Oncorhynchus nerka (sockeye salmon): 115135884
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Entry
115135884 CDS
T07952
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115135884
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115135884
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115135884
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115135884
Intermediate filaments
Intermediate filament-binding proteins
115135884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
PH_4
Motif
Other DBs
NCBI-GeneID:
115135884
NCBI-ProteinID:
XP_029526906
LinkDB
All DBs
Position
LG10:complement(46503930..46529436)
Genome browser
AA seq
1624 aa
AA seq
DB search
MLMGAGRDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQELIDEKPELRSVVQ
QKLEEIRECWTDLESTTKAKARALFENNKPEPVVKSYSDLDHQLSGLEKQPPQLEQAHHL
PTFNEQLQKFQSQMGNMYKDVGELGSLQGVCLPQRGSLVKGGEGEGGEQPAVVETRIVRL
IEPLKERRRILLASKEMHQVAQDLEEEILWIQERLPLASSKDYGNNLQSVQQHVKINQTL
QRDLQGRQARVEEVLDRAGIIASLRTPEVDFVREGAGHVRQVWEVLRLEAERRSVMLDVV
LLAQQYYSEAAKVESWLAGQKLHLINEEKGTDEESTLQLLKEHLALEATVENYAETVGML
SQQCQQQLELGHPDSEGITKQQSHIDRLYVSLKDMVEHRKTKLEQQYWMYQLNREVEELE
KWITEREAVASSTELGQDLEHVTLLQEKFTKFCSETNSIGQQRMEQVNKMVNEMIDCGHT
DAATIAEWKDGLNESWADLLELMETRRQMLAASHQLHKFFTDCKEVLAQTAGKMRQLPEV
RACQASIANPATLQRLMLSFEHALQLLVSQVRQLQENAAQLRTIYAGEKAEAIMSKEQEV
MSAWKELLVSCEASRVQVTSVTDKVQFFSVVREQLMWMEGIMGQIGGDDPRDSSSAEVMM
KQHGELKAKMDGRRKTIQQCVELGKILLAAGNPASEEIKEKLDALLAKQKDLSERWDKQQ
EKLQRKKDQFQYAQETVKAEAWLKAKEPLISSSSSSRVAGGAGGDTQVQTDEVEQLILRH
EAFRNAAATWKERFSSLRQLSNAEKLREEQSSKPSPMPLSSRRMFPSSCLTPTIPLATST
LLRQTVQVHIEPRPKQTSLEMSASASSAAQRLGSTIASYAPVINGSGYHGLDNQSSSGGL
ESSNYPGLNHPGSGGVDSSSSYLGGNHQTGSPPVDSSGYLGLNQQNSGGMVSPGYLPQNQ
SSGGMCGPGYLPQNQSSGSIGSPGYLPQNLSSGSMGSPGYLPKNQSIGGMCSPGYLSQNQ
SSGGMGSPGYLPQNQSSGGMGSPGYLPQNQSSGGMCSSGYLPQNQSSGGIGSPGYLPQNQ
SSGGMGSSGYLPQNQSSGGIGSSGYLPQNQSSGGMGSSGYLAQNQNSVGIGSSGYLGKNQ
SSGGMGSTGYLAQHQGSGSMGSSGYLAQSVGGMGSSSYLPQSGGVMDPKMAYAWQHLKAD
CMQPRINHMHKAVNPLLEASRAQREQFGDIPMVDMIGPESGLDLLHGRLQRDPRGSRSDP
QMDHLRREREYKLGRQTSSEQEIQARLNELPMIVRQERYRRRLERQSSSEQEGSGKARTP
RQDDSSDMESAKEGSDKRSIEKRATTMAEIVEQAQEREAAQARGEMYRPTSSLSAPVTYE
RPRARDRPKPRRRPRPKEPEEKRRSRSAPAQSPAQLLPPSHTAHNEGFLYRKHDFEGHQK
SPSSKSWVNLYCVLTKGGITFYKDAKSTTTPYNEETPLDLSVCICDSTIGYKKKKNVFVI
KKNDGNDYIFHAKDEEDLKAWVTNITTSITEHEEIAKWDKPTTSSTDPDRSERKEKSEGD
ADARSERSEMGGEVEEEERSEKERSEKGEGSKKTGEGSEKADTSERGERAEGGAGGSSTS
GKSK
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgggtgcgggacgagacacggcgcgggatgaggcccagaagcttcacaggaag
