgactcatgatgctctccttgacaacgtgagagtcacttacactccactc
tgtcctgaagggggaccctcaggggacaaaggagtgtgtaacaatgtgggagtgggacag
atggtgtctttcaatgtaacagtgacagcggatgaatgtgtgcagagtgaaatgtctttc
ctgattggtccgttgggtatgaaggacaagctgaaggtgagcttgtcgactctctgcaag
tgtgagtgtgacgaccctgtgctggtcgattcctcgtactgcaacgggaagggccaagtc
aactgtggcatgtgcagttgcaaagccggcttcgtgggccagaagtgtgagtgctccatc
ggggataaggacgagagctctctgagagcggcgtgccggaaggacaacggcacggagtgt
gaaggacgaggggactgtgtgtgtggcatttgccagtgctacaccttaccaggtggcagc
acctactacggcacgaattgcgagtgtgaaaacgagagctgcgagaagttccagaacaaa
ctgtgtggagggaacggaaaatgccgttgcaaaaattgcgaatgcaaacccgggtacgag
ggcaccgcctgccaatgcaagaagtcggacgagcagtgtcgcacaccaagcgggagtgtg
tgcagcggcaggggcacgtgcaagtgtaaccagtgcaagtgtatggagggctaccagcgg
ccctactgtctgacctgtcccgcctgccaatccacctgtataaccaaggggaaatgcatt
gagtgtctgggctttcagacaggcccattcagtaagaactgctcccaggcctgtacgagt
attagtgaattcaagatggtggagacgttgccacctggtaagccttgtgatgtgagggat
gtggagagctgccgggtgttctttgccattaaacagttggacggagaggacaactacatc
gcccaaatactaaagaccagagagtgtcccaagttgccaaacatctatgccatcattgga
ggctccatcgtaggcgtgactgtcatcggaatcctgatcctgctcttcatcaaagtcttc
ttcacattgaaagacctgaaggagtaccgcaagtttaggaatgacgcgcagaaaaccaag
tggtcagataataagaatccaatattccaggaggcaaccaccaccgtggctaaccctacc
tttagtggagaatga
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