Oncorhynchus nerka (sockeye salmon): 115135881
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Entry
115135881 CDS
T07952
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25-like isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115135881
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115135881
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115135881
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115135881
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115135881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UIM_2
UBA_4
vMSA
Med13_C
Motif
Other DBs
NCBI-GeneID:
115135881
NCBI-ProteinID:
XP_029526900
LinkDB
All DBs
Position
LG10:46211585..46269213
Genome browser
AA seq
1181 aa
AA seq
DB search
MTVEQNVLQQHSQKHQQTLLNQLREVTGTTDVQLLQQALQVSHGDLAEAVAFLTEKKAKV
PQQDEATYYQTTQVGNDRYISVGSQADTSEYLPHPALPGAGPSQGDTNVIDLTGDDKDDL
QRAIALSLEESSRAFRETGITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHDRK
RMENCPVGLKNVGNTCWFSAVIQSLFNLLEFQRLVLHYSPPATVQDLPRNQKEHRNLPFM
QELRNLFSLMVGSKRKYVDPSCAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQMKA
EEDREGEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMI
EGEIESLHSSAENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHSKLEFPSMLY
MDRYMDRNREITRIKREEIRRLKEHLTLLQQRLERYLSYGSGPKRFPLADVLQYAMEFTS
SKPVCTSPVGDFDTSAPPGGTTGQLLPASSTAEQGPSTPPEGLALALALTPAPSTQQRVP
IHKPFTQSRLPPDLPMHPAPRHITEEELRVLECCLHRWRSEVENDTRDLQGSISRIHRTI
ELMYSDKSMMQVPYRLHAVLVHEGQANAGHYWAYIYDPHQRCWMKYNDISVTKSSWEELV
RDSFGGYRNASAYCLMYINDKKPFLIEEEFNKETGQMLSGLDKLPPDLKAYVKEDNGLFD
KEMEEWNTLQARKAQQEKLALAVATAATAVVAETTATTTSSQPMSTEPSTPDNSAPQQDP
EYMEQPSPTDYSRHLQEDTERAISKAAAEQQEERSPEGLLTALSPQSCGESVSPRLPPQP
EIKVNPETPLVPPSDPPVKDKPPAHRIVEVAIPQAMMTPNMQGIIMSIGKARTVFEKLGP
EAAFFKAIKVEYTRLLRFAQEDTAPGSDYRLQHVIVYFIQNQAPKKILERTLLMQFADRN
LGFNERCKSIMKVARAKLDLFKPEEINMEEYEMWHQDYRNFRETTIFLMIGLELFQKKSF
VEALMYLIYSYQYNRELLVKGLYRGHDDELIGLYRRECLLKLNENAAGMFESGEEPEVSN
GLSIMNELVVPCIPLLLVHDIDEDLLSVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLD
CSTEIKSFHDPPKLPTYSTLELVERYSRVISSLSRVPADGR
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagcagaatgtcctccaacagcattcgcagaagcatcagcagactctactg
aaccagctgagggaggtcacaggcaccacagacgtacagctacttcagcaggccctgcag
gtcagtcatggagacctggcggaggcggtggcctttctgacggagaagaaggccaaggtg
ccccagcaggatgaggccacctactaccagaccacccaggtgggcaacgacagatacatc
agcgttggcagccaggcagacaccagtgagtacctacctcacccagcgctgcccggggca
ggccctagccagggagatactaacgtgattgacctgacaggcgatgacaaggatgacctc
cagagggccatcgctctcagcttggaggagtccagccgggccttcagggagacgggcatc
actgatgaggagcaggccatcagcagagttctggaggccagcatagcagagaacaaggca
agcctaaagcggacacacacggaagtgtggagtgactcgcccaatccccatgacaggaag
agaatggagaactgccctgtgggtctaaagaacgtgggcaacacctgctggttcagcgcc
gtcatccagtctctgttcaacctgctggagttccagaggctggtgctacactactcccct
cctgccacagtccaggacctgcctcgcaaccagaaggagcacagaaacctacccttcatg
caggagcttaggaacttgttctccctcatggtgggttctaagaggaagtacgtggacccg