tggctgaagcaccaggccttcatggccgagctggcccgcaacaaagaatggctggccaag
atagagcaggagggccaggagctgatcgatgagaagccggagctgcgttcggtggtgcag
cagaagctggaggagatcagggagtgctggactgacctggagagcaccaccaaggccaag
gcccgggctctgtttgagaacaacaagccagagccggtggtgaagagctactcagacctg
gaccaccagctctctggcctggagaaacagcccccccagctggagcaggctcatcaccta
cccaccttcaacgagcagctgcagaaatttcagtctcagatggggaacatgtacaaggac
gtaggggaactagggtccctccagggggtgtgcctcccccagcgaggcagcctggtgaag
ggtggcgagggagaagggggcgagcagccagccgtagtggagacccgcatcgtgcgcctc
atcgagcccctgaaggagagacgacgcatcctgctggcctccaaagagatgcaccaggtc
gctcaggacctggaggaagagatactgtggatccaggagcggcttcctctggcctcctct
aaggattacggcaacaacctgcagagtgttcagcagcatgtcaagatcaaccagacactg
cagagggatctgcaggggcgccaagcacgggtggaggaggtgttggaccgggcggggatc
atcgcctctctgcggacccctgaggttgactttgtgcgtgagggggcggggcatgtgcgt
caggtgtgggaggtgctgaggctggaggcggagaggaggtctgtgatgctggatgtggtg
ctgctggcccagcagtactacagcgaggcagccaaggtggagtcctggctggcaggccag
aaactgcacctcatcaatgaggagaagggcacggacgaggagagcaccctgcagctgctg
aaggagcacctggccttggaggcgacagtggagaactacgctgagacagtgggcatgctc
tcccagcagtgtcagcaacagctggagctggggcacccagatagtgaggggatcaccaag
cagcagtcccacatagaccgtctgtatgtgtctctgaaggacatggtggagcacaggaag
accaagctggagcagcagtactggatgtaccagctcaacagagaggtggaggagttagag
aagtggatcactgagagggaggccgttgccagctccactgagctgggtcaagacctggag
catgtcacgttgctacaggaaaaattcaccaagttctgctcagagaccaacagcataggc
cagcagaggatggagcaggtgaataagatggtgaatgagatgatagactgtggccacacg
gacgcggccaccatagctgagtggaaggacggactgaacgagtcatgggccgacctactg
gagctcatggagacccgaagacagatgctggcagcatcacaccagctgcacaagttcttc
accgactgcaaagaggtcttggctcagactgcagggaagatgaggcagttgccagaggtg
agggcgtgccaagccagcatcgccaaccctgccaccctgcagaggctcatgctctccttc
gagcacgccctccagctgctcgtctcacaggtaaggcagctacaggaaaatgcggcccag
ctgaggaccatctatgccggagagaaggctgaggccatcatgagcaaagagcaggaagtg
atgtcagcatggaaggagttactggtttcctgtgaggccagtcgtgtgcaggtcacctcg
gtgacagacaaggtgcagttcttctcggtggtgcgcgagcagctcatgtggatggagggc
atcatgggacagattggaggggacgaccccagggactcgtcttctgcagaggtgatgatg
aaacagcatggtgagctgaaagccaagatggatggccgtaggaagacaatacagcaatgt
gtggagctgggaaagatcctgctggccgcaggcaacccagcctccgaggagataaaggag
aagttggatgcgctcctggctaagcagaaggatctctctgagagatgggacaaacagcag
gagaagctacagcgcaagaaggatcagttccagtatgcccaggagacggtgaaggcagag
gcctggctgaaggccaaggagcccctgattagctccagctcctcctctagggtggctggg
ggggctggaggagacacccaggtccagactgatgaggtggagcaactcatcctccgccac
gaggccttccgcaatgctgcagccacctggaaggagcgcttcagctcactgagacagctc
tccaatgcagagaagctgagagaagaacagagcagcaagccttccccaatgccactctcc
agtcggaggatgttcccatcatcctgtctcactccgaccattcctcttgctacctcaact
ctgctgagacagacggtccaggtgcatattgagcccaggcccaagcagaccagtctggag
atgtctgcctctgcctcctctgcagcccaaaggttgggttctaccatagccagctacgct
cctgtcataaatggctctggttaccatggactggacaatcagagcagcagcgggggattg
gagagttccaactaccctggactgaaccatccgggcagtggaggagtggacagcagctct
agttaccttggagggaaccatcagactggctccccgccagtggatagttctggctacctt
ggactgaaccaacaaaacagtgggggtatggttagtccaggctacctacctcaaaaccaa
agtagtgggggtatgtgtggtccaggctaccttcctcaaaatcaaagcagtgggagtata
ggtagtccaggctacttgccgcaaaatctaagtagtgggagtatgggtagtccaggctac
ctgccaaaaaatcaaagtattgggggtatgtgtagtccaggctacctgtcgcaaaatcaa
agtagtgggggtatgggtagtccaggctacctgcctcaaaatcaaagtagtgggggtatg
ggtagtccaggctacctgccgcaaaatcaaagtagtgggggtatgtgtagttcaggctac
ctgccgcaaaatcaaagtagtgggggtataggtagtccaggctacttgccgcaaaatcaa
agtagtggtggtatgggtagctcaggctacctgccgcaaaatcaaagtagtgggggtata
ggtagttcaggctacttgccgcaaaatcaaagtagtggtggtatgggtagctcaggctac
cttgcacaaaatcaaaacagtgttgggattggtagctcaggctaccttgggaaaaatcaa
agtagtgggggtatgggaagtactggctaccttgcacaacaccaaggtagtgggagtatg
ggtagttcaggctaccttgcgcaaagtgttgggggtatgggtagttctagctatctgcct
caaagtggtggggtcatggaccccaaaatggcatatgcgtggcagcatctgaaagctgac
tgcatgcagcccaggatcaaccacatgcacaaagctgtcaaccccctcctggaggccagc
agggcgcagagggaacagtttggggacatccccatggtggacatgatcgggccagagtct
ggcctggatctcctgcacggcaggctccagagggaccctcgcggcagccgctccgacccc
cagatggaccacctgcggcgggagagggagtacaagctgggtcggcagacctccagcgaa
caggagattcaggcgcggctcaacgagctgccaatgattgtgcgccaggagcgctatagg
cgacgcctggagaggcagtcgtccagcgagcaggagggcagtgggaaggcgaggacaccg
aggcaggacgactccagcgacatggagtcagccaaggaaggctctgacaagcgctcaata
gagaagagagccaccaccatggctgagattgtggagcaggcccaggagagagaggcagca
caagctcgaggggagatgtaccgccccaccagcagcctctcagcacccgtgacctacgag
cgcccgcgagcccgagaccgccccaaaccccgcaggagaccccgccccaaagagcctgag
gagaagcgacgctctcgctcggctccggcccagagcccggcacaacttctgccaccctca
cacactgcccataatgaaggcttcctgtaccgcaaacacgactttgaggggcaccagaag
agtcccagcagtaagtcctgggtgaatttgtattgcgtgttgacaaagggaggaatcact
ttctacaaggacgccaagagcaccaccacaccttacaatgaagaaaccccactcgacctg
agcgtctgtatatgtgatagcaccataggatacaagaagaagaaaaatgtcttcgttatc
aagaaaaatgatggcaatgactatattttccatgcaaaggatgaggaggacctgaaggct
tgggtcactaacatcaccaccagtataactgaacatgaggagatcgccaagtgggacaag
cccaccacctcgtccacagatcccgaccgctcggagaggaaggagaagtcggagggcgac
gcagacgccaggtcagagaggtctgagatgggaggagaggtggaggaggaggagaggtca
gagaaagagaggtctgagaagggagaggggtccaagaagacgggagaaggctcagagaaa
gcagacacgtcggagaggggtgagagggcagaggggggggcagggggctccagcacgtca
gggaagagcaaatga
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integrated database retrieval system