tcttgtgccgtggagatcctcaaggacgccttcaagtccagcgagtctcagcagcaggat
gtgagtgagttcacacacaagctgctggactggctggaggatgccttccagatgaaggca
gaggaggaccgagagggtgagaagccaaagaacccgatggtggagctgttctatggccgg
ttcctggctgttggtgttctcgaaggaaagaagtttgagaacactgagatgtttgggcag
taccccctgcaggtgaacggctttaaggacctgcatgagtgtctcgaggcggccatgatt
gagggggagatcgagtccctgcactcatcagcagagaactctgccaagtctggacaggag
cactggtttaccgaactccctcctgtcttgaccttcgaactgtcaagatttgagttcaac
caagctttgggtcgacctgagaagatccacagcaagctggagttcccctccatgctgtac
atggacaggtatatggacaggaaccgagagatcaccaggattaaacgggaggagatcagg
agactgaaagagcacctgactctactccaacagcgtctggagaggtatctgagctatggc
tccggccccaagaggtttcctctggcagatgtcctgcagtacgccatggagtttacttcc
agtaagccagtctgcacctctcctgtgggggactttgatacatcagcaccccctggtggc
acaacagggcaactgctgcccgcttcaagcacagccgaacagggtccctctacccctcca
gagggtttggccctcgccctggctctcaccccggccccctccacccagcagagagtgcct
atccacaagcccttcacccagtcccgactgccccctgacctgcccatgcacccggcccca
cgacacatcactgaggaggagctccgggtgctggagtgctgcctgcaccgctggaggagt
gaggtggagaatgatacccgcgatcttcagggcagtatatccagaatccacaggaccatt
gagcttatgtactctgacaagtccatgatgcaggttccgtaccggctgcatgcggtgttg
gtgcatgagggccaggccaatgctggacactactgggcctacatctatgacccccaccag
cggtgctggatgaagtacaacgacatctcagtcaccaagtcctcctgggaggagctggtc
agggactcgttcggaggctatcgcaacgccagcgcctactgcctcatgtacatcaacgac
aagaagcccttcctcatagaagaggagtttaataaggagacgggccagatgctgagtggt
ctggataagctccccccagacctgaaggcctacgtgaaggaggacaatggcctctttgac
aaggagatggaggagtggaacacactgcaggcacgcaaggcccagcaagagaagctggcc
ctggctgtggccaccgccgcaaccgctgtagtagcagaaacaacagcaacaacaacgtcc
tctcagcctatgagtacagaacccagtacaccagacaactcggctccacagcaggaccca
gagtacatggagcagccgtcccccacagactactccaggcacttgcaggaggacactgag
agggccatctccaaagctgcagccgagcagcaggaggagaggagcccagagggactgctt
actgcactctctccacagtcctgtggggagagtgtctccccacgccttcccccccagcct
gagatcaaggtgaaccctgaaacccctctcgtgcctccttctgacccccctgtgaaggat
aagccccctgcccaccgtattgtagaggtggccatcccccaggccatgatgactccaaac
atgcagggtattataatgtccattggcaaagcaaggactgtgtttgaaaagcttgggcct
gaagcggccttcttcaaggccattaaggtggagtacacccgtctgctgaggtttgcccag
gaggacacagccccggggagtgactaccgactgcagcacgtcatcgtctacttcatccag
aaccaggcccccaagaagatcctggagagaaccctcctcatgcagtttgccgaccgaaac
ctgggctttaacgaacggtgtaagagcattatgaaagtggcgcgtgccaaactagacctc
tttaagccagaggagatcaacatggaggagtatgagatgtggcatcaggactacaggaat
ttccgcgagacaacaatcttcctgatgattggcttggagctgttccagaagaaaagcttt
gtggaggcattgatgtacctgatctactcataccagtacaacagagagctgttggtcaaa
gggttgtaccgaggtcacgacgatgagctcatagggctctaccgcagagagtgcctgctg
aaactgaacgagaatgcggcggggatgtttgagtctggtgaggagccggaggtgagcaac
ggcttgagcatcatgaatgagctggtggtgccatgcatccccctattgctggtccacgac
atagacgaggacctgctgtctgtggaggacatgaggaaccgctggtgctcctacctggga
caagaaatggagcctaaccttcaggagaagctgactgacttcctccccaagttactcgac
tgctcaacagagatcaaaagcttccacgaccctcccaagctgcccacctactccacccta
gagctggttgagcgctacagccgtgtcatttcctccctgagccgggtgcctgcagacggg
agatga
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